TCONS_00063517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063517-protein
Unique NameTCONS_00063517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063517-protein ID=TCONS_00063517-protein|Name=TCONS_00063517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
MVQSSELSSYEKQRLQNIEDNKKMLESLGLLRSFKPILNPLVRKKPTERK
TRTAPPVKRKIADVVEHEETSSGVKFMRRRSLRVKGIEPDGTIVLPEEDK
EEYKPKPKPMHRENYFGAPDTAFHIGYYWETRMGCSADGIHRPTIAGIHG
NEAIGCYSIALSGGYEDDLDYGESFTFTGSGGRDLKGTKSNPKNLRTAPQ
SKDQMLDKMNLALSRNVESREPVRVIRGYKLQSPFAPEYGYRYDGLYTVE
KCWPSTGLSGFRVYKYVLKRVQDQPPPPWKEVEVIGGTSSDKENEDPCLI
DENGNIISKKNMKLMVENSTLENEGTVNEDFDDEKKKAAEPKSENEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039816XLOC_039816Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063517TCONS_00063517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003105SRA_YDG
IPR015947PUA-like_domain
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0042393 histone binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003105SRA-YDGSMARTSM00466G9a_1coord: 112..274
e-value: 1.7E-50
score: 183.8
IPR003105SRA-YDGGENE3D2.30.280.10coord: 128..312
e-value: 1.6E-61
score: 206.3
IPR003105SRA-YDGPFAMPF02182SAD_SRAcoord: 124..274
e-value: 6.0E-45
score: 152.5
IPR003105SRA-YDGPROSITEPS51015YDGcoord: 118..270
score: 46.212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..347
IPR015947PUA-like domainSUPERFAMILY88697PUA domain-likecoord: 106..282

Blast
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BLAST of TCONS_00063517-protein vs. Swiss-Prot (Human)
Match: UHRF1 (E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.390e-40
Identity = 85/185 (45.95%), Postives = 106/185 (57.30%), Query Frame = 0 
Query:  114 NYFGAPDTAFHIGYYWETRMGCSADGIHRPTIAGIHGNEAIGCYSIALSGGYEDDLDYGESFTFTGSGGRDLKGTKSNPKNLRTAPQSKDQMLDKMNLALSRNV---------------ESREPVRVIRGYK--LQSPFAPEYGYRYDGLYTVEKCWPSTGLSGFRVYKYVLKRVQDQPPPPWKE 281
            N++G P     +G  W  R+  S  G+HRP +AGIHG    G YS+ L+GGYEDD+D+G  FT+TGSGGRDL G K      RTA QS DQ L   N AL+ N                 S +PVRV+R  K    S +AP  G RYDG+Y V K WP  G SGF V++Y+L+R  D+P P  KE
Sbjct:  416 NHYG-PIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNK------RTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKE 593
The following BLAST results are available for this feature:
BLAST of TCONS_00063517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UHRF12.390e-4045.95E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens ... [more]
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