TCONS_00067882-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067882-protein
Unique NameTCONS_00067882-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length634

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067882-protein ID=TCONS_00067882-protein|Name=TCONS_00067882-protein|organism=Clytia hemisphaerica|type=polypeptide|length=634bp
MSLVAAYSESESENESDQEQENPNEVKVETAKTTLNVHQADEKPPVEEER
TGFEIEDEDDWQTGDSVNTAQTTNLGGESSAEFFSKLPEPAAIESKSTAP
IKIEEEEDEFLKKKPSLEDKLFKKEQALLEKELNEKKKHGDKEDSKHFLS
KFTKGSGGGGGKKSKNQKVLISIPTLEDIGADSDSDEESYQPKQEPQKFM
ASKKSSALFAMLPKPKNSVTVSANKNRVFNREVNRPLVPHTVTKHKPQAK
DTSSKSTSINVNPERSVATGNSKVKNDVDSEESEDDDDVSATSFFSFGEK
NTTEKNTPMEMKPDEEVHNKKENNTKTENISMEIVNEVTSVKPKERETKI
EPKPNKPSSNNKDNSYFSTLFKSKTNSQTASVKTNKDISNDNDVRTSCTD
SNTKSSIQTSHGITAPYGHNSSDSSVTAPYGGNSSSVTAPYGSSNSAVTA
PYGSGNSAVTAPYGSGNSAVTAPYGSHNSISQQHQQMPQNHGYPTNATDN
TFFSYSHATSTSSSQQPAQASMDFYHQPNEDTPIDQEAMRALQGRKRRRG
EEINIIDVNAQDLQVDKDEYLKNLTVESGYKNKAPQDAGISSQQKRKHQI
TYLAFQAKEREFELRQSWADSRASKQQTQSKYGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042396XLOC_042396Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067882TCONS_00067882Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018800PRCC
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018800Proline-rich protein PRCCPFAMPF10253PRCCcoord: 404..634
e-value: 1.7E-14
score: 55.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..433

Blast
[Close]
BLAST of TCONS_00067882-protein vs. Swiss-Prot (Human)
Match: PRCC (Proline-rich protein PRCC OS=Homo sapiens GN=PRCC PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.675e-19
Identity = 48/106 (45.28%), Postives = 70/106 (66.04%), Query Frame = 0 
Query:  534 IDQEAMRALQGRKRRRGEEINIIDVNAQDLQVDKDEYL-KNLT----VESGYKNKAPQDAGISSQQKRKHQITYLAFQAKEREFELRQSWADSRASKQQTQSKYGF 634
            ID EA + LQG++ R  EEIN +++   D      +++ K+LT    ++S  K K  Q  G   QQ+RKHQITYL  QAKERE EL+ +W++++ S++QTQ+KYGF
Sbjct:  389 IDDEAFKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTG---QQRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF 491
The following BLAST results are available for this feature:
BLAST of TCONS_00067882-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRCC1.675e-1945.28Proline-rich protein PRCC OS=Homo sapiens GN=PRCC ... [more]
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