TCONS_00060179-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00060179-protein
Unique Name	TCONS_00060179-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	497

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00060179-protein ID=TCONS_00060179-protein|Name=TCONS_00060179-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MTSCYVPRRYIMILFSHFGFFIVYALRVNLSVVLVAMVNSTYANVDNSDP
ECRSTDTNVTAAEYNGGEFNWNQNQQGIILSSFFYGYLLTQVPGGWLSMK
FGGKIVLGLGVLGTCVLTILTPLAARTSIYWLIVVRVLEGFGEGVTFPAM
HSLLAQWAPPEEISRMAVIAYSGMQTGTIVSLPLSGVLADSSFLGGWPSA
FYVLGAVGCVWFLFWMIFIYDGPENHPSISNVERLYITKSHNNSSSDTKS
TKIPWSHILTSRPVWAIMIGLFSHCWVWYMLLTGLPSYFSEVLDFKLKNN
GFLSALPYLSSFVVQQIGGWFADYLRKNWISTTAARRLAGILAFYPSAGF
LLLVSYAGCDQIALSVGYLVLAVTFITLNQIGLICSQVDIAPRYVGIIMG
LANSAGTIAGCITPSVTGYFTNEHPTREQYRKVFMIAASICVIGGTFCNV
FVSGELQPWNDIYHDEENFNGSDEEQVLINSSNSINDDELVDNYVRT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037855	XLOC_037855	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00060179	TCONS_00060179	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 6..236 e-value: 2.3E-36 score: 124.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 249..459 e-value: 4.5E-22 score: 77.8
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 19..414 e-value: 3.7E-61 score: 206.9
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 32..456 score: 23.692
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 68..452 e-value: 7.32449E-37 score: 138.216
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 68..452 coord: 7..39

Blast

[Close]

BLAST of TCONS_00060179-protein vs. Swiss-Prot (Human)
Match: S17A5 (Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2)

HSP 1 Score: 372.089 bits (954), Expect = 2.563e-124
Identity = 201/465 (43.23%), Postives = 284/465 (61.08%), Query Frame = 0

Query:    9 RYIMILFSHFGFFIVYALRVNLSVVLVAMVNSTYANVDNSDPECRSTDTNVTAAEYN--GGEFNWNQNQQGIILSSFFYGYLLTQVPGGWLSMKFGGKIVLGLGVLGTCVLTILTPLAARTSIYWLIVVRVLEGFGEGVTFPAMHSLLAQWAPPEEISRMAVIAYSGMQTGTIVSLPLSGVLADSSFLGGWPSAFYVLGAVGCVWFLFWMIFIYDGPENHPSISNVERLYITKSHNNSSSDTKSTKIPWSHILTSRPVWAIMIGLFSHCWVWYMLLTGLPSYFSEVLDFKLKNNGFLSALPYLSSFVVQQIGGWFADYLRKNW-ISTTAARRLAGILAFYPSAGFLLLVSYAGCDQIALSVGYLVLAVTFITLNQIGLICSQVDIAPRYVGIIMGLANSAGTIAGCITPSVTGYFTNEHPTREQYRKVFMIAASICVIGGTFCNVFVSGELQPW--NDIYHDEEN 468
            RY + + + FGFFIVYALRVNLSV LV MV+S     DN   +     +      +N  G ++ W+   QG IL SFFYGY++TQ+PGG+++ K GGK++LG G+LGT VLT+ TP+AA   +  LIV+R LEG GEGVTFPAMH++ + WAPP E S++  I+Y+G Q GT++SLPLSG++    +   W   FY  G +G  WFL W+  + D P+ H  IS+ E+ YI  S  N  S  KS  +PW  IL S P+WAI++  FS+ W +Y LLT LP+Y  E+L F ++ NGFLS+LPYL S++   + G  AD LR  W  ST   RR+  ++     A FL+   + GCD  +L+V +L ++ T       G   + +DIAP Y GI++G+ N+  TI G + P +    T ++ T  +++ VF IAA+I V G  F  +F  GE+Q W  ND +H   +
Sbjct:   39 RYNLAILAFFGFFIVYALRVNLSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSGIIC---YYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQLSSQKS--VPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDY-SLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDN-TVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND-HHGHRH 495

The following BLAST results are available for this feature:

BLAST of TCONS_00060179-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00060179-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S17A5	2.563e-124	43.23	Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2	[more]

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TCONS_00060179-protein (polypeptide) - C. hemisphaerica