TCONS_00017446-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00017446-protein
Unique Name	TCONS_00017446-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1422

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00017446-protein ID=TCONS_00017446-protein|Name=TCONS_00017446-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1422bp
EVTKLQEDLETMQPLLAQAAIETEETMEKIQKDTIVANETKEVVQKEEQG
AIKKAQETQAIADDAQRDLNEAIPALEAALASLKSLNRNDVVEVRALQRP
PPGVKMVIESVCIMKGVKPKKVAGEKVGTKVDDYLEPGRTLLQDPGKFLD
MLFQYDKENIPESVITRIQPYIDNEDFQPAAIAKVSKACTSICQWVRAMH
KYHFVAKGVAPKRERLKLAQEELMETQRLLDKAKGKLAEVEEGIASLQAK
YDECISKKEDLEFKTNQCTARLERAEKLIGGLGDEKGRWEESIVTFDSQI
ESIVGDVFISSGVIAYLGVFTGEYRLDLVQEWMKELKGYNIAHSENCTLV
GTLGDPVKIRNWQIYGLPRDGLSVDNGVIVEYSRRWPLFIDPQGQANKWI
KSLEREAGIDVIKLTDRDFLRSLENAIRFGKPCLLENIGEELDPALEPVL
LKLTYKQSGSTVIKLGDAIIPYHEDFKFYITTKLPNPCYTPETSTKVTLV
NFTLSPSGLEDQMLALVVAEERPDLEEAKNQLIISNAKMKQELKEIEDKI
LHKLSASEGSPVDDIDLIKTLEQSKVKSQEIKSKVIVAEQTEKDIDATRS
QYIPVAVRTQILFFCTYDLAMIDPMYQYSLDWFINIFLNGILNAEQADNI
TRRIENINDFFTYSLYTNVCRSLFEKHKLLFSFLLSVRILMNENKINMDE
WRFLLAGGSTVPRDLPNPASDWLSDRAWREVVMLSNLPKFEAFADDFKNN
LEGFKRIFDSVEPHREPQPGQWAECLDNFQKLLVLRCIRADKVTNAMQDF
VAGHLGQRFIEPQTADLGQVFKDSSPTTPLIFVLSPGTDPASALYKFAEE
MRFSKKLNAISLGQGQGPRAEALMYSAMERGKWVFFQNCHLAPSWMPTLE
RLIENIDTDKVHRDFRMWATSMPSPKFPVSILQNSSKMTVEPPKGIKANL
LKMYIGWNDDFLNSCGRTNEFRSLLFSLCLFHGVAIERRKYGPLGFNIPY
EFTEGDSQICISQLSMFLDEYPDIPYKVLKYTAGHINYGGRVTDDWDRRC
IMTILEDFYAPKVLDDGHTFSVSGIYKQIVQGSEHEAYMDYIRHLPINDT
PEIFGLHDNANITFAQNETFSLLNGILKLQPKSSSGSGRSREEIMEETAR
SILSKVPDPISLADVLQKYPVMYEESMNTVLAQEVTRYNKLLTTVQDTLQ
DLLKALKGLVVMSEQLEMMSNSLFNNQVPDMWAGKAYPSLKPLASWVLDL
IERVKFINGWIDNGIPPVFWISGFFFPQGFLTGTLQNYARANAMAIDTIS
FDYEVMKEPAKKLTSRPTSGCYISGLYLEGARWGYSIHELAESKPKELYT
EMPVIWLKPAQNRVKPNDGIYECPVYKTLTRAGTLSTTGHSTNFVLSVEL
PTSKNQPYWIKQGVALMCALDF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009764	XLOC_009764	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00017446	TCONS_00017446	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024743	Dynein_HC_stalk
IPR004273	Dynein_heavy_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0030286	dynein complex

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

Vocabulary: **Molecular Function**
Term	Definition
GO:0003777	microtubule motor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 216..264
None	No IPR available	COILS	Coil	Coil	coord: 525..549
None	No IPR available	GENE3D	1.20.5.340		coord: 197..307 e-value: 7.1E-7 score: 28.6
None	No IPR available	GENE3D	3.40.50.300		coord: 816..941 e-value: 5.5E-28 score: 96.8
None	No IPR available	PFAM	PF12781	AAA_9	coord: 360..581 e-value: 8.5E-89 score: 296.3
IPR024743	Dynein heavy chain, coiled coil stalk	PFAM	PF12777	MT	coord: 34..331 e-value: 1.3E-47 score: 162.4
IPR004273	Dynein heavy chain domain	PFAM	PF03028	Dynein_heavy	coord: 719..1418 e-value: 1.5E-282 score: 939.0

Blast

[Close]

BLAST of TCONS_00017446-protein vs. Swiss-Prot (Human)
Match: DYH1 (Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4)

HSP 1 Score: 1729.92 bits (4479), Expect = 0.000e+0
Identity = 803/1146 (70.07%), Postives = 961/1146 (83.86%), Query Frame = 0

