TCONS_00002325 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00002325
Unique Name	TCONS_00002325
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1721

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000019:728906..738539-
coding sequence from alignment at sc0000019:728906..738539-

transcript sequence

>TCONS_00002325 ID=TCONS_00002325|Name=TCONS_00002325|organism=Clytia hemisphaerica|type=transcript|length=1721bp
gTTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGAAATGGCG
TTagcttttaaaatctatttgtttattttgtttcaaatcaaaatttgttC
TTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCAAATGAGC
CATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATGCATCAGT
ATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTCAACCAGA
ATCGGgcaaaacaACTTGCGCGATGTATAACGTGTCAGACCAGTTCATGA
ACTTCACCACAACACCTAGTGACCCCTCAACTAAACACATCCTCTATAAT
AAACAGAAACATTCGTGTTTTGACTGGCTCCTAGCTGGTGAACAAAAAAA
TGGAATATATCCAATCGCTGGTCAACgacaagttcaatgtaattttgAAT
ACAAATCATGTAATGATGTTTTGAGTGCTGGCAATGAAGAAAGTGGATTT
TATTATCTTTACAAATCACCTGATCAACCACCAGTGTATGAAGAATGTAT
TTTCTATAAACGTGACTGTAAAGATTGGAAAGATGCTGGCTACACACAGA
CAGGTGTTTATACGATACGCATTGAAGGGTTTCGGTTGGTGGATGTGAAG
TGTGAAATGGATTTTGAAGATGGTGGTTGGATCATTATGCAACAAAGGTT
TGATGGATCAGTGGATTTTCACCTCTTTTGGGACGATTTCAAAGAAGGTT
TTGGTGACCTTAATGGTGAATTTTGGCTTGGAAATGAAATCGTTCATCAA
TTGACAAAGAATGGCGATTATGAGTGGTATTTCAAAGCCACCGCATTTGA
TGGTGATGTAGGAGAATCGAGATATTTTCCATTCGTTGTGGACAACGAGG
CAACCAATTACCTATCGACAGCAACAAAGTTGTCAGGTATAAGTTCACTG
ACCAACAATGTACAATTCACAACACGTGAAAGAGATAACGATCCTAGAGG
GGCCTTCAATTGTGCCTTTAAATATGGAAATGATAAGGGCGGTGGTTTCT
GGTATGGGGCGTGTGGTGCGTTTTATCCTAATGGCGAGTATCATAATAGC
GTGGGTGGAACTTATCAGAAGTATGTTTATTGGAATAATTACCGTGGTTA
CTCTGAATCGCTGAAGGAAACCATTATGATGATTCGGAAAAGATCATGCT
CGTGAATATGTGTAATCGAATACCTACACAACATTATAGTAAATTAGACT
CCTGTGTCACAGGCCCGCAGAGACCCTTacccccactggaaaatttgaca
aagatttttgTTGACTTCGATTTCGTTCCCATTcgaatttcaatatttaa
aaatttgcaCTCCAAACCTATCCCGATTGGGATATCAATGAGAGTTTTTG
TCCCTACTGAGGAAAGGTTCCACCttggctgtgagacaggggtgtacttt
AATCATAGCGTGGTATAAAAGAAAGCTGCAGCCGAAATGATGACGTTATT
TATTTCGTCATTATTAGATGTTCTATCTGCATCTCCGTGGTTTGTAAGAT
CTAAATAGAAGCTTTAAAAAATTATTACCATTGAATCAAAAGTATTTATA
GTATTTAAAACAACTACGTTTCAAGTCTGAAACTTTTCTCAGTGCCCTCT
TTAATTAGCTTGCTGGGTTACATTTTTATAAAGTTCAAGTagcttttcag
aaatttttggATTAAACAACA

