TCONS_00005151 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005151
Unique NameTCONS_00005151
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1117

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005151 ID=TCONS_00005151|Name=TCONS_00005151|organism=Clytia hemisphaerica|type=transcript|length=1117bp
CTCAATGTTTCATTATCGATCATGGAAACAAAGTACATCGAGATTTATCA
ATCACCCATCTGTATGGCATGTACGTGTTACGGCCCTGATCGGTTCATCT
GTTACTTCCGAACCGCCTGGGCGAATGGTGACACATGCCGTGGTAGAGAA
GAATGTACTCAAATGATTAAGAAGGAAAAAATAAGAGAAGCCTGTTCCAA
TCCTGAATCTCTCCCTTGTCCATCCGGTATTCATGAACAAACGAAACCAT
GGCAACAAGGAGATTGTCACGTGACCTGTTCAGCACGTGATTACCAGATT
CATCCAATCATCACCAATAAAACTGATCCAAAATGGTGTCACTATCTCCA
AGGTTACACAAAATGTGGAGAATGTGGCGATAGAGAGCAGTTCATGCAAG
AGAATGGAGAGCTGGTGTTTCCGTGTAAAAGATCACCATTCATCACTTGG
AAGCATTATGTTTGTGATGGGAGAGAGCATTGTGTGGATGGGAGTGATGA
ACATGATTGTCCTGAATatttgTGTCCATACGAAGTGATTGGTGGACAAT
CTTGGTTACCAAGCAAACCAAACACAACAAACCGGTTGCCATGCCAACTA
CTTCACTCTTCATTCaaagGGGAAACAATCAGATTTTGCAATAACGAAAG
TCGATGGCAAAAGGTTGATTACTGCGGATGCACAAGAGCTCAAATTTCTC
AACTACCACGGGATATGACATTGGAGAAAGCGAATGTCACCTTCATTGGA
CAGATCACAGAGGAAATACTCCTGGAAGTTGAAATGTCACCTCGCAAAGA
AATATTCCTTCGTGAAATGATCCACATTCTCAATTTTCTGATGAACACAA
CACAACAAGTGGTCGAAAAGCATTTTGAAACTTTCGATGAACAAATTTTC
TACAATGTAGCGCAAGTGTTATTCGGAAGATCGCCTTGCACCAATGACGT
TGTTGACATGTTAGAAAGTAAACTCAAAGATCTCTTGGTGAAGATATCCG
ACAAATTTGGTGCTTATCGATGGCACAGAGTGCAGATATTTCCACGAACT
TTTTGGGAATCCTTTATTGCGAGTTCTTCAGAAAATTCACATCAATTCAC
AAACAACGAAGTTCTGA
Run BLAST on NCBI

protein sequence of TCONS_00005151-protein

>TCONS_00005151-protein ID=TCONS_00005151-protein|Name=TCONS_00005151-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
LNVSLSIMETKYIEIYQSPICMACTCYGPDRFICYFRTAWANGDTCRGRE
ECTQMIKKEKIREACSNPESLPCPSGIHEQTKPWQQGDCHVTCSARDYQI
HPIITNKTDPKWCHYLQGYTKCGECGDREQFMQENGELVFPCKRSPFITW
KHYVCDGREHCVDGSDEHDCPEYLCPYEVIGGQSWLPSKPNTTNRLPCQL
LHSSFKGETIRFCNNESRWQKVDYCGCTRAQISQLPRDMTLEKANVTFIG
QITEEILLEVEMSPRKEIFLREMIHILNFLMNTTQQVVEKHFETFDEQIF
YNVAQVLFGRSPCTNDVVDMLESKLKDLLVKISDKFGAYRWHRVQIFPRT
FWESFIASSSENSHQFTNNEVL
Run BLAST on NCBI

transcript from alignment at sc0000051:654107..659848+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005151 ID=TCONS_00005151|Name=TCONS_00005151|organism=Clytia hemisphaerica|type=transcript|length=5742bp|location=Sequence derived from alignment at sc0000051:654107..659848+ (Clytia hemisphaerica)
CTCAATGTTTCATTATCGATCATGGAAACAAAGTACATCGAGATTTATCA
ATCACCCATCTGTATGGCATGTACGTGTTACGGCCCTGATCGGTTCATCT
GTTACTTCCGAACCGCCTGGGCGAATGGTGACACATGCCGTGGTAGAGAA
GAATGTACTCAAATGATTAAGAAGGAAAAAATAAGAGAAGGTTAGTTGTT
AAAGAAAGGGCGAAAATCTGACTCCATTTCTCGAAGAATTTTGGACAGTT
GATGAGAAAGGATAAAAGAATTGAGCATGAAAAGAactaaaacaagtgat
