Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00003102-protein ID=TCONS_00003102-protein|Name=TCONS_00003102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp MNNGISSSSSRFTITKPFQKSQDSGTKEDVKLELLENQNTGSLDQIDLGF DKNASPTGDDQHVLALYSEDIHLKGGRFQSFLQNVTAYTATIPPANDSEA QPKQEVAKLGTLVGVYLPCIQNILGVILFIRLSWIVGTAGVLQSFSIVLI CCCC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M N N G I S S S S S R F T I T K P F Q K S Q D S G T K E D V K L E L L E N Q N T G S L D Q I D L G F D K N A S P T G D D Q H V L A L Y S E D I H L K G G R F Q S F L Q N V T A Y T A T I P P A N D S E A Q P K Q E V A K L G T L V G V Y L P C I Q N I L G V I L F I R L S W I V G T A G V L Q S F S I V L I C C C C 20 40 60 80 100 120 140 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..27
Blast
BLAST of TCONS_00003102-protein vs. Swiss-Prot (Human)
Match:
S12A6 (Solute carrier family 12 member 6 OS=Homo sapiens GN=SLC12A6 PE=1 SV=2)
HSP 1 Score: 98.9821 bits (245), Expect = 7.966e-25
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 0
Query: 10 SRFTITKPFQKSQDSGTKEDVKLELLENQNTGSLDQIDLGFDKNASPTGDDQHVLALYSEDIHLKGGRFQSFLQNVTAYTATIPPANDSE--------AQPKQEVAKLGTLVGVYLPCIQNILGVILFIRLSWIVGTAGVLQSFSIVLICCCC 154
S+ +IT + D G K+ L N + ++ D FDKN LAL+ E++ + + S L + YT A + E + + ++GT +GVYLPC+QNI GVILF+RL+W+VGTAGVLQ+F+IVLICCCC
Sbjct: 93 SQNSITGEHSQLLDDGHKKARNAYL----NNSNYEEGDEYFDKN----------LALFEEEMDTRP-KVSSLLNRMANYTNLTQGAKEHEEAENITEGKKKPTKTPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQAFAIVLICCCC 230
The following BLAST results are available for this feature:
BLAST of TCONS_00003102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M N N G I S S S S S R F T I T K P F Q K S Q D S G T K E D V K L E L L E N Q N T G S L D Q I D L G F D K N A S P T G D D Q H V L A L Y S E D I H L K G G R F Q S F L Q N V T A Y T A T I P P A N D S E A Q P K Q E V A K L G T L V G V Y L P C I Q N I L G V I L F I R L S W I V G T A G V L Q S F S I V L I C C C C 20 40 60 80 100 120 140 Expect = 7.97e-25 / Id = 38.56 Sequence S12A6
Match Name E-value Identity Description
S12A6 7.966e-25 38.56 Solute carrier family 12 member 6 OS=Homo sapiens ... [more]
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