Run BLAST on NCBI

protein sequence of TCONS_00002325-protein

>TCONS_00002325-protein ID=TCONS_00002325-protein|Name=TCONS_00002325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
FLKEKGRYGSSSLEMALAFKIYLFILFQIKICSCVLFNQFSINKLPSNEP
LNVIEVEKVGQPRCISICHYDKKCLTMIISQPESGKTTCAMYNVSDQFMN
FTTTPSDPSTKHILYNKQKHSCFDWLLAGEQKNGIYPIAGQRQVQCNFEY
KSCNDVLSAGNEESGFYYLYKSPDQPPVYEECIFYKRDCKDWKDAGYTQT
GVYTIRIEGFRLVDVKCEMDFEDGGWIIMQQRFDGSVDFHLFWDDFKEGF
GDLNGEFWLGNEIVHQLTKNGDYEWYFKATAFDGDVGESRYFPFVVDNEA
TNYLSTATKLSGISSLTNNVQFTTRERDNDPRGAFNCAFKYGNDKGGGFW
YGACGAFYPNGEYHNSVGGTYQKYVYWNNYRGYSESLKETIMMIRKRSCS

Run BLAST on NCBI

transcript from alignment at sc0000019:728906..738539-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00002325 ID=TCONS_00002325|Name=TCONS_00002325|organism=Clytia hemisphaerica|type=transcript|length=9634bp|location=Sequence derived from alignment at sc0000019:728906..738539- (Clytia hemisphaerica)
GTTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGAAATGGCG
TTAGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCAAAATTTGTTC
TTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCAAATGAGC
CATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATGCATCAGT
ATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTCAACCAGA
ATCGGGTATGCTTTATTTGATACAGTTATAGCCTAAAAACTAGTCTGCTT
TACTGTTTGATAAATTATTTAATTATGATAAAAAAAGACTCGTATCAGCA
TGATTGAAATAAACAATAACTTCTTTTGCAGTTTTTTAATTTTGTTTTGG
AAGCTGGACTTAAAAAAATATTTTACGAATTTTAATTCTTCGGTATACTT
GGAACATAATGCGCATACGAGATATCTCGTCATCAGTATTTTTGGTACAG
AACGCGATGACGATATACCTCGGCATCAGTATTTTTGGCACGGAACGCAA
TGACGAGATACCTCGGCATCAGTTTTTTGGCACGGAACGCGATGACGATA
TATCTCGTCATCGGTCGTTAAAGGGTTATACTATTTTCCATTTTGCAATC
TGTTACATGTGAACTAACTATTCAAGTTTTATTGAATTAAAGGGACATTA
AAGTACTGACGAAATTTGTAAACAAATCGTATGCAGCGGGATACAAAATC
AAAACAAATGTCACATGCATAGACGTAGCGAGATACCCTGCAAAATTTAC
GAGGGAGTGCAGACGTTTATGACATATTTATTATCTTTTGATAAAACAAA
GACAATAATTACAGTGTCGTAAAAACCGCTCTCATCCATAAATGCAGGGT
ATCTCGCTACGCCTGACCGGTTCAAAATAAAGAATTAAAAGAAATATGAC
TGACTTTGATTGTTTCAATTGTTTCAAAAGTTTAACATTCAATAATAAAA
TATTAACGTGATTTTGGGAATATTTAATTGAAAGTTGGTTTAAACACCGT
CATATTGTATTCCCTCATATTTAATTAATATGGAATTTTTACGGATTGCA
ATTTTCGTGATAAAAATCGACAAGCTTCGGAAATAAGTCTTGATGACACC
CACGTATTAATGAACCGGTCAATCTCACCCCGGCTCTGACCGGTAAAAAA
TATTTCCACTGATGGCTCTGACCATAGTCAAAAGATCGGTTACGCAGATT