acttatgatagacctacctggttatgcatttaacacattataattgatat
atatgtgagcgtgaccattaaacaatcattcagaacacaaatagtgacga
tctattaaaattagtcgtttgtttcttataaaaaaaacgtttagaaacca
aaatttcatgctcttaaaatattctttcatattcaagactttgtgagcaa
aaaaacacatctatctcatcaaaaaattgagtaatttggctaagaacatt
gatgtatgcttattaatagtgattcttatacataaacatgcattttttaa
gccaacaaatttttttcgaaaaattctgcttgagccatctttaacctatg
atggtaccctactttcatgcaaaaaaatcagaaaaagttaatgatccaat
ttttcacaaagtccaaaaaacccgttttttagccgtttagcccaaatttg
ctaaaagaaaattttttcgaaagtcgggctccgtcacattcgagggttta
tagttatgcatctttgtgcaaaaaatcataaagaataaaagaNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATGTTGCCAG
Tttctctataaaaacacgccaagtaaccaaaatttcatgtctaaacacac
atattcttcaaaagtaagccctcatgagcaaaaataacatctatctcata
aaaaagttgagtaatttgactaagtacattgatgtatgcttattaatagt
gattcttatagataaagatgcgttttttgagccaacaaattttttttgca
aaaatctgcttgagccatcttttacctctgatggtaccctactttcatgc
aaaaaatcagaaaaaattaatgatccaatttttcacaaagtccaaaaaac
cctttttttagccgtttagcccaaatttgctaaaaggattttttttcgaa
agtcgggctccgtcacattcgagggtttatagttatgcatctttgtgcaa
aaaatcagaaaaaactaatgagccaatctcgagaaaagctggtaacgaac
gaacggacagaggtgaatttataggacctccaccggggtaggtccaaaac
gCTCGCAAAATGCCTAAGCCGCAATCAGACCGAATAAACAAGTTACCAAG
GAGCAAAATGCAATTCTTTAAAATCACTAATTCTTCGTTACTTGACGCCG
TccaacttttttcaacttcaaaaCAATCGATTTCAATTTATTCCTTTTTA
TAGCCTGTTCCAATCCTGAATCTCTCCCTTGTCCATCCGGTATTCATGAA
CAAACGAAACCATGGCAACAAGGAGATTGTCACGTGACCTGTTCAGCACG
TGATTACCAGATTCATCCAATCATCACCAATAAAACTGATCCAAAATGGT
GTCACTATCTCCAAGGTTACACAAAATGTGGAGAATGTGGCGATAGAGAG
CAGTTCATGCAAGAGAATGGAGAGCTGGTGTTTCCGTGTAAAAGATCACC
ATTCATCACTTGGAAGCATTATGTTTGTGATGGGAGAGAGCATTGTGTGG
ATGGGAGTGATGAACATGATTGTCCTGAATGTGAGTATATGGACGTCCTT
TCCCTCAAGAGCTCTAGAGtaacagggtgtctacggattttttttcggga
ttttcaaggttttcaaggttttttcggtcatttttaagtggtttttcaag
gttttttggcaaaaactttggcatttttcaaggttttttgatactcagTT
GGCATAGCTCTCTACgggaatttttgtttttttcagagTGGTAGGTGAAC
TAAAAATAGAGAATAGCAAATAAGATTTATTCACTATTGGTGCCAGGGGA
ATTACTTCCACAGTTAAATTATTATCTCCCTCTCGAGAACAATACCAGAA
AAAGAAATACTCCAGCTCCCTAGTCTTCCAACTGTAGAAATAATTAACGA
ATTAGAAGCAAAATTGTTTACAGTgaccgaggaggcgcaaccatggtttg
tgccgacgagagaaaattttgattttgactctttcaaatggctaaaaaac
gccttgtttttgatttttttttttacaaaaatcaattgccaaaagagttg
ttttaaggaatccTATTAAATATTATTGATGAACGGCCATTATtccggga
caagctggagtttttacaagctctttcttgatttggttggtcgttagcct
gtaataaaacaattttgttactttttctaaagaacgcgtcatctctttta
ctttaaatgaccaattagtgaagtatcttataaaaactccagaacaTCTC
ATTATTCTAAGACGCcctgaagcgatttgaaaattgaggaacagtcgatt
tcttagggctcatgcaaacggaaaattagtgacaaaaactCAGCTAATGT
TAAAAGAATATGTTGCATTCGTTGCGACAGAATCGCAACAGAAACAGGGG
GATATAGAATTCTCTAAATGTTATAATGGTTTGGCGCCGCAGGcggtttt
ttagaaatttactcATGACAAACAGTTTAGGAACGACTTCTTATTGAGCC
CGCGAAACAGGAACAGAAACAGGTGAAGATGGAATTCTCTAAGGGTTATA
