TCONS_00020087-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020087-protein
Unique NameTCONS_00020087-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020087-protein ID=TCONS_00020087-protein|Name=TCONS_00020087-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MALFGQHIIRGSKQMSFHKKMRGTRLLCTSLQQQAADKQNKGTFMVEPTT
MKIQKFAPESMSATDLPPVVGRYSTQGFHIQGNKLYGPVALLPRSFYSWK
VKDASDITVKSLQLFTVAEPKIEILVIGTGLKIERLSQEVRDYMRRHNIA
LEVLDTPNACSTFNFLLEENRMPGAALIPPTDIPLY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011291XLOC_011291Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020087TCONS_00020087Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007523NDUFAF3/AAMDC
IPR034095NDUF3
Vocabulary: Biological Process
TermDefinition
GO:0032981mitochondrial respiratory chain complex I assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007523NDUFAF3/Mth938 domain-containing proteinGENE3D3.40.1230.10coord: 50..181
e-value: 1.6E-39
score: 133.9
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 72..178
e-value: 3.6E-30
score: 104.2
IPR007523NDUFAF3/Mth938 domain-containing proteinSUPERFAMILY64076MTH938-likecoord: 68..180
IPR034095NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3CDDcd05125Mth938_2P1-likecoord: 73..180
e-value: 2.05944E-50
score: 159.673

Blast
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BLAST of TCONS_00020087-protein vs. Swiss-Prot (Human)
Match: NDUF3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Homo sapiens GN=NDUFAF3 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.500e-38
Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 0 
Query:   70 VGRYSTQGFHIQGNKLYGPVALLPRSFYSWKVKDASDITVKSLQLFTVAEPKIEILVIGTGLKIERLSQEVRDYMRRHNIALEVLDTPNACSTFNFLLEENRMPGAALIPP 180
            +  Y+++GF I GN++ GP ALLP S   W V    DIT  S  LF + EP+IEI+V+GTG + ERL  +V   MR+  IA+EV DTPNAC+TFNFL  E R+ GAALIPP
Sbjct:   60 IDSYNSRGFMINGNRVLGPCALLPHSVVQWNVGSHQDITEDSFSLFWLLEPRIEIVVVGTGDRTERLQSQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAALIPP 170
The following BLAST results are available for this feature:
BLAST of TCONS_00020087-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUF32.500e-3854.05NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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