TGGAGATAAAACTTTTGTTTTGAGTTCCTTGACAGCTTGACACTTTTAAC
AAAAAATTGTCTTTATAAGTTGCTTTTGAATTTATTCTATCAACAGTAAT
TAGCAATTTAGTTACAAAAATGACGTTATGAACCTTAAAAAGACGTTAAT
AAAATTTTATATTACCCTCTTTTAAAAACGTGCTCATGCAATATACACCT
CGGGTAACTTAATACATGTCCCAGAATTGCATTAATTTTTCCGCCCCAGT
TCCAGTCCCTAAACCATAACAAACTATACATTTTTGGAAACATATTTGGA
TGTAGAATACCGTATCAGTGAACTCATCAAGAGGAAGAGAATTTTTTTTT
GAAAATTTGAAAATTTGCTGATGTCAGCATTTTATCGCAAAAAATTCGAA
TTCTTGTAATTTCTGCTGACGTCATTATTTTGGGAAATACTTTCAAAAAA
TTTTGAAACATCTCAATGTAATTTATCACTGGTCCAAATTTCATAAAGTT
TCGATGTCTAGATCTCGAGATATTTTGGTTTAAATATTAAAAATTATCAA
TATTTTTTGCTGAGTCAGCAGTTTTTCAGCATACTTACCCACTTTAAAAA
TGAATTATCTTGTGATCTAGACATCGAAAGTTAACAAACCATACCATTTC
TGGATACTACTAATTCAGGGCTATCTAGCTGTGTGAATAATTTTTTCTAG
AAATGCTCCTAGGAAAATGCTGACGTCATCGGAAAACGCCCAAAACGTCG
ATTTTTCGCCTTAAAAATGCTATTTCTCGGAATCAGGTGGTCGAAAATCA
ATAAATAACCCGATTTTCTTTATCTACTTTTCACGCTGAATCCGTTGGGA
GCCTCAGATATTTGATTTTCAGACTTCGAACCGTTTACCGTTAGTAAAGG
GGGGATAAGTTCTATCCATTAACTAAAAATCGATTCACTCGAAGACTGCA
GGAGATTCGAAGGGCAAAATTTTTTTGTCAATTCTACACCCTATTAGGAG
CATAATATCAAAAATTTGCCCTGATCTAAGGGGTGCCCTACATAAACCAT
TTTTAAGGCCTTTTTTGAATCTCGGACGCTGGTCTACATGAGCACAAGCA
ATGAGTTACCAATGCAGTCGTGTTCCAGAATCTTTTTAGAGCAAAAAAGT
CGTGTGCCATAAAGGCTCATCATGAACTTCTTTCAACACAATTTCAAATG
TTTACCAAAAATTAATGAAACCAAAAGTTTAAAGAAGTTTTTTCTCCGTG
CTTTATGTCAAAAACACGGGCTACAAAATTATATCACTGCGGTCAAAACA
TGTAATTACTCGAAATAATTCACGTGATTTTATTCCCATGTTACTTGCTT
TACACAACTTACAGCTGATAACTATATTAATTAGTGTCAATAAATTCGAA
CCAATCAGAAATACCATTTAACAAGCACATAAAAATTTTGAGTAAAAGCG
TGATTTGTCTTTAGCCTATAATTCTGCAACCTATGTATTGAGAAAATATC
GTCCCATGTGGAAAACTCCACTCTAACTTTTGTCCCCGCTGAAAATAATC
AGATAAGCAAATCCTCACTGAAAGATATTGTGATATTTTTCCTATCCCCA
CTGAATTTTCTGGCTAGAAAACAATGAAATTCAAATCCCCAGCCATAAAG
AAACATGGGAATATCAATCCGCATCGACTTTTAGTCCTTTATTTTTACCC
CCATCGGCAGATAGAATCCCATCGGGTATGTTAGAAGTAACCTGATAACA
GCTGTTCATGATTTTCTTACGTGCACGGTAAACCTCTGAAGGCACTTGAA
AATTATATATCTGAGGAAAATAGTCCTCCTGCTGAAAATNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACGATTTCGAGATT
GCATATTCGTCAGATTGTTATGTTTTCACCCATCCCTTTAGAGCTTCAGC
GTGGTGGGCAGAAAACAACCACAATCTGATCTCAGGTCTGTTAGAAGGGG
GTGTTTACATGCAACAATTTACAAACTCTCCACATTATTTCCTGATTTTT
TTTTCCAGGCAAAACAACTTGCGCGATGTATAACGTGTCAGACCAGTTCA
TGAACTTCACCACAACACCTAGTGACCCCTCAACTAAACACATCCTCTAT
ACTAAACAGAAGNTCATGAACTTCACCACAACACCTAGTGACCCCTCAAC