Query:  277 KLIGGLGDEKGRWEESIVTFDSQIESIVGDVFISSGVIAYLGVFTGEYRLDLVQEWMKELKGYNIAHSENCTLVGTLGDPVKIRNWQIYGLPRDGLSVDNGVIVEYSRRWPLFIDPQGQANKWIKSLEREAGIDVIKLTDRDFLRSLENAIRFGKPCLLENIGEELDPALEPVLLKLTYKQSGSTVIKLGDAIIPYHEDFKFYITTKLPNPCYTPETSTKVTLVNFTLSPSGLEDQMLALVVAEERPDLEEAKNQLIISNAKMKQELKEIEDKILHKLSASEGSPVDDIDLIKTLEQSKVKSQEIKSKVIVAEQTEKDIDATRSQYIPVAVRTQILFFCTYDLAMIDPMYQYSLDWFINIFLNGILNAEQADNITRRIENINDFFTYSLYTNVCRSLFEKHKLLFSFLLSVRILMNENKINMDEWRFLLAGGSTVPRDLPNPASDWLSDRAWREVVMLSNLPKFEAFADDFKNNLEGFKRIFDSVEPHREPQPGQWAECLDNFQKLLVLRCIRADKVTNAMQDFVAGHLGQRFIEPQTADLGQVFKDSSPTTPLIFVLSPGTDPASALYKFAEEMRFSKKLNAISLGQGQGPRAEALMYSAMERGKWVFFQNCHLAPSWMPTLERLIENIDTDKVHRDFRMWATSMPSPKFPVSILQNSSKMTVEPPKGIKANLLKMYIGWNDDFLNSCGRTNEFRSLLFSLCLFHGVAIERRKYGPLGFNIPYEFTEGDSQICISQLSMFLDEYPDIPYKVLKYTAGHINYGGRVTDDWDRRCIMTILEDFYAPKVLDDGHTFSVSGIYKQIVQGSEHEAYMDYIRHLPINDTPEIFGLHDNANITFAQNETFSLLNGILKLQPKSSSGSGRSREEIMEETARSILSKVPDPISLADVLQKYPVMYEESMNTVLAQEVTRYNKLLTTVQDTLQDLLKALKGLVVMSEQLEMMSNSLFNNQVPDMWAGKAYPSLKPLASWVLDLIERVKFINGWIDNGIPPVFWISGFFFPQGFLTGTLQNYARANAMAIDTISFDYEVMKEPAKKLTSRPTSGCYISGLYLEGARWGYSIHELAESKPKELYTEMPVIWLKPAQNRVKPNDGIYECPVYKTLTRAGTLSTTGHSTNFVLSVELPTSKNQPYWIKQGVALMCALDF 1422
            +LI GL DEK RW+E++      + +I GDV +++G +AYLG FTG+YR  L   W+K+L+ +N+ H+   TL+GTLG+PVKIR+WQI GLP D LSV+NGVI ++S+RW  FIDPQ QANKWIK++E++ G+DV KL+DRDFLRS+ENAIRFGKPCLLEN+GEELDPALEPVLLK TYKQ G+TV+KLGD +IPYHEDF+ YITTKLPNP YTPE STK+TL+NFTLSPSGLEDQ+L  VVAEERPDLEEAKNQLIISNAKM+QELK+IED+IL++LS+SEG+PVDD++LIK LE SK+K+ EI++KV +AEQTEKDID TR +YIPVA+RTQILFFC  DLA +DPMYQYSL+WF+NIFL+GI N+E+ADN+ +RI NIN + TYSLY+NVCRSLFEKHKL+F+FLL VRI+MNE KIN  EWR+LL+GGS +     NPA DWLSDRAWR+++ LSNLP F +F+ DF  +L  F+ IFDS+EPHREP PG W + LD FQKLLVLRC+R DKVTNAMQDFVA +L  RFIEPQTA+L  VFKDS+ TTPLIFVLSPGTDPA+ LYKFAEEM+FSKKL+AISLGQGQGPRAEA+M S++ERGKWVFFQNCHLAPSWMP LERLIE+I+ DKVHRDFR+W TS+PS KFPVSILQN SKMT+EPP+G++ANLLK Y    +DFLNSC +  EF+SLL SLCLFHG A+ER K+GPLGFNIPYEFT+GD +ICISQL MFLDEY DIPYKVLKYTAG INYGGRVTDDWDRRCIM ILEDFY P VL   H++S SGIY QI    +   Y+ YI+ LP+ND PEIFGLHDNANITFAQNETF+LL  I++LQPKSSS   + REEI+E+  ++IL KVP+PI+L  V+ KYPV+YEESMNTVL QEV RYN+LL  +  TLQDLLKALKGLVVMS QLE+M+ SL+NN VP++W+ KAYPSLKPL+SWV+DL++R+ F+  WI +GIP VFWISGFFFPQ FLTGTLQN+AR   ++IDTISFD++VM E   +LT RP  GCYI GL+LEGARW     +LAES+PKELYTEM VIWL P  NR   +   Y CP+YKTLTRAGTLSTTGHSTN+V++VE+PT + Q +WIK+GVAL+CALD+
Sbjct: 3186 QLINGLSDEKVRWQETVENLQYMLNNISGDVLVAAGFVAYLGPFTGQYRTVLYDSWVKQLRSHNVPHTSEPTLIGTLGNPVKIRSWQIAGLPNDTLSVENGVINQFSQRWTHFIDPQSQANKWIKNMEKDNGLDVFKLSDRDFLRSMENAIRFGKPCLLENVGEELDPALEPVLLKQTYKQQGNTVLKLGDTVIPYHEDFRMYITTKLPNPHYTPEISTKLTLINFTLSPSGLEDQLLGQVVAEERPDLEEAKNQLIISNAKMRQELKDIEDQILYRLSSSEGNPVDDMELIKVLEASKMKAAEIQAKVRIAEQTEKDIDLTRMEYIPVAIRTQILFFCVSDLANVDPMYQYSLEWFLNIFLSGIANSERADNLKKRISNINRYLTYSLYSNVCRSLFEKHKLMFAFLLCVRIMMNEGKINQSEWRYLLSGGS-ISIMTENPAPDWLSDRAWRDILALSNLPTFSSFSSDFVKHLSEFRVIFDSLEPHREPLPGIWDQYLDQFQKLLVLRCLRGDKVTNAMQDFVATNLEPRFIEPQTANLSVVFKDSNSTTPLIFVLSPGTDPAADLYKFAEEMKFSKKLSAISLGQGQGPRAEAMMRSSIERGKWVFFQNCHLAPSWMPALERLIEHINPDKVHRDFRLWLTSLPSNKFPVSILQNGSKMTIEPPRGVRANLLKSYSSLGEDFLNSCHKVMEFKSLLLSLCLFHGNALERHKFGPLGFNIPYEFTDGDLRICISQLKMFLDEYDDIPYKVLKYTAGEINYGGRVTDDWDRRCIMNILEDFYNPDVLSPEHSYSASGIYHQIPPTYDLHGYLSYIKSLPLNDMPEIFGLHDNANITFAQNETFALLGTIIQLQPKSSSAGSQGREEIVEDVTQNILLKVPEPINLQWVMAKYPVLYEESMNTVLVQEVIRYNRLLQVITQTLQDLLKALKGLVVMSSQLELMAASLYNNTVPELWSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVFWISGFFFPQAFLTGTLQNFARKFVISIDTISFDFKVMFEAPSELTQRPQVGCYIHGLFLEGARWDPEAFQLAESQPKELYTEMAVIWLLPTPNRKAQDQDFYLCPIYKTLTRAGTLSTTGHSTNYVIAVEIPTHQPQRHWIKRGVALICALDY 4330