Aaggtttagcgccgcaggcggttttttactttttcttacttttcgaatga
ctggatagtgcttttcaaggtttttaacgatttttcaaggttttcaaggt
ttttcccagaaaagtgatagttttcaaggttttcaaggttgggtggttca
ttttcaaggttttcaaggttttcaaggttttcaaggtcccgtagacaccc
tgtcaGTAAAGTCTGTGTGACAGGTGCAGGCATATTAGGTTGTGAATCAA
CATTTTCCACATCTCGAGACACAGACATCCTCAGTATTGCACTTTTCTAC
CTTTTGATACTGTTAAAAGTACATCAAAGAAAGACTTTATTATGTAATGG
TATGCAATGAGTGAAACATCGCCAATACATTTTGTGTAATGGTATGAAAA
GAGTGAAACATTGGCAATACATTTTGTGTAATGGTATGAAAAGAGTGAAA
CATTGGCAATACATTTTGTGAGCTTCATTTCTACTAACCAAACTACAAAC
ATGNAAACATCGCCAATACATTTTGTGAGCTTCATTTCTACTAGCCAAGc
tataaatatgttttttttatagatttgTGTCCATACGAAGTGATTGGTGG
ACAATCTTGGTTACCAAGCAAACCAAACACAACAAACCGGTTGCCATGCC
AACTACTTCACTCTTCATTCaaaggtttttctttatttgCACAGGAATAC
CAAGCAAGAACAAGAATAAGCCGTGTACCTTTGGTGTGTGGAAAGAGAGA
GAGACATAGCGAAAGAGAGAGAGTTTTCCCCATAATTTATGCAAGTATGA
ATAAATCTGCCTATTACCTTTATTCCAGGGGAAACAATCAGATTTTGCAA
TAACGAAAGTCGATGGCAAAAGGTTGATTACTGCGGATGCACAAGAGCTC
AAATTTCTCAACTACCACGGGTAAAGAtagtgttttgattttaaattgat
AGGAGATAAAATTAGATCAAGATTCATGAAGGCCCAAGCGTTGTTTTCCG
GATATGACCTAGTTGAATCATTATGCAGTAATGTAATAAATGCAAACGGG
TATACACATTCAGGGATGCACTGGGGAGAGGTTGGGGCTAGCTTAgggaa
aaaacaattttgaagcaCTTTTCTAAAACTCAGTCCTTTCAGCTTCAAGC
CAATCCACCGGTTTTCGAAGTCATAACCGGATCATCTTCTTTCTAGTCCT
TTTTGTTACCGACAGGATATGACATTGGAGAAAGCGAATGTCACCTTCAT
TGGACAGATCACAGAGGAAATACTCCTGGAAGTTGAAATGTCACCTCGCA
AAGAAATATTCCTTCGTGAAATGATCCACATTCTCAATTTTCTGATGAAC
ACAACACAACAAGTGGTCGAAAAGCATTTTGAAACTTTCGATGAACAAAT
TTTCTACGTGAGTCCATATCTTGAGGTGATGAAGAAGCACTAGATAATAG
ACCACTAGATAAGAGACAGAATTTTGTATTGTAAGCTGTAAATGTCACAG
AAAGGGCTGTGGTTAAGTTAGAAGGGTGACTGAGCCGACGGTGTTTGGGT
GTTTTGATATagatttgtttttatctttacaaaatttcaaaaaatttctt
aaattcaAATGTTTGCGTCTTTTAGGATTTTgggttgttgaaatacatgg
gccatttgattgttgtcataaaagttttagtgttttctgaaatttgatta
gCTTCTTCCGATGCAATGAAgttcaaatttttcatcaatCATAGAATGTA
GCGCAAGTGTTATTCGGAAGATCGCCTTGCACCAATGACGTTGTTGTAAG
TTATTGAACTCGACAAAATTTACATAAATTTGGACCATGGTTCCGTATGG
TTCCGGTAGGACGGATTTGATGATCATCATCTAGTTTTTTTGTGATTATT
AAACGAGGAAATCGATCACAACAAGATAAAGCCATCacagttttgaatgt
tttggttgaacaaccaggtcagaCCGTCACATTCGCCATAcgcgcagaat
ggatgatctgttatgacattaaaaattttcagactaACTTATTATGAACA
TCCATAATGCAAATAGTATTGCTTCAATATAAGTCAAATTTGAGATTCGT
TTTCAGGACATGTTAGAAAGTAAACTCAAAGATCTCTTGGTGAAGATATC
CGACAAATTTGGTGCTTATCGGTAAGATAAAACAGTTTTGTAAATTCTTT
TGCAGTGTGACACAGGACGTCAAAATAATGCCCACCTAACGCCCACATAA
GGTGTACAAAAAACATCATCTGAACGTCGAAGCATTCAATGCGAATGTTA
GCGAGCAcgtcactaaaaaccgggatttttcatcccgtttcttagtccac
tttgacgattttcgaaaaatagaagcctttcaagtgctttgacgcaaact
tgattttttcgctactgcaggagcttcgaaagttaaaagtgacgtaaaaa
aaCCGAGTGTTTGGAGCCCTAAAAcctgggctccaaacattcgaaaaagt
tgcaaagtggaatagacgttatttgcgtagaaaaaacgcggttGATGTCT
AGTATAGTCAGTTTCTGGTAACTTTCTGATTCTTTCCATTTCAGATGGCA