TAAACACATCCTCTATAATAAACAGAAACATTCGTGTTTTGACTGGCTCC
TAGCTGGTGAACAAAAAAATGGAATATATCCAATCGCTGGTCAACGACAA
GTTCAATGTAATTTTGAATACAAATCATGTAATGATGTTTTGAGTGCTGG
CAATGAAGAAAGTGGATTTTATTATCTTTACAAATCACCTGATCAACCAC
CAGTGTATGAAGAATGTATTTTCTATAAACGTGACTGTAAAGATTGGAAA
GATGCTGGCTACACACAGACAGGTGTTTATACGATACGCATTGAAGGGTT
TCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAAGATGGTGGTTGGA
TCATTATGCAACAAAGGTAGATTCTATAATGTCTTTAAGCGATTCTAATG
AAAAACATTTTCTAGGGTTCGTGAAAAAAGGCATCTTAGCTATAAGTTTG
GAAATTTGATGTATACACCCAGGGGGATTAGGCAGGTCAAGGGTACGGGT
ATGTGTTACCCTTGTGTATGTCTTTTTGGAACCTGACAGTCCCTTTAGGG
GGGATCTCAGCCCCATAACGGTTCGGAACAAAGGAAATTTCAATTTTTTG
CCCCTAAGTATACACTGTTTCAAGATCTCATGTCTAGTTTCTTTCGTTTT
CGTCCTATTGACAACACGATTTTGAACAAGAAGGTCAAATCATCAAAATT
ATTGCACTCCTTTAGAGCAGAGTGTAGGAATAAAATAGATTTTATGAGAT
TTAATGAATGCATCAAAGTTTGGGTTGTTTTTTAATGGTTCTGGTAAAAG
TGAAAATGTAAAAGGTATCAAAGTACACCCCCTTCTCACAGAACTGGAAT
TTTTTCAGTGGGGATAAAAATAACAGAAAAAAAATTCGATGGGGATTGAT
TCAGTGTGGATGGAAATTTTTTCCAGAGCGAGGATTGGTTTATTTGATTA
TTTTCGGTTGGGGACAAAAGTTGGACGATAATTTGCCACATGGCACGATA
TTTTGGCCCTTTCCAGTGGGAAAGCATCCCAGTGGGTCTGTGAAAAGCGG
GTGTCAAAGTTAACAAAGATAAAGTTGTATAAATTTTTCGTCCATATTCC
TNTGGGTCTGTGAGAAGCGGGTGTCAAAGTTAACAAAGATAAAGTTGTAT
AAATTTTTCGTCCATATTCCTTTTAGGTTTGATGGATCAGTGGATTTTCA
CCTCTTTTGGGACGATTTCAAAGAAGGTTTTGGTGACCTTAATGGTGAAT
TTTGGCTTGGAAATGAAATCGTTCATCAATTGACAAAGAATGGCGATTAT
GAGTGGTATTTCAAAGCCACCGCATTTGATGGTGATGTAGGAGAATCGAG
GTAAATGAGGGTCTATTACGAAACTAGTTTTCATGTCGAACAGACAAATC
GATAGTTTGACTGCTCATTAAAATCGAGCCTAAGAGCTCTAGGACCTGTA
ATTAATGGAATGGCTTAGGCCCATACTATATTTTAGTGAACTGAAACAAA
AAAATTAATTTGGACTACGTAATCAAAGATTTTTCTGAAATTGTTTTCCA
TGTTGGACTGCCACGGTTGAAACGTACACGGTTCCTCATCTGACGCGATA
CGATATAACTGCGTGCATCGAAACCCTGCTCATTTTGGCCATGTGAACCT
AGTTTTATTGTATGCCATGCAGAGCAGGACCGTTATACTGATTGTATAAC
AGCTTTGCCATGCATGGCAACGCGAATTTTGCCATGATATGTGTTCACAG
ATGTTTGTGATTAGGACAGCTTTTTGAAGGATTGTAGATTAGGACAGCTT
TTGGGAGGATTGTAGAGCTAATTTTAGGAGGTGACCTTAGAAGATAGACT
AGTAGATTAGTAGAGTTGTAGATAGGAAATTTATATAAGGAAAATCGGAT
TGTGGAAATTGGTAGAAGAGACAGAGGTAGTAAATTATGGCAGAAGAGTT
GTGTAGCAGATCAGAGTGTGGAGATTGGTTAAAGAAACAGAGGTGGTGGA
TTGTGGCAGAAGATTTGTGTAACAAATCAGAGTGAGGAGATAGGAAAGAG
AAACAGGGGTGATAAGTTGTGGGAGAAGAGTTATGTAGCAAAACAGAGTG
TGGAGATTGGTAAGGGAAATAGAGGTAGTGGTTTTTTTAACGAGTTGAGA
GGTGTGACAATGCAAGAAAAGAGCTTTTGTCATACTCTCGGGTACCTAAT
