TCONS_00000939-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000939-protein
Unique NameTCONS_00000939-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length532

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000939-protein ID=TCONS_00000939-protein|Name=TCONS_00000939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
MASQKSMALFLGIIVTFCSSLNEMYFTASELKDLVSFERDIGAEFLAYYQ
RETARLDRLEWFLNDVEMLHNRGLTKDIVISNPPDSYKLLKRFLTDWKDL
DWIRTSEESLRHFEVLTHYQKGITGFKESNELRGSHLLLFRLQDTYKLSV
SEMVSGLRQPAHELSYDDIHDIAMYANHFWMFQHGIEWASYVTRQFENLE
VADDLTLGQYTRLSDIYDIISWGNFKLRNYSEAIKASKKALKLDRTGKRA
IKRKENIGWYESYLVSGIHPEGTVEPSNEDPLNRTLQEKRCRREEILDQE
YVDTLFCKYHTPHPQFYLKPLKQERVYHEPRIDLYHGILSDFEVDHIKES
ARMKLHFAQVYDVDTGKLRVAEYRTSKNTWLHPYNDSVVARVINRVGALG
NLDMTYSEPLQVANYGIGGNYEAHYDFAEPPHDSSIFGAYDFGNRIATML
FYFETVERGGDTTFIKVRPGISTSAVKGSGVFWHNLKKNGEGDFETKHAA
CPVLLGEKWVSNLWIHEHGQEFRHPCSLNPDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000564XLOC_000564Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000939TCONS_00000939Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006620Pro_4_hyd_alph
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR013547Pro_4_hyd_alph_N
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491oxidoreductase activity
GO:0004656procollagen-proline 4-dioxygenase activity
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0005506 iron ion binding
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0004656 procollagen-proline 4-dioxygenase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006620Prolyl 4-hydroxylase, alpha subunitSMARTSM00702p4hccoord: 330..516
e-value: 3.7E-48
score: 176.0
NoneNo IPR availableGENE3D2.60.120.620coord: 320..523
e-value: 6.0E-30
score: 104.0
IPR005123Oxoglutarate/iron-dependent dioxygenasePFAMPF136402OG-FeII_Oxy_3coord: 410..516
e-value: 2.6E-12
score: 47.4
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 405..517
score: 10.784
IPR013547Prolyl 4-hydroxylase alpha-subunit, N-terminalPFAMPF08336P4Ha_Ncoord: 29..157
e-value: 4.8E-20
score: 71.8

Blast
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BLAST of TCONS_00000939-protein vs. Swiss-Prot (Human)
Match: P4HA2 (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 6.209e-83
Identity = 182/540 (33.70%), Postives = 270/540 (50.00%), Query Frame = 0 
Query:    8 ALFLGIIVTFCSSLNEMYFTASELKDLVSFERDIGAEFLAYYQRETARLDRLEWFLNDVEMLHNRGLT-KDIVISNPPDSYKLLKRFLTDWKDLDWIRTSEESLRHFEVLTHYQKGITGFKESNELRGSHLLLFRLQDTYKLSVSEMVSGLRQPAHE----LSYDDIHDIAMYANHFWMFQHGIEWASYVTRQFENLEVADDLTLGQYTRLSDIYDIISWGNFKLRNYSEAIKASKKALKLDRTGKRAIKRKENIGWYESYL-------------VSGIHPEGTVEPSNEDPLNRTLQEKRCRREEI-LDQEYVDTLFCKYH--TPHPQFYLKPLKQERVYHEPRIDLYHGILSDFEVDHIKESARMKLHFAQVYDVDTGKLRVAEYRTSKNTWLHPYNDSVVARVINRVGALGNLDMTYSEPLQVANYGIGGNYEAHYDFAEPPHDSSIFGAYDFGNRIATMLFYFETVERGGDTTFIKVRPGISTSAVKGSGVFWHNLKKNGEGDFETKHAACPVLLGEKWVSNLWIHEHGQEFRHPC 526
            AL +           E + +   + DL+  E+++      Y   E A+L +++ + N +E L ++     +  +++P ++YKL+KR  TDW  L+ +   ++S   F      Q+    F    +  G+   L RLQDTY+L    +  G   P  +    LS DD   +   A +   + H + W   V +Q +  E A        T  S + D +S+  F+L +   A++ +++ L LD + +RA     N+ ++E  L                  PEG  E   +    R + E  CR E + L       LFC+YH     PQ  + P K+E  +  P I  Y+ ++SD E++ IKE A+ KL  A V D  TG L VA YR SK++WL   +D VVARV  R+  +  L +  +E LQVANYG+GG YE H+DF+    +   F     GNR+AT L Y   VE GG T F  +  G +    KG+ VFW+NL ++GEGD+ T+HAACPVL+G KWVSN W HE GQEF  PC
Sbjct:    7 ALLMAWFGVLSCVQAEFFTSIGHMTDLIYAEKELVQSLKEYILVEEAKLSKIKSWANKMEALTSKSAADAEGYLAHPVNAYKLVKRLNTDWPALEDL-VLQDSAAGFIANLSVQRQF--FPTDEDEIGAAKALMRLQDTYRLDPGTISRG-ELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGEEAT-------TTKSQVLDYLSYAVFQLGDLHRALELTRRLLSLDPSHERA---GGNLRYFEQLLEEEREKTLTNQTEAELATPEGIYERPVDYLPERDVYESLCRGEGVKLTPRRQKRLFCRYHHGNRAPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSR-NDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDL--GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPC 529
The following BLAST results are available for this feature:
BLAST of TCONS_00000939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P4HA26.209e-8333.70Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapie... [more]
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