TCONS_00060179-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060179-protein
Unique NameTCONS_00060179-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length497

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060179-protein ID=TCONS_00060179-protein|Name=TCONS_00060179-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MTSCYVPRRYIMILFSHFGFFIVYALRVNLSVVLVAMVNSTYANVDNSDP
ECRSTDTNVTAAEYNGGEFNWNQNQQGIILSSFFYGYLLTQVPGGWLSMK
FGGKIVLGLGVLGTCVLTILTPLAARTSIYWLIVVRVLEGFGEGVTFPAM
HSLLAQWAPPEEISRMAVIAYSGMQTGTIVSLPLSGVLADSSFLGGWPSA
FYVLGAVGCVWFLFWMIFIYDGPENHPSISNVERLYITKSHNNSSSDTKS
TKIPWSHILTSRPVWAIMIGLFSHCWVWYMLLTGLPSYFSEVLDFKLKNN
GFLSALPYLSSFVVQQIGGWFADYLRKNWISTTAARRLAGILAFYPSAGF
LLLVSYAGCDQIALSVGYLVLAVTFITLNQIGLICSQVDIAPRYVGIIMG
LANSAGTIAGCITPSVTGYFTNEHPTREQYRKVFMIAASICVIGGTFCNV
FVSGELQPWNDIYHDEENFNGSDEEQVLINSSNSINDDELVDNYVRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037855XLOC_037855Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060179TCONS_00060179Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 6..236
e-value: 2.3E-36
score: 124.5
NoneNo IPR availableGENE3D1.20.1250.20coord: 249..459
e-value: 4.5E-22
score: 77.8
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 19..414
e-value: 3.7E-61
score: 206.9
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 32..456
score: 23.692
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 68..452
e-value: 7.32449E-37
score: 138.216
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 68..452
coord: 7..39

Blast
[Close]
BLAST of TCONS_00060179-protein vs. Swiss-Prot (Human)
Match: S17A5 (Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2)

HSP 1 Score: 372.089 bits (954), Expect = 2.563e-124
Identity = 201/465 (43.23%), Postives = 284/465 (61.08%), Query Frame = 0 
Query:    9 RYIMILFSHFGFFIVYALRVNLSVVLVAMVNSTYANVDNSDPECRSTDTNVTAAEYN--GGEFNWNQNQQGIILSSFFYGYLLTQVPGGWLSMKFGGKIVLGLGVLGTCVLTILTPLAARTSIYWLIVVRVLEGFGEGVTFPAMHSLLAQWAPPEEISRMAVIAYSGMQTGTIVSLPLSGVLADSSFLGGWPSAFYVLGAVGCVWFLFWMIFIYDGPENHPSISNVERLYITKSHNNSSSDTKSTKIPWSHILTSRPVWAIMIGLFSHCWVWYMLLTGLPSYFSEVLDFKLKNNGFLSALPYLSSFVVQQIGGWFADYLRKNW-ISTTAARRLAGILAFYPSAGFLLLVSYAGCDQIALSVGYLVLAVTFITLNQIGLICSQVDIAPRYVGIIMGLANSAGTIAGCITPSVTGYFTNEHPTREQYRKVFMIAASICVIGGTFCNVFVSGELQPW--NDIYHDEEN 468
            RY + + + FGFFIVYALRVNLSV LV MV+S     DN   +     +      +N  G ++ W+   QG IL SFFYGY++TQ+PGG+++ K GGK++LG G+LGT VLT+ TP+AA   +  LIV+R LEG GEGVTFPAMH++ + WAPP E S++  I+Y+G Q GT++SLPLSG++    +   W   FY  G +G  WFL W+  + D P+ H  IS+ E+ YI  S  N  S  KS  +PW  IL S P+WAI++  FS+ W +Y LLT LP+Y  E+L F ++ NGFLS+LPYL S++   + G  AD LR  W  ST   RR+  ++     A FL+   + GCD  +L+V +L ++ T       G   + +DIAP Y GI++G+ N+  TI G + P +    T ++ T  +++ VF IAA+I V G  F  +F  GE+Q W  ND +H   +
Sbjct:   39 RYNLAILAFFGFFIVYALRVNLSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSGIIC---YYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQLSSQKS--VPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDY-SLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDN-TVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND-HHGHRH 495
The following BLAST results are available for this feature:
BLAST of TCONS_00060179-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S17A52.563e-12443.23Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2[more]
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