AGCCGGGGGGGGGGGGGCTAATAAATTTTTCCACCCAGGACATTCTTATT
CCAACCCCCCCTTATTGATTTTTGGGAAATTTTTTTTTGAAAGTTCCCTC
TTTTGCCCTAATTCTGCTGTATCAGCCTCCTTTTCTAACATTTTCCACCC
AGGACATTTTTATTCCAGCCCCCCCCCGCTTATTAAATTTTGAGATTTTT
TCCAACCCCCCTGCTTATTCCAAACCCCCCGGCTATTAGGTACCCGAGAG
TAGATGGCTGTTTGAAGGAAAGAATAGTGACAACTACATGTGTTGGCAAC
TAGATATAGCAGGAAAAGACCCTGGTCACATTAGCTTAGAGAACTAGTTA
ATAACCCCAAAACCCAACCCCAAATCCCAAATCCCAAACCCAACCACCAA
ACCCAACCCCTCATAGGAAAATGTTGGAAAATGGCTGATGGAGGGCTGCT
CTATCTCTTGACTCTGTGTTTTAATGCCTGCTATAACAAAACAATAGGGA
CAGGTCTAAAGGCCTGGATGTGATGGGAACACAAGTGAAGCATGTTCCCA
AAGTCCGGTGTGAATTTGCATTTTTGGCCATGTGAGCCTAATAAACCTGC
ATGTTGGCTGTATAAGGCGCTTTTTCGATGCTGTCGGGTTCACTCACATT
GCCAATATCGGTCTTAAAAACACAGCTAAAATCAGGTGGATACTACTTTT
TTTGAAGATACTAAATTAAACTAGCCGTATGCGCAACGTCACACGCTGTG
TGTCCCAATCCAGTGAGTCACTACACATCTTAAAAAACTCTAAGGAAGAA
AGATAGCGACCGATGATTTTGATTTTAGGAAATAAAGGAGAAAAAAGATA
ACATTGCATTGCAATTTTTAATCACAATTAAGTATATGGCTTGGAAAAAT
TATATTTTAGATCTTCTTAGCCATCGTGGCTAGCCATCGTGGTTGGACAT
TCGAGGGTGACTTTGAAAGATTTTAAAAAGTTTTGAAAGTGATAGGGAGC
CGCTATTGTAAACAGAAAATTTTAAAGAGCATCTGAATAAGAATTCTTCA
AAATGAAAAAAAAAATTGGGAAAAAGGTTGATTTTAACCCATCCAGCTCA
AGATTTCCTGTATAGAAAATAGTATCTTGGGGTCTCAAAGTTAGTCTATT
GGTAGGAAATTGAGATGGTTCAACGCCGTGAAGAGGAGGCTTTGTAGAGC
TTTGTTAGATTTTCGAAAACTTTTTACAGAACGTTGTAAACACACACGTT
TTAGCATATTAATATATAAATTAGAGAAACAATTTCAAAGTGAAAGTTTA
AAAGACCCTCTTGCTATACCCTTGAATGAAATAACTAATTTTACACACGC
ACAGTTCGCTTACTGGTTCAAAAGAATGCACATTCTTCAAAAAGACTAGA
GTTCAAACCGGGACAAAGTATGATATAAAGATGTTTTGAAAAGTTTTGAA
AGTGATAGGGAGCCGCTATTGTAAACAGAAAATTTTAAAGAGCATCTGAA
TAAGAACTCTTCAAAATGAAAAAAAAAATTGGGAAGAAGGTTGATTTTAA
CCCATCCAGCTCAAGATTTCCTGTATAGAAAATAGTATCTTGGGGTCTCA
AAGTTAGTCTAGTGCGGTAGGAAATTTAGATGGTTCAACGCCGTAAAGAG
GAGGCTTTGTAGAGCTTTGTTAGATTTTCGAAAAGTTTTTACAGAACGTT
GTAAACACACACGTTTAAGCGTCATTCTTCAAGAAAGACCAGAGTTCAAA
CCGGGACAAAGTATAATATAAAGATGTTTTGAAAAGTTTTGAAAGGGATA
GGTAGCCGCTATTGTAAACAGAAAGTTTTATAGAGCATCTGAATAAGAAT
TCTTCAAAATGAAAAATAAATTTGGGAAGAAGATTGATTTTAACCAATCC
TGCTCCAGATTTCCTGTATAGAAAATAGTATCTTGGGGTCTCAAAGTTAG
TCTAGTGGTAGGAAATTGAGATGGTTCAACGCCGTGAAGAGGAGGCTTTG
TAGAGCTTTGTTAGATCTTCGAAAACTTTTTACAGAACGTTGTAAACACA
CACGTTTTAGCGTATTAATATATAGATTTATATAATCACAATTTTCAGAA
AACAACAATAAATAACAATCATAAAAAACAAAAAGTATTCAAAAATATAA
AGAAATACAGGCTTTTGAAGATCAAAATTCTGTCAGTTATGACACGATTT