CAGAGTGCAGATATTTCCACGAACTTTTTGGGAATCCTTTATTGCGAGTT
CTTCAGAAAATTCACATCAATTCACAAACAACGAAGTTCTGA

Coding sequence (CDS) from alignment at sc0000051:654107..659848+

>TCONS_00005151 ID=TCONS_00005151|Name=TCONS_00005151|organism=Clytia hemisphaerica|type=CDS|length=8928bp|location=Sequence derived from alignment at sc0000051:654107..659848+ (Clytia hemisphaerica)
CTCAATGTTTCATTATCGATCATGGAAACAAAGTACATCGAGATTTATCA
ATCACCCATCTGTATGGCATGTACGTGTTACGGCCCTGATCGGTTCATCT
GTTACTTCCGAACCGCCTGGGCGAATGGTGACACATGCCGTGGTAGAGAA
GAATGTACTCAAATGATTAAGAAGGAAAAAATAAGAGAAGCCTGTTCCAA
TCCTGAATCTCTCCCTTGTCCATCCGGTATTCATGAACAAACGAAACCAT
GGCAACAAGGAGATTGTCACGTGACCTGTTCAGCACGTGATTACCAGATT
CATCCAATCATCACCAATAAAACTGATCCAAAATGGTGTCACTATCTCCA
AGGTTACACAAAATGTGGAGAATGTGGCGATAGAGAGCAGTTCATGCAAG
AGAATGGAGAGCTGGTGTTTCCGTGTAAAAGATCACCATTCATCACTTGG
AAGCATTATGTTTGTGATGGGAGAGAGCATTGTGTGGATGGGAGTGATGA
ACATGATTGTCCTGAATatttgTGTCCATACGAAGTGATTGGTGGACAAT
CTTGGTTACCAAGCAAACCAAACACAACAAACCGGTTGCCATGCCAACTA
CTTCACTCTTCATTCaaagGGGAAACAATCAGATTTTGCAATAACGAAAG
TCGATGGCAAAAGGTTGATTACTGCGGATGCACAAGAGCTCAAATTTCTC
AACTACCACGGGATATGACATTGGAGAAAGCGAATGTCACCTTCATTGGA
CAGATCACAGAGGAAATACTCCTGGAAGTTGAAATGTCACCTCGCAAAGA
AATATTCCTTCGTGAAATGATCCACATTCTCAATTTTCTGATGAACACAA
CACAACAAGTGGTCGAAAAGCATTTTGAAACTTTCGATGAACAAATTTTC
TACAATGTAGCGCAAGTGTTATTCGGAAGATCGCCTTGCACCAATGACGT
TGTTGACATGTTAGAAAGTAAACTCAAAGATCTCTTGGTGAAGATATCCG
ACAAATTTGGTGCTTATCGATGGCACAGAGTGCAGATATTTCCACGAACT
TTTTGGGAATCCTTTATTGCGAGTTCTTCAGAAAATTCACATCAATTCAC
AAACAACGAAGTTCTGCTCAATGTTTCATTATCGATCATGGAAACAAAGT
ACATCGAGATTTATCAATCACCCATCTGTATGGCATGTACGTGTTACGGC
CCTGATCGGTTCATCTGTTACTTCCGAACCGCCTGGGCGAATGGTGACAC
ATGCCGTGGTAGAGAAGAATGTACTCAAATGATTAAGAAGGAAAAAATAA
GAGAAGCCTGTTCCAATCCTGAATCTCTCCCTTGTCCATCCGGTATTCAT
GAACAAACGAAACCATGGCAACAAGGAGATTGTCACGTGACCTGTTCAGC
ACGTGATTACCAGATTCATCCAATCATCACCAATAAAACTGATCCAAAAT
GGTGTCACTATCTCCAAGGTTACACAAAATGTGGAGAATGTGGCGATAGA
GAGCAGTTCATGCAAGAGAATGGAGAGCTGGTGTTTCCGTGTAAAAGATC
ACCATTCATCACTTGGAAGCATTATGTTTGTGATGGGAGAGAGCATTGTG
TGGATGGGAGTGATGAACATGATTGTCCTGAATatttgTGTCCATACGAA
GTGATTGGTGGACAATCTTGGTTACCAAGCAAACCAAACACAACAAACCG
GTTGCCATGCCAACTACTTCACTCTTCATTCaaagGGGAAACAATCAGAT
TTTGCAATAACGAAAGTCGATGGCAAAAGGTTGATTACTGCGGATGCACA
AGAGCTCAAATTTCTCAACTACCACGGGATATGACATTGGAGAAAGCGAA
TGTCACCTTCATTGGACAGATCACAGAGGAAATACTCCTGGAAGTTGAAA
TGTCACCTCGCAAAGAAATATTCCTTCGTGAAATGATCCACATTCTCAAT
TTTCTGATGAACACAACACAACAAGTGGTCGAAAAGCATTTTGAAACTTT
CGATGAACAAATTTTCTACAATGTAGCGCAAGTGTTATTCGGAAGATCGC
CTTGCACCAATGACGTTGTTGACATGTTAGAAAGTAAACTCAAAGATCTC
TTGGTGAAGATATCCGACAAATTTGGTGCTTATCGATGGCACAGAGTGCA
GATATTTCCACGAACTTTTTGGGAATCCTTTATTGCGAGTTCTTCAGAAA
ATTCACATCAATTCACAAACAACGAAGTTCTGCTCAATGTTTCATTATCG
