TCONS_00005151-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005151-protein
Unique NameTCONS_00005151-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length372

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005151-protein ID=TCONS_00005151-protein|Name=TCONS_00005151-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
LNVSLSIMETKYIEIYQSPICMACTCYGPDRFICYFRTAWANGDTCRGRE
ECTQMIKKEKIREACSNPESLPCPSGIHEQTKPWQQGDCHVTCSARDYQI
HPIITNKTDPKWCHYLQGYTKCGECGDREQFMQENGELVFPCKRSPFITW
KHYVCDGREHCVDGSDEHDCPEYLCPYEVIGGQSWLPSKPNTTNRLPCQL
LHSSFKGETIRFCNNESRWQKVDYCGCTRAQISQLPRDMTLEKANVTFIG
QITEEILLEVEMSPRKEIFLREMIHILNFLMNTTQQVVEKHFETFDEQIF
YNVAQVLFGRSPCTNDVVDMLESKLKDLLVKISDKFGAYRWHRVQIFPRT
FWESFIASSSENSHQFTNNEVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002936XLOC_002936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005151TCONS_00005151Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002172LDrepeatLR_classA_rpt
IPR001879GPCR_2_extracellular_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1220.10coord: 141..177
e-value: 6.0E-8
score: 32.0
NoneNo IPR availableCDDcd00112LDLacoord: 140..170
e-value: 0.00491919
score: 33.3342
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 124..171
score: 8.9
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 139..171
IPR001879GPCR, family 2, extracellular hormone receptor domainPROSITEPS50227G_PROTEIN_RECEP_F2_3coord: 160..231
score: 8.621

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005151-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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