TCONS_00064646-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064646-protein
Unique Name	TCONS_00064646-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	537

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064646-protein ID=TCONS_00064646-protein|Name=TCONS_00064646-protein|organism=Clytia hemisphaerica|type=polypeptide|length=537bp
MVKKNGSITLTNEPVDGASGKEMVVGFTNKSYDKQGDGMSPDVSIKGFKK
VVNEKEDLEQATEGITVKRTVGLFGGISLIIGTMIGSGIFASAATVSKFS
GSVGMSFVVWAGSGMLAICGGLCYVELGLMLPESGGEYIYIKEALGDMCA
FLFVYVSNIVLKPASLSAICVAAGDYIVEPFLVYEHVAENQTLIVKLVAF
FFLTVLIIINCSSASLANQVQVVFTICKLAALAMIILTGIVRLGQGYTTN
FSEPFKGTSTHISDIGYAFYGGLWAYDGWNNLNYAVEELNNPLRNLPRSI
VFGLPLVIGLYMFVIIAYLTVMPFETLANSSAVGVVFGNEVYGVMHWIMP
VLVAASSFGAANGCAFTGGRLIFASARNKHMPEILAMLHKERNSPIPALI
FSYIIALIMILPESSNFGTLITYFNFVAWVTYGVTFGSLLWLRYKRPDLK
RPYKVFIGIPVVMVFCSLYLVIAPFASAPLESFFCLLFILSGIPFYFAFV
KYQIIPDKWLKKYDQLTQKIQKYLNVAMPASAEDICS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040553	XLOC_040553	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064646	TCONS_00064646	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1

Vocabulary: **Molecular Function**
Term	Definition
GO:0015171	amino acid transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0003333	amino acid transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 72..476 e-value: 4.8E-63 score: 213.4
IPR002293	Amino acid/polyamine transporter I	PIRSF	PIRSF006060	AA_transporter	coord: 50..525 e-value: 1.7E-77 score: 258.5

Blast

[Close]

BLAST of TCONS_00064646-protein vs. Swiss-Prot (Human)
Match: BAT1 (b(0,+)-type amino acid transporter 1 OS=Homo sapiens GN=SLC7A9 PE=1 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 5.095e-129
Identity = 208/488 (42.62%), Postives = 299/488 (61.27%), Query Frame = 0

Query:   49 KKVVNEKEDLEQATEGITVKRTVGLFGGISLIIGTMIGSGIFASAATVSKFSGSVGMSFVVWAGSGMLAICGGLCYVELGLMLPESGGEYIYIKEALGDMCAFLFVYVSNIVLKPASLSAICVAAGDYIVEPFLVYEHVAENQTLIVKLVAFFFLTVLIIINCSSASLANQVQVVFTICKLAALAMIILTGIVRLGQGYTTNFSEPFKGTSTHISDIGYAFYGGLWAYDGWNNLNYAVEELNNPLRNLPRSIVFGLPLVIGLYMFVIIAYLTVMPFETLANSSAVGVVFGNEVYGVMHWIMPVLVAASSFGAANGCAFTGGRLIFASARNKHMPEILAMLHKERNSPIPALIFSYIIALIMILPESSNFGTLITYFNFVAWVTYGVTFGSLLWLRYKRPDLKRPYKVFIGIPVVMVFCSLYLVIAPFASAPL-ESFFCLLFILSGIPFYFAFVKYQIIPDKWLKKYDQ-LTQKIQKYLNVAMPASAED 534
            K+  +EK    Q  +  ++++ +GL  GIS+I+GT+IGSGIF S  +V   + +VG   ++WA  G+LA  G LC+ ELG M+ +SGGEY Y+ EA G + A+LF + S IV+KP S + IC++  +Y+  PF V     +   ++VK +A   +  +  +N  S  L + VQ +FT  KL  +A+II++G+V L QG T NF   F+G    +  I  AFY GLWAYDGWN LNY  EEL NP RNLP +I+ G+PLV   Y+ + ++Y TVM    L  S AV V FG+ V     WI+P+ VA S+ GAANG  FT GRLI+ + R  HM ++L+ +   R +P PA+IF  IIA I I+P   N  +L+ YF+F AW+ YG+T   L+ +R+ R +L+RP KV + IPV+M   S++LV+AP  S P  E  +C+LFILSG+ FYF FV Y+     W +K  + +T  +Q  + V  P    +
Sbjct:    8 KRREDEKSIQSQEPKTTSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVG---CKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIPGDIN--SLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVLFILSGLLFYFLFVHYKF---GWAQKISKPITMHLQMLMEVVPPEEDPE 487

The following BLAST results are available for this feature:

BLAST of TCONS_00064646-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064646-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BAT1	5.095e-129	42.62	b(0,+)-type amino acid transporter 1 OS=Homo sapie...	[more]

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TCONS_00064646-protein (polypeptide) - C. hemisphaerica