TCONS_00011358-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011358-protein
Unique NameTCONS_00011358-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011358-protein ID=TCONS_00011358-protein|Name=TCONS_00011358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MLAAPARCIPSVTLRSFILHSIIFAWCSFGIYKDQTVYIIPKFKEYGGRA
QFLTMITAYVCLVAYGIAFVVDLIQMVTGLLEDKKITTNGYEEHRSILIS
LRDDLVSFWAFTLSVFVVLMYWSLCYIDLDGVHPLESRKITPLFGWYNQY
LHTVPIFNAFLLITNVNYGYGGIKKVIFNIILLGSGYFFWISHLAQVKGY
WVYGFMDKLNKVQFGAFVVACHLIFFLVYAIGRKVSTSCWSQEYKERVII
ENERKGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006367XLOC_006367Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011358TCONS_00011358Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006838Far-17a_AIG1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006838FAR-17a/AIG1-like proteinPFAMPF04750Far-17a_AIG1coord: 16..235
e-value: 1.5E-32
score: 112.5

Blast
[Close]
BLAST of TCONS_00011358-protein vs. Swiss-Prot (Human)
Match: AIG1 (Androgen-induced gene 1 protein OS=Homo sapiens GN=AIG1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.185e-17
Identity = 60/240 (25.00%), Postives = 105/240 (43.75%), Query Frame = 0 
Query:    9 IPSVTLRSFILHSIIFAWCSFGIYKDQTVYIIPKFKEYGGRAQFLTMITAYVCLVAYGIAFVVDLIQMVTGLLEDKKITTNGYEEHRSI--LISLRDDLVSFWAFTLSVFVVLMYWSLCYIDLDGVHPLESRKITPLFGWYNQYLHTVPIFNAFLLITNVNYGYGGIKKVIFNIILLGSGYFFWISHLAQVKGYWVYGFMDKLNKVQFGAFVVACHLIFFLVYAIGRKVSTSCWSQEYKE 246
            +P   LR  IL S     C++   +      +P  + YGG  +FLT I   +  V +GI  + DL  ++T         +   E+ R +  LISLRD +++  AF + VFVV ++W +   D + ++P       P  GW N  +HT  +    + +   ++ Y      +  I     GY  W+  +  V G WVY F++ +       F  +  ++   +Y +G  ++   W  + K 
Sbjct:    4 VPCQVLRMAILLSYCSILCNYKAIE------MPSHQTYGGSWKFLTFIDLVIQAVFFGICVLTDLSSLLTR-------GSGNQEQERQLKKLISLRDWMLAVLAFPVGVFVVAVFWIIYAYDREMIYPKLLDNFIP--GWLNHGMHTTVLPFILIEMRTSHHQYPSRSSGLTAICTFSVGYILWVCWVHHVTGMWVYPFLEHIGPGARIIFFGSTTILMNFLYLLGEVLNNYIWDTQKKP 228
The following BLAST results are available for this feature:
BLAST of TCONS_00011358-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIG13.185e-1725.00Androgen-induced gene 1 protein OS=Homo sapiens GN... [more]
back to top