TCONS_00009569-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009569-protein
Unique NameTCONS_00009569-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length586

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009569-protein ID=TCONS_00009569-protein|Name=TCONS_00009569-protein|organism=Clytia hemisphaerica|type=polypeptide|length=586bp
MQSCILFAFLVGVVCGAPPKFPIGSEPGLWEGDIKLNEKQKKDVDRILEK
KGTSTFGLTNVYPPWTNGVVVYEFAPSIANNPAKNRGIYAAMREWTTKTS
NCITFRKRRPNEKNYLQFFVGNGCWGHLGMPNGRSQISVGAGCEGQNVMA
HEIGHALGFWHEQSRTDRDSYLRILWENVPNAFREAFEKYGRDQIDSLGV
PYDYTSIMHYPWNAFSTTGRDTVRPLRKVPSPGPYVHVSALDVKQARLFY
KCDAKPPVTRQPPVTRQPPVTKCITETREVSVNARDPSCFDRSTSCASWA
SRGECRRNPGYMRPNCKKSCNLCGSSSCVDNSGNCAYWARSGQCQANPGY
MNVNCRKSCKLCTKVVTSKRCYTLPPQTTTSEPLTPPIPSTTQGPPPIPT
TGPVVPPIPTTNGPVPPTTVDPGTPEPPPTPDDCKAKENYGLTGQMLSAS
SSDSKWSEAKFGVFDTKSDDQSVGAWCAAYNTDDQYLQIEITAGTLVAGL
KIQGRATSETDPKFHKFITQFEIKWKKDDNSDWLIVDHLFKTNISDANKG
EEIEFEVPIKARYLRIYPKSWQHQMCMRVDLIKCKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005350XLOC_005350Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009569TCONS_00009569Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR003582ShKT_dom
IPR006026Peptidase_Metallo
IPR000421FA58C
IPR008979Galactose-bd-like
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 238..251
score: 32.38
coord: 201..216
score: 59.27
coord: 143..161
score: 47.63
coord: 162..179
score: 48.8
IPR001506Peptidase M12APFAMPF01400Astacincoord: 65..253
e-value: 7.9E-53
score: 178.8
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 327..363
e-value: 6.4E-11
score: 52.3
coord: 288..324
e-value: 9.4E-12
score: 55.1
IPR003582ShKT domainPFAMPF01549ShKcoord: 288..323
e-value: 6.8E-9
score: 36.0
coord: 327..362
e-value: 6.9E-9
score: 36.0
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 328..362
score: 11.167
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 289..323
score: 12.278
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 61..206
e-value: 8.5E-44
score: 161.5
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 448..579
e-value: 2.6E-16
score: 59.8
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 434..584
score: 24.723
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 432..586
e-value: 1.5E-22
score: 79.7
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 439..585
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 57..254
e-value: 4.7E-51
score: 173.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..431
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 61..253
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 67..250
e-value: 1.11315E-64
score: 210.505

Blast
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BLAST of TCONS_00009569-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.509e-29
Identity = 80/229 (34.93%), Postives = 110/229 (48.03%), Query Frame = 0 
Query:   29 LWEGDIKLNEKQKKDVDRILEKKGTSTFGLTNVYPPWTNGVVVYEFAPSIANNPAKNRGIYAAMREWTTKTSNCITFRKRRPNEKNYLQFFVGNGCWGHLGMPN-GRSQISVGAGCEGQNVMAHEIGHALGFWHEQSRTDRDSYLRILWENVPNAFREAFEKYGRDQIDSLGVPYDYTSIMHYPWNAFSTTGRDTV--RPLRKVPSPGPYVHVSALDVKQARLFYKCDA 254
            L+EGDI+L+  Q ++          S  G    +P      + Y    S+  N      I  A   +  KT  CI F K    E NY+  F G+GCW  +G    G+ ++S+GA C+    + HE  HALGFWHEQSR+DRD Y+RI+W+ + +     F  Y  D  DSL VPYDYTS+MHY   AF      T+  R        G  +  S  D+ +    Y C +
Sbjct:   48 LFEGDIRLDRAQIRN----------SIIGEKYRWPH----TIPYVLEDSLEMNAKG--VILNAFERYRLKT--CIDF-KPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSS 257
The following BLAST results are available for this feature:
BLAST of TCONS_00009569-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.509e-2934.93Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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