Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000663-protein ID=TCONS_00000663-protein|Name=TCONS_00000663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp FQMKIENNENNETVENESYRNPSPPPLTDAEKESVTGDLIGNTIFSQRWV LDVLLKLYKHEEDTIYTSLVENIKNEEKEQGSEHTSDNNERFLKDDFEND LCQLWDMTANSEVALFITEHDSKNILLDALRQTQSPRLMEICFGILGNLF CVKEIGSSLSQDGEMRCEILSYLTVMDALSLVELTRLLCTCLSCHSTLLL WVNDCCQGKNLEHLLYLLNNTLNVTLLCHVVKNLEIIFDECEDPLDSFIT SEFIDGVIESFDSLNEKGDRVEYLVSMIYLLQILTTNNKGNEIISNKKET LLHLFSKYYHLADVKGGCEMTESNRLTIYASILSILDSLVSEHKEIVSEK NRKFVQQSVEYFSRYITDELQDENTNEFQVVVLCFEHLASLLTKLESGVL NLYKEAVDKLMNAIKSSKFASTFLGYFTKPVLLVEFQS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR011989 | ARM-like |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 38..426 e-value: 2.1E-6 score: 25.9 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..33 |
Blast
BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)
Match: SAAL1 (Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.695e-36 Identity = 99/359 (27.58%), Postives = 184/359 (51.25%), Query Frame = 0 Query: 20 RNPSPPPL---TDAEKESVTGDLIGNTIFSQRWVLDVLLKLYKHEEDTIYTSLVENIKNEEKEQGSEHTSDNNERF--LKDDFENDLCQLWDMTANSEVALFITEHDSKNILLDALRQTQSPRLMEICFGILGNLFCVKEIGSSLSQDGEMRCEILSYLTVMDALSLVELTRLLCTCLSCHSTLLLWVNDCCQGKNL-EHLLYLLNNTLNVTLLCHVVKNLEIIFDECEDPLDSFITSEFI-DGVIESFDSLNE---------------------KGDRVEYLVSMIYLLQILTTNNKGNEIISNKKETLLHLFSKYYHLADVKGGCEMTES-----NRLTIYASILSILDSLVSEHKE 345
RNPSPPP + E+E GD IG+T++S+ W+ VL + L++ + E ++ +SD+ E+ L ++ EN++C++WDM+ + +VALF+ E ++ +I + L +++ PRL EIC GILGN+ C +EI S+S D + +L L D +L+E +RLL TCLS +WV + + + + ++++++ NV LL V + ++ +FD LD + E++ +G + D E + + E+L +++LQ+LTT + G + I + +T +++ + L C+ + + T+ AS+ S+L ++ + E
Sbjct: 3 RNPSPPPPGRDKEEEEEVAGGDCIGSTVYSKHWLFGVL------------SGLIQIVSPE----NTKSSSDDEEQLTELDEEMENEICRVWDMSMDEDVALFLQEFNAPDIFMGVLAKSKCPRLREICVGILGNMACFQEICVSISSDKNLGQVLLHCLYDSDPPTLLETSRLLLTCLSQAEVASVWVERIQEHPAIYDSICFIMSSSTNVDLLVKVGEVVDKLFD-----LDEKLMLEWVRNGAAQPLDQPQEESEEQPVFRLVPCILEAAKQVRSENPEWLDVYMHILQLLTTVDDGIQAIVHCPDTGKDIWNLLFDLV-CHEFCQSDDPPIILQEQKTVLASVFSVLSAIYASQTE 339
The following BLAST results are available for this feature:
BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match Name | E-value | Identity | Description | |
SAAL1 | 1.695e-36 | 27.58 | Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2 | [more] |
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