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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00063252-protein ID=TCONS_00063252-protein|Name=TCONS_00063252-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1243bp
MATESLAPEPMTREEAKRILRRLELDAYSAVVTAFRAQGDMNKSKKSILG
ELSNQLSISTERHRAEVRRVVNDDRLNDVAECMHGPGTSTEWGIEGCRLV
SLMPRLVPQTVFTAKATAAANQAAENNQKLPIKSEIEVLPLPTKVKGLPP
KSNHSDSKDDKSNAKSLLMNDLKHDDKLKKKKKSNILYTKPSPLALNKSL
SNPFKASSTSSAATSLKSMGKNTPLKYSTNTVTAKTTTIPLSSVSGAGYP
QKPIILQRSPSKGATGNTVRPQSTVSIQSASSSLNTNSPLASLSSSTTSK
IGEGPSLAQPMIKVVSNSQNVPVSVTGIGVNTANASITQKIKFKTPLPKP
KVKATKFKPLVPLQRSNILSSQSYGDSIVLGSTSATVTVTSTSPQKSVTP
SQGMSVKVVQVTKSSNVSSSTSLMNTLNKPVVVVSNGTSLKTPQKLTFSG
VPSSVTQQLKVISSTTASTSLTQALPKGTLTSKSMPLATGFKMIAVTTVV
PGTTQVKTVYIATPIMSLPKTVSQSSNSSITTAAPQNIRHISSSLASNLQ
SVVARSINTINNKSTNIQQQQQQQQPQQTSQPSSTMVTSISITKNNKLVT
QPKGLGSLKTTLAGTAQSLKLFTAVTKSRTPQTMTNVSKGTPLLPSTSML
TSPSTNTQVNNQRLLNSNSTSKISLDGAATNIRLRNDKPDSNGTFLNINT
VGLNAVPQIGNGPVHSNDNLGPITVTANTLEEVNATLNLLNDENNMTTEQ
ITATATGETDDMAFLNAGEKFLEQLSAKMTATSPDSLSSKTDTFLFPSNL
SLDMAEQNQPVFDVNEYDLSAAGNNVPSSIVIQNGIGAAKPAPALLAKDS
SNFFLSHKTGAISSPKLLNNILPTGAKVLQPNSNSLSIGTFSQNSIGHHQ
SPVMVNPVFQQNKNELSNNVQPPTILNYTNITNVSNKNEKDLSKVSFITV
GGAISGANSGQPSSSIVIDSSGVVVGSPVNKRLTSSLKMNTPQTANKLPM
SIPGSSKLNISPILNNMSGPLTVDGSMKNLSTTDVFQEQKKAQNVVNNIQ
FYLSPTSVQQQEGVGGCSSSVGNLVDDVRLNNNESNALTPQSDRKRKFGD
MQPPSARSPVSWVRSAANLLGRVSKFRGINKQKGDLNAASWFIKAVDPSE
EPGYYGIIKTPMDFTKIKRKLEDGEYESYTQFYDDMSLIKKNCYTYNPAN
HIARKDCDDVFNFFEGEYKKLLERWEKHHVSPQKRQRLEENGS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 730..750 |
| None | No IPR available | GENE3D | 1.10.110.10 | | coord: 391..668
e-value: 9.8E-4
score: 18.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 632..660 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 141..164 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 198..227 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 565..588 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1084..1107 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 249..304 |
| None | No IPR available | CDD | cd04369 | Bromodomain | coord: 1129..1218
e-value: 9.94573E-27
score: 105.917 |
| IPR001487 | Bromodomain | PRINTS | PR00503 | BROMODOMAIN | coord: 1151..1167
score: 47.7
coord: 1167..1185
score: 36.04
coord: 1185..1204
score: 34.13 |
| IPR001487 | Bromodomain | SMART | SM00297 | bromo_6 | coord: 1115..1223
e-value: 7.1E-21
score: 85.3 |
| IPR001487 | Bromodomain | GENE3D | 1.20.920.10 | | coord: 1112..1243
e-value: 1.0E-27
score: 96.0 |
| IPR001487 | Bromodomain | PFAM | PF00439 | Bromodomain | coord: 1137..1207
e-value: 9.8E-20
score: 70.3 |
| IPR001487 | Bromodomain | PROSITE | PS50014 | BROMODOMAIN_2 | coord: 1134..1204
score: 17.287 |
| IPR001487 | Bromodomain | SUPERFAMILY | 47370 | Bromodomain | coord: 1104..1228 |
| IPR005491 | ENT domain | SMART | SM01191 | ENT_2 | coord: 16..88
e-value: 2.2E-33
score: 126.9 |
| IPR005491 | ENT domain | PFAM | PF03735 | ENT | coord: 17..86
e-value: 1.2E-28
score: 98.8 |
| IPR005491 | ENT domain | PROSITE | PS51138 | ENT | coord: 16..100
score: 15.338 |
| IPR005491 | ENT domain | SUPERFAMILY | 158639 | ENT-like | coord: 11..122 |
Blast
BLAST of TCONS_00063252-protein vs. Swiss-Prot (Human)
Match: EMSY (BRCA2-interacting transcriptional repressor EMSY OS=Homo sapiens GN=EMSY PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.045e-41 Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 0
Query: 11 MTREEAKRILRRLELDAYSAVVTAFRAQGDMNKSKKSILGELSNQLSISTERHRAEVRRVVNDDRLNDVAECMHGPGTSTEWGIEGCRLVSLMPRLVPQTVFTAKATAAANQAAENNQKLPIKSE 135
++R+E KRILR+LEL+AY+ V++A RAQGD+ K KK +LGELS LSISTERHRAEVRR VND+RL +A M GP +S+EW IEG RLV LMPRLVPQT FT A A AN A ++N LP+ +E
Sbjct: 11 LSRDECKRILRKLELEAYAGVISALRAQGDLTKEKKDLLGELSKVLSISTERHRAEVRRAVNDERLTTIAHNMSGPNSSSEWSIEGRRLVPLMPRLVPQTAFTVTANAVANAAIQHNASLPVPAE 135
The following BLAST results are available for this feature:
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