ATCATGGAAACAAAGTACATCGAGATTTATCAATCACCCATCTGTATGGC
ATGTACGTGTTACGGCCCTGATCGGTTCATCTGTTACTTCCGAACCGCCT
GGGCGAATGGTGACACATGCCGTGGTAGAGAAGAATGTACTCAAATGATT
AAGAAGGAAAAAATAAGAGAAGCCTGTTCCAATCCTGAATCTCTCCCTTG
TCCATCCGGTATTCATGAACAAACGAAACCATGGCAACAAGGAGATTGTC
ACGTGACCTGTTCAGCACGTGATTACCAGATTCATCCAATCATCACCAAT
AAAACTGATCCAAAATGGTGTCACTATCTCCAAGGTTACACAAAATGTGG
AGAATGTGGCGATAGAGAGCAGTTCATGCAAGAGAATGGAGAGCTGGTGT
TTCCGTGTAAAAGATCACCATTCATCACTTGGAAGCATTATGTTTGTGAT
GGGAGAGAGCATTGTGTGGATGGGAGTGATGAACATGATTGTCCTGAATa
tttgTGTCCATACGAAGTGATTGGTGGACAATCTTGGTTACCAAGCAAAC
CAAACACAACAAACCGGTTGCCATGCCAACTACTTCACTCTTCATTCaaa
gGGGAAACAATCAGATTTTGCAATAACGAAAGTCGATGGCAAAAGGTTGA
TTACTGCGGATGCACAAGAGCTCAAATTTCTCAACTACCACGGGATATGA
CATTGGAGAAAGCGAATGTCACCTTCATTGGACAGATCACAGAGGAAATA
CTCCTGGAAGTTGAAATGTCACCTCGCAAAGAAATATTCCTTCGTGAAAT
GATCCACATTCTCAATTTTCTGATGAACACAACACAACAAGTGGTCGAAA
AGCATTTTGAAACTTTCGATGAACAAATTTTCTACAATGTAGCGCAAGTG
TTATTCGGAAGATCGCCTTGCACCAATGACGTTGTTGACATGTTAGAAAG
TAAACTCAAAGATCTCTTGGTGAAGATATCCGACAAATTTGGTGCTTATC
GATGGCACAGAGTGCAGATATTTCCACGAACTTTTTGGGAATCCTTTATT
GCGAGTTCTTCAGAAAATTCACATCAATTCACAAACAACGAAGTTCTGCT
CAATGTTTCATTATCGATCATGGAAACAAAGTACATCGAGATTTATCAAT
CACCCATCTGTATGGCATGTACGTGTTACGGCCCTGATCGGTTCATCTGT
TACTTCCGAACCGCCTGGGCGAATGGTGACACATGCCGTGGTAGAGAAGA
ATGTACTCAAATGATTAAGAAGGAAAAAATAAGAGAAGCCTGTTCCAATC
CTGAATCTCTCCCTTGTCCATCCGGTATTCATGAACAAACGAAACCATGG
CAACAAGGAGATTGTCACGTGACCTGTTCAGCACGTGATTACCAGATTCA
TCCAATCATCACCAATAAAACTGATCCAAAATGGTGTCACTATCTCCAAG
GTTACACAAAATGTGGAGAATGTGGCGATAGAGAGCAGTTCATGCAAGAG
AATGGAGAGCTGGTGTTTCCGTGTAAAAGATCACCATTCATCACTTGGAA
GCATTATGTTTGTGATGGGAGAGAGCATTGTGTGGATGGGAGTGATGAAC
ATGATTGTCCTGAATatttgTGTCCATACGAAGTGATTGGTGGACAATCT
TGGTTACCAAGCAAACCAAACACAACAAACCGGTTGCCATGCCAACTACT
TCACTCTTCATTCaaagGGGAAACAATCAGATTTTGCAATAACGAAAGTC
GATGGCAAAAGGTTGATTACTGCGGATGCACAAGAGCTCAAATTTCTCAA
CTACCACGGGATATGACATTGGAGAAAGCGAATGTCACCTTCATTGGACA
GATCACAGAGGAAATACTCCTGGAAGTTGAAATGTCACCTCGCAAAGAAA
TATTCCTTCGTGAAATGATCCACATTCTCAATTTTCTGATGAACACAACA
CAACAAGTGGTCGAAAAGCATTTTGAAACTTTCGATGAACAAATTTTCTA
CAATGTAGCGCAAGTGTTATTCGGAAGATCGCCTTGCACCAATGACGTTG
TTGACATGTTAGAAAGTAAACTCAAAGATCTCTTGGTGAAGATATCCGAC
AAATTTGGTGCTTATCGATGGCACAGAGTGCAGATATTTCCACGAACTTT
TTGGGAATCCTTTATTGCGAGTTCTTCAGAAAATTCACATCAATTCACAA
ACAACGAAGTTCTGCTCAATGTTTCATTATCGATCATGGAAACAAAGTAC
ATCGAGATTTATCAATCACCCATCTGTATGGCATGTACGTGTTACGGCCC
TGATCGGTTCATCTGTTACTTCCGAACCGCCTGGGCGAATGGTGACACAT
GCCGTGGTAGAGAAGAATGTACTCAAATGATTAAGAAGGAAAAAATAAGA
GAAGCCTGTTCCAATCCTGAATCTCTCCCTTGTCCATCCGGTATTCATGA
ACAAACGAAACCATGGCAACAAGGAGATTGTCACGTGACCTGTTCAGCAC
GTGATTACCAGATTCATCCAATCATCACCAATAAAACTGATCCAAAATGG
TGTCACTATCTCCAAGGTTACACAAAATGTGGAGAATGTGGCGATAGAGA
