Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00001342-protein ID=TCONS_00001342-protein|Name=TCONS_00001342-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp MFRTVFLGILCIYWCECSKQIWNHAAIGKAYAWQPFYEVSLMDERQCFGQ CVYNEKCLSFEVYQTVPRKVECRLFDFVYEYYTKFKELDMKVGSKIYSKP LEKVCTTCKSCLDYSKKGHLKNGVYEVDLLGTRRDVYCFMEGEGGGWMAF QRRYDGSVSFEDKEWAEYKDGFGDGSGEYWLGLETLHQLTSTQSYDLYAR AMDFSGVWESKRFAGFTIGSELMERYKFDFQSIYSGTQYSNHSLFERAKG MKFSTPTRDNDLYTPIPTCAIRFPGGWWFSDCHYDFMNGAYSQQEACDRA TGIHWYKRFGNNHNKCLKETLLMIREN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Expect = 1.3E-25 / Score = 101.1 Expect = 4.5E-44 / Score = 150.8 Score = 33.881 Score = Expect = 1.3E-40 / Score = 138.9 Expect = 7.6E-16 / Score = 57.5 Sequence SM00186 PF00147 PS51406 SSF56496 G3DSA:3.90.215.10 G3DSA:4.10.530.10
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain SMART SM00186 FBG_2 coord: 106..327 e-value: 1.3E-25 score: 101.1
IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain PFAM PF00147 Fibrinogen_C coord: 108..325 e-value: 4.5E-44 score: 150.8
IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain PROSITE PS51406 FIBRINOGEN_C_2 coord: 102..327 score: 33.881
IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain SUPERFAMILY 56496 Fibrinogen C-terminal domain-like coord: 105..326
IPR014716 Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 GENE3D 3.90.215.10 coord: 69..251 e-value: 1.3E-40 score: 138.9
IPR014715 Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2 GENE3D 4.10.530.10 coord: 252..318 e-value: 7.6E-16 score: 57.5
Blast
BLAST of TCONS_00001342-protein vs. Swiss-Prot (Human)
Match:
FCN2 (Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2)
HSP 1 Score: 122.865 bits (307), Expect = 1.542e-32
Identity = 74/221 (33.48%), Postives = 113/221 (51.13%), Query Frame = 0
Query: 106 TTCKSCLDYSKKGHLKNGVYEVDLLGTRR-DVYCFMEGEGGGWMAFQRRYDGSVSFEDKEWAEYKDGFGDGSGEYWLGLETLHQLTSTQSYDLYARAMDFSGVWESKRFAGFTIGSELMERYKFDFQSIYSGTQYSNHSLFERAKGMKFSTPTRDNDLYTPIPTCAIRFPGGWWFSDCHYDFMNGAYSQQEACDRATGIHWYKRFGNNHNKCLKETLLMIR 325
T ++C D +GH +G + + L R V C M+ +GGGW FQRR DGSV F ++WA YK GFG GE+WLG + +H LT+ + +L +DF ++ ++ F + E E+Y + G+ + + FST +DNDL T CA+ F G WW+ +CH +NG Y + A GI+W + G +N K + + +R
Sbjct: 100 TGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFY-RDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADE-AEKYNLVLGAFVEGSAGDSLTFHNN---QSFSTKDQDNDLNT--GNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINW--KSGKGYNYSYKVSEMKVR 311
The following BLAST results are available for this feature:
BLAST of TCONS_00001342-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M F R T V F L G I L C I Y W C E C S K Q I W N H A A I G K A Y A W Q P F Y E V S L M D E R Q C F G Q C V Y N E K C L S F E V Y Q T V P R K V E C R L F D F V Y E Y Y T K F K E L D M K V G S K I Y S K P L E K V C T T C K S C L D Y S K K G H L K N G V Y E V D L L G T R R D V Y C F M E G E G G G W M A F Q R R Y D G S V S F E D K E W A E Y K D G F G D G S G E Y W L G L E T L H Q L T S T Q S Y D L Y A R A M D F S G V W E S K R F A G F T I G S E L M E R Y K F D F Q S I Y S G T Q Y S N H S L F E R A K G M K F S T P T R D N D L Y T P I P T C A I R F P G G W W F S D C H Y D F M N G A Y S Q Q E A C D R A T G I H W Y K R F G N N H N K C L K E T L L M I R E N 50 100 150 200 250 300 Expect = 1.54e-32 / Id = 33.48 Sequence FCN2
Match Name E-value Identity Description
FCN2 1.542e-32 33.48 Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2 [more]
back to top