ACGTCAAGTTTTGTCGGAAACATAACATATCTTAAAATGTCCACATCTTT
TTTTGTGTTTGAGGTATAAGAATTCTATGCTTTTTCTGATGGTATCCAAT
CATTTTTGTTTAATTTGACATTCAAAAATCAAGAAATTTTGCCCACAACG
TCAGTTTTTTGGCCATAAAATCTTTTGCCAGACCGAATTCGTGGGTCCCC
TCTCAAAGAAGTCTCCAAATTCTATCAAGTTTCGAACCAATTACATGCGG
TTGTGTTCCAAAAAAGTGCTACATGTCCTAAGGGTTTGCCCCAAATAAAC
CCGGTGAATATCTCGCACACAGTAAATGCAGTTGAGTACAAACACATTGT
CGCCGGGTAGCTCAGTCGGTAGAGTATTCACCTTACAATCTAAGGTACGT
GGGTTCGAACCCCGGTCAACGCCAACTCAGCGGATGAGTAGCTTAGATTG
GGTAATCTGATCTAGGCGGTAAGTTACTGGGAGCTGAGAGTAGGTGTGGC
GCTCCACCTCAGCATTCGATCTCCCAGATCTAGCGCAAATAGAAAAGGGG
ATAGACTCCCTCACTCCCGGCTCCGCTGACAGCCACCAGATGAATATACT
TATTACTACTTACTTACAAACACTCAATAGGATGCTAAGAATGCACTGAA
TTCAAAGTCAGTAGAGCTAATTTGGGGGCACTAGCAAATATAAAGGAATG
TTCGTTTATCTGTATTTCTTTGTATTCTTTTTAGATATTTTCCATTCGTT
GTGGACAACGAGGCAACCAATTACCTATCGACAGCAACAAAGTTGTCAGG
TATAAGTTCACTGACCAACAATGTACAATTCACAACACGTGAAAGAGATA
ACGATCCTAGAGGGGCCTTCAATTGTGCCTTTAAATATGGAAATGATAAG
GGCGGTGGTTTCTGGTATGGGGCGTGTGGTGCGTTTTATCCTAATGGCGA
GTATCATAATAGCGTGGGTGGAACTTATCAGAAGTATGTTTATTGGAATA
ATTACCGTGGTTACTCTGAATCGCTGAAGGAAACCATTATGATGATTCGG
AAAAGATCATGCTCGTGAATATGTGTAATCGAATACCTACACAACATTAT
AGTAAATTAGACTCCTGTGTCACAGGCCCGCAGAGACCCTTACCCCCACT
GGAAAATTTGACAAAGATTTTTGTTGACTTCGATTTCGTTCCCATTCGAA
TTTCAATATTTAAAAATTTGCACTCCAAACCTATCCCGATTGGGATATCA
ATGAGAGTTTTTGTCCCTACTGAGGAAAGGTTCCACCTTGGCTGTGAGAC
AGGGGTGTACTTTAATCATAGCGTGGTATAAAAGAAAGCTGCAGCCGAAA
TGATGACGTTATTTATTTCGTCATTATTAGATGTTCTATCTGCATCTCCG
TGGTTTGTAAGATCTAAATAGAAGCTTTAAAAAATTATTACCATTGAATC
AAAAGTATTTATAGTATTTAAAACAACTACGTTTCAAGTCTGAAACTTTT
CTCAGTGCCCTCTTTAATTAGCTTGCTGGGTTACATTTTTATAAAGTTCA
AGTAGCTTTTCAGAAATTTTTGGATTAAACAACA

Coding sequence (CDS) from alignment at sc0000019:728906..738539-

>TCONS_00002325 ID=TCONS_00002325|Name=TCONS_00002325|organism=Clytia hemisphaerica|type=CDS|length=6015bp|location=Sequence derived from alignment at sc0000019:728906..738539- (Clytia hemisphaerica)
ATATTTTCCATTCGTTGTGGACAACGAGGCAACCAATTACCTATCGACAG
CAACAAAGTTGTCAGGTATAAGTTCACTGACCAACAATGTACAATTCACA
ACACGTGAAAGAGATAACGATCCTAGAGGGGCCTTCAATTGTGCCTTTAA
ATATGGAAATGATAAGGGCGGTGGTTTCTGGTATGGGGCGTGTGGTGCGT
TTTATCCTAATGGCGAGTATCATAATAGCGTGGGTGGAACTTATCAGAAG
TATGTTTATTGGAATAATTACCGTGGTTACTCTGAATCGCTGAAGGAAAC
CATTATGATGATTCGGAAAAGATCATGCTCGTGAGTTTGATGGATCAGTG
GATTTTCACCTCTTTTGGGACGATTTCAAAGAAGGTTTTGGTGACCTTAA