GCAGTTCATGCAAGAGAATGGAGAGCTGGTGTTTCCGTGTAAAAGATCAC
CATTCATCACTTGGAAGCATTATGTTTGTGATGGGAGAGAGCATTGTGTG
GATGGGAGTGATGAACATGATTGTCCTGAATatttgTGTCCATACGAAGT
GATTGGTGGACAATCTTGGTTACCAAGCAAACCAAACACAACAAACCGGT
TGCCATGCCAACTACTTCACTCTTCATTCaaagGGGAAACAATCAGATTT
TGCAATAACGAAAGTCGATGGCAAAAGGTTGATTACTGCGGATGCACAAG
AGCTCAAATTTCTCAACTACCACGGGATATGACATTGGAGAAAGCGAATG
TCACCTTCATTGGACAGATCACAGAGGAAATACTCCTGGAAGTTGAAATG
TCACCTCGCAAAGAAATATTCCTTCGTGAAATGATCCACATTCTCAATTT
TCTGATGAACACAACACAACAAGTGGTCGAAAAGCATTTTGAAACTTTCG
ATGAACAAATTTTCTACAATGTAGCGCAAGTGTTATTCGGAAGATCGCCT
TGCACCAATGACGTTGTTGACATGTTAGAAAGTAAACTCAAAGATCTCTT
GGTGAAGATATCCGACAAATTTGGTGCTTATCGATGGCACAGAGTGCAGA
TATTTCCACGAACTTTTTGGGAATCCTTTATTGCGAGTTCTTCAGAAAAT
TCACATCAATTCACAAACAACGAAGTTCTGCTCAATGTTTCATTATCGAT
CATGGAAACAAAGTACATCGAGATTTATCAATCACCCATCTGTATGGCAT
GTACGTGTTACGGCCCTGATCGGTTCATCTGTTACTTCCGAACCGCCTGG
GCGAATGGTGACACATGCCGTGGTAGAGAAGAATGTACTCAAATGATTAA
GAAGGAAAAAATAAGAGAAGCCTGTTCCAATCCTGAATCTCTCCCTTGTC
CATCCGGTATTCATGAACAAACGAAACCATGGCAACAAGGAGATTGTCAC
GTGACCTGTTCAGCACGTGATTACCAGATTCATCCAATCATCACCAATAA
AACTGATCCAAAATGGTGTCACTATCTCCAAGGTTACACAAAATGTGGAG
AATGTGGCGATAGAGAGCAGTTCATGCAAGAGAATGGAGAGCTGGTGTTT
CCGTGTAAAAGATCACCATTCATCACTTGGAAGCATTATGTTTGTGATGG
GAGAGAGCATTGTGTGGATGGGAGTGATGAACATGATTGTCCTGAATatt
tgTGTCCATACGAAGTGATTGGTGGACAATCTTGGTTACCAAGCAAACCA
AACACAACAAACCGGTTGCCATGCCAACTACTTCACTCTTCATTCaaagG
GGAAACAATCAGATTTTGCAATAACGAAAGTCGATGGCAAAAGGTTGATT
ACTGCGGATGCACAAGAGCTCAAATTTCTCAACTACCACGGGATATGACA
TTGGAGAAAGCGAATGTCACCTTCATTGGACAGATCACAGAGGAAATACT
CCTGGAAGTTGAAATGTCACCTCGCAAAGAAATATTCCTTCGTGAAATGA
TCCACATTCTCAATTTTCTGATGAACACAACACAACAAGTGGTCGAAAAG
CATTTTGAAACTTTCGATGAACAAATTTTCTACAATGTAGCGCAAGTGTT
ATTCGGAAGATCGCCTTGCACCAATGACGTTGTTGACATGTTAGAAAGTA
AACTCAAAGATCTCTTGGTGAAGATATCCGACAAATTTGGTGCTTATCGA
TGGCACAGAGTGCAGATATTTCCACGAACTTTTTGGGAATCCTTTATTGC
GAGTTCTTCAGAAAATTCACATCAATTCACAAACAACGAAGTTCTGCTCA
ATGTTTCATTATCGATCATGGAAACAAAGTACATCGAGATTTATCAATCA
CCCATCTGTATGGCATGTACGTGTTACGGCCCTGATCGGTTCATCTGTTA
CTTCCGAACCGCCTGGGCGAATGGTGACACATGCCGTGGTAGAGAAGAAT
GTACTCAAATGATTAAGAAGGAAAAAATAAGAGAAGCCTGTTCCAATCCT
GAATCTCTCCCTTGTCCATCCGGTATTCATGAACAAACGAAACCATGGCA
ACAAGGAGATTGTCACGTGACCTGTTCAGCACGTGATTACCAGATTCATC
CAATCATCACCAATAAAACTGATCCAAAATGGTGTCACTATCTCCAAGGT
TACACAAAATGTGGAGAATGTGGCGATAGAGAGCAGTTCATGCAAGAGAA
TGGAGAGCTGGTGTTTCCGTGTAAAAGATCACCATTCATCACTTGGAAGC
ATTATGTTTGTGATGGGAGAGAGCATTGTGTGGATGGGAGTGATGAACAT
GATTGTCCTGAATatttgTGTCCATACGAAGTGATTGGTGGACAATCTTG
GTTACCAAGCAAACCAAACACAACAAACCGGTTGCCATGCCAACTACTTC
ACTCTTCATTCaaagGGGAAACAATCAGATTTTGCAATAACGAAAGTCGA
TGGCAAAAGGTTGATTACTGCGGATGCACAAGAGCTCAAATTTCTCAACT
ACCACGGGATATGACATTGGAGAAAGCGAATGTCACCTTCATTGGACAGA