HSP 2 Score: 369.007 bits (946), Expect = 2.093e-104
Identity = 191/278 (68.71%), Postives = 233/278 (83.81%), Query Frame = 0

Query:    1 EVTKLQEDLETMQPLLAQAAIETEETMEKIQKDTIVANETKEVVQKEEQGAIKKAQETQAIADDAQRDLNEAIPALEAALASLKSLNRNDVVEVRALQRPPPGVKMVIESVCIMKGVKPKKVAGEKVGTKVDDYLEPGRTLLQDPGKFLDMLFQYDKENIPESVITRIQPYIDNEDFQPAAIAKVSKACTSICQWVRAMHKYHFVAKGVAPKRERLKLAQEELMETQRLLDKAKGKLAEVEEGIASLQAKYDECISKKEDLEFKTNQCTARLERAEKL 278
            +V K+QEDLE+M PLL +AA +T  TME+I+ DT +A ET+  VQ EE  A +KA++ QAIADDAQ+DL+EA+PAL+AALASL++LN+NDV EVRA+QRPPPGVK+VIE+VCIMKG+KPKKV GEK GTKVDDY EPG+ LLQDPG FL+ LF++DK+NI + VI  IQPYIDNE+FQPA IAKVSKACTSICQWVRAMHKYHFVAK V PKR+ L  AQ++L  TQR+LD+AK +L EVE+GIA++QAKY ECI+KKE+LE K  QC  RL RA K+
Sbjct: 2845 DVAKMQEDLESMHPLLEEAAKDTMLTMEQIKVDTAIAEETRNSVQTEEIKANEKAKKAQAIADDAQKDLDEALPALDAALASLRNLNKNDVTEVRAMQRPPPGVKLVIEAVCIMKGIKPKKVPGEKPGTKVDDYWEPGKGLLQDPGHFLESLFKFDKDNIGDVVIKAIQPYIDNEEFQPATIAKVSKACTSICQWVRAMHKYHFVAKAVEPKRQALLEAQDDLGVTQRILDEAKQRLREVEDGIATMQAKYRECITKKEELELKCEQCEQRLGRAGKV 3122

The following BLAST results are available for this feature:

BLAST of TCONS_00017446-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00017446-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYH1	2.093e-104	70.07	Dynein heavy chain 1, axonemal OS=Homo sapiens GN=...	[more]

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TCONS_00017446-protein (polypeptide) - C. hemisphaerica