TCACAGAGGAAATACTCCTGGAAGTTGAAATGTCACCTCGCAAAGAAATA
TTCCTTCGTGAAATGATCCACATTCTCAATTTTCTGATGAACACAACACA
ACAAGTGGTCGAAAAGCATTTTGAAACTTTCGATGAACAAATTTTCTACA
ATGTAGCGCAAGTGTTATTCGGAAGATCGCCTTGCACCAATGACGTTGTT
GACATGTTAGAAAGTAAACTCAAAGATCTCTTGGTGAAGATATCCGACAA
ATTTGGTGCTTATCGATGGCACAGAGTGCAGATATTTCCACGAACTTTTT
GGGAATCCTTTATTGCGAGTTCTTCAGAAAATTCACATCAATTCACAAAC
AACGAAGTTCTGCTCAATGTTTCATTATCGATCATGGAAACAAAGTACAT
CGAGATTTATCAATCACCCATCTGTATGGCATGTACGTGTTACGGCCCTG
ATCGGTTCATCTGTTACTTCCGAACCGCCTGGGCGAATGGTGACACATGC
CGTGGTAGAGAAGAATGTACTCAAATGATTAAGAAGGAAAAAATAAGAGA
AGCCTGTTCCAATCCTGAATCTCTCCCTTGTCCATCCGGTATTCATGAAC
AAACGAAACCATGGCAACAAGGAGATTGTCACGTGACCTGTTCAGCACGT
GATTACCAGATTCATCCAATCATCACCAATAAAACTGATCCAAAATGGTG
TCACTATCTCCAAGGTTACACAAAATGTGGAGAATGTGGCGATAGAGAGC
AGTTCATGCAAGAGAATGGAGAGCTGGTGTTTCCGTGTAAAAGATCACCA
TTCATCACTTGGAAGCATTATGTTTGTGATGGGAGAGAGCATTGTGTGGA
TGGGAGTGATGAACATGATTGTCCTGAATatttgTGTCCATACGAAGTGA
TTGGTGGACAATCTTGGTTACCAAGCAAACCAAACACAACAAACCGGTTG
CCATGCCAACTACTTCACTCTTCATTCaaagGGGAAACAATCAGATTTTG
CAATAACGAAAGTCGATGGCAAAAGGTTGATTACTGCGGATGCACAAGAG
CTCAAATTTCTCAACTACCACGGGATATGACATTGGAGAAAGCGAATGTC
ACCTTCATTGGACAGATCACAGAGGAAATACTCCTGGAAGTTGAAATGTC
ACCTCGCAAAGAAATATTCCTTCGTGAAATGATCCACATTCTCAATTTTC
TGATGAACACAACACAACAAGTGGTCGAAAAGCATTTTGAAACTTTCGAT
GAACAAATTTTCTACAATGTAGCGCAAGTGTTATTCGGAAGATCGCCTTG
CACCAATGACGTTGTTGACATGTTAGAAAGTAAACTCAAAGATCTCTTGG
TGAAGATATCCGACAAATTTGGTGCTTATCGATGGCACAGAGTGCAGATA
TTTCCACGAACTTTTTGGGAATCCTTTATTGCGAGTTCTTCAGAAAATTC
ACATCAATTCACAAACAACGAAGTTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002936XLOC_002936Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005151-exon-sc0000051-1491911889:654107..654296TCONS_00005151-exon-sc0000051-1491911889:654107..654296Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:654107..654296TCONS_00005151-exon-sc0000051-1510915933:654107..654296Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:654107..654296TCONS_00005151-exon-sc0000051-1575043694:654107..654296Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:655810..656136TCONS_00005151-exon-sc0000051-1491911889:655810..656136Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:655810..656136TCONS_00005151-exon-sc0000051-1510915933:655810..656136Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:655810..656136TCONS_00005151-exon-sc0000051-1575043694:655810..656136Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:657729..657830TCONS_00005151-exon-sc0000051-1491911889:657729..657830Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:657729..657830TCONS_00005151-exon-sc0000051-1510915933:657729..657830Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:657729..657830TCONS_00005151-exon-sc0000051-1575043694:657729..657830Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:657985..658076TCONS_00005151-exon-sc0000051-1491911889:657985..658076Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:657985..658076TCONS_00005151-exon-sc0000051-1510915933:657985..658076Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:657985..658076TCONS_00005151-exon-sc0000051-1575043694:657985..658076Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:658372..658563TCONS_00005151-exon-sc0000051-1491911889:658372..658563Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:658372..658563TCONS_00005151-exon-sc0000051-1510915933:658372..658563Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:658372..658563TCONS_00005151-exon-sc0000051-1575043694:658372..658563Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:658901..658951TCONS_00005151-exon-sc0000051-1491911889:658901..658951Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:658901..658951TCONS_00005151-exon-sc0000051-1510915933:658901..658951Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:658901..658951TCONS_00005151-exon-sc0000051-1575043694:658901..658951Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:659263..659327TCONS_00005151-exon-sc0000051-1491911889:659263..659327Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:659263..659327TCONS_00005151-exon-sc0000051-1510915933:659263..659327Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:659263..659327TCONS_00005151-exon-sc0000051-1575043694:659263..659327Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1491911889:659751..659848TCONS_00005151-exon-sc0000051-1491911889:659751..659848Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1510915933:659751..659848TCONS_00005151-exon-sc0000051-1510915933:659751..659848Clytia hemisphaericaexon
TCONS_00005151-exon-sc0000051-1575043694:659751..659848TCONS_00005151-exon-sc0000051-1575043694:659751..659848Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005151-proteinTCONS_00005151-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:654107..659848 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0381017	0	0	0.0526913	0	0.0502337	0.188113	0.164628	0.203918	0.118757	0.26022	0.415773	0	0.443732	0.333335	0.615962	0.571213	0.290744	0.565022	0.982213	0.829193	0.313598	0.488753	1.51021	1.6099	0.482184	0.5146	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002172LDrepeatLR_classA_rpt
IPR001879GPCR_2_extracellular_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005151 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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