TGGTGAATTTTGGCTTGGAAATGAAATCGTTCATCAATTGACAAAGAATG
GCGATTATGAGTGGTATTTCAAAGCCACCGCATTTGATGGTGATGTAGGA
GAATCGAGATCCTCTATAATAAACAGAAACATTCGTGTTTTGACTGGCTC
CTAGCTGGTGAACAAAAAAATGGAATATATCCAATCGCTGGTCAACGACA
AGTTCAATGTAATTTTGAATACAAATCATGTAATGATGTTTTGAGTGCTG
GCAATGAAGAAAGTGGATTTTATTATCTTTACAAATCACCTGATCAACCA
CCAGTGTATGAAGAATGTATTTTCTATAAACGTGACTGTAAAGATTGGAA
AGATGCTGGCTACACACAGACAGGTGTTTATACGATACGCATTGAAGGGT
TTCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAAGATGGTGGTTGG
ATCATTATGCAACAAAGGCAAAACAACTTGCGCGATGTATAACGTGTCAG
ACCAGTTCATGAACTTCACCACAACACCTAGTGACCCCTCAACTAAACAC
TTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGAAATGGCGTT
AGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCAAAATTTGTTCTT
GTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCAAATGAGCCA
TTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATGCATCAGTAT
TTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTCAACCAGAAT
CGGATATTTTCCATTCGTTGTGGACAACGAGGCAACCAATTACCTATCGA
CAGCAACAAAGTTGTCAGGTATAAGTTCACTGACCAACAATGTACAATTC
ACAACACGTGAAAGAGATAACGATCCTAGAGGGGCCTTCAATTGTGCCTT
TAAATATGGAAATGATAAGGGCGGTGGTTTCTGGTATGGGGCGTGTGGTG
CGTTTTATCCTAATGGCGAGTATCATAATAGCGTGGGTGGAACTTATCAG
AAGTATGTTTATTGGAATAATTACCGTGGTTACTCTGAATCGCTGAAGGA
AACCATTATGATGATTCGGAAAAGATCATGCTCGTGAGTTTGATGGATCA
GTGGATTTTCACCTCTTTTGGGACGATTTCAAAGAAGGTTTTGGTGACCT
TAATGGTGAATTTTGGCTTGGAAATGAAATCGTTCATCAATTGACAAAGA
ATGGCGATTATGAGTGGTATTTCAAAGCCACCGCATTTGATGGTGATGTA
GGAGAATCGAGATCCTCTATAATAAACAGAAACATTCGTGTTTTGACTGG
CTCCTAGCTGGTGAACAAAAAAATGGAATATATCCAATCGCTGGTCAACG
ACAAGTTCAATGTAATTTTGAATACAAATCATGTAATGATGTTTTGAGTG
CTGGCAATGAAGAAAGTGGATTTTATTATCTTTACAAATCACCTGATCAA
CCACCAGTGTATGAAGAATGTATTTTCTATAAACGTGACTGTAAAGATTG
GAAAGATGCTGGCTACACACAGACAGGTGTTTATACGATACGCATTGAAG
GGTTTCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAAGATGGTGGT
TGGATCATTATGCAACAAAGGCAAAACAACTTGCGCGATGTATAACGTGT
CAGACCAGTTCATGAACTTCACCACAACACCTAGTGACCCCTCAACTAAA
CACTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGAAATGGC
GTTAGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCAAAATTTGTT
CTTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCAAATGAG
CCATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATGCATCAG
TATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTCAACCAG
AATCGGATATTTTCCATTCGTTGTGGACAACGAGGCAACCAATTACCTAT
CGACAGCAACAAAGTTGTCAGGTATAAGTTCACTGACCAACAATGTACAA
TTCACAACACGTGAAAGAGATAACGATCCTAGAGGGGCCTTCAATTGTGC
CTTTAAATATGGAAATGATAAGGGCGGTGGTTTCTGGTATGGGGCGTGTG
GTGCGTTTTATCCTAATGGCGAGTATCATAATAGCGTGGGTGGAACTTAT
CAGAAGTATGTTTATTGGAATAATTACCGTGGTTACTCTGAATCGCTGAA
GGAAACCATTATGATGATTCGGAAAAGATCATGCTCGTGAGTTTGATGGA
TCAGTGGATTTTCACCTCTTTTGGGACGATTTCAAAGAAGGTTTTGGTGA
CCTTAATGGTGAATTTTGGCTTGGAAATGAAATCGTTCATCAATTGACAA
AGAATGGCGATTATGAGTGGTATTTCAAAGCCACCGCATTTGATGGTGAT
GTAGGAGAATCGAGATCCTCTATAATAAACAGAAACATTCGTGTTTTGAC
TGGCTCCTAGCTGGTGAACAAAAAAATGGAATATATCCAATCGCTGGTCA
ACGACAAGTTCAATGTAATTTTGAATACAAATCATGTAATGATGTTTTGA
GTGCTGGCAATGAAGAAAGTGGATTTTATTATCTTTACAAATCACCTGAT
CAACCACCAGTGTATGAAGAATGTATTTTCTATAAACGTGACTGTAAAGA
TTGGAAAGATGCTGGCTACACACAGACAGGTGTTTATACGATACGCATTG
AAGGGTTTCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAAGATGGT
GGTTGGATCATTATGCAACAAAGGCAAAACAACTTGCGCGATGTATAACG
TGTCAGACCAGTTCATGAACTTCACCACAACACCTAGTGACCCCTCAACT
AAACACTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGAAAT
GGCGTTAGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCAAAATTT
GTTCTTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCAAAT
GAGCCATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATGCAT
CAGTATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTCAAC
CAGAATCGGATATTTTCCATTCGTTGTGGACAACGAGGCAACCAATTACC
TATCGACAGCAACAAAGTTGTCAGGTATAAGTTCACTGACCAACAATGTA
CAATTCACAACACGTGAAAGAGATAACGATCCTAGAGGGGCCTTCAATTG
TGCCTTTAAATATGGAAATGATAAGGGCGGTGGTTTCTGGTATGGGGCGT
GTGGTGCGTTTTATCCTAATGGCGAGTATCATAATAGCGTGGGTGGAACT
TATCAGAAGTATGTTTATTGGAATAATTACCGTGGTTACTCTGAATCGCT
GAAGGAAACCATTATGATGATTCGGAAAAGATCATGCTCGTGAGTTTGAT
GGATCAGTGGATTTTCACCTCTTTTGGGACGATTTCAAAGAAGGTTTTGG
TGACCTTAATGGTGAATTTTGGCTTGGAAATGAAATCGTTCATCAATTGA
CAAAGAATGGCGATTATGAGTGGTATTTCAAAGCCACCGCATTTGATGGT
GATGTAGGAGAATCGAGATCCTCTATAATAAACAGAAACATTCGTGTTTT
GACTGGCTCCTAGCTGGTGAACAAAAAAATGGAATATATCCAATCGCTGG
TCAACGACAAGTTCAATGTAATTTTGAATACAAATCATGTAATGATGTTT
TGAGTGCTGGCAATGAAGAAAGTGGATTTTATTATCTTTACAAATCACCT
GATCAACCACCAGTGTATGAAGAATGTATTTTCTATAAACGTGACTGTAA
AGATTGGAAAGATGCTGGCTACACACAGACAGGTGTTTATACGATACGCA
TTGAAGGGTTTCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAAGAT
GGTGGTTGGATCATTATGCAACAAAGGCAAAACAACTTGCGCGATGTATA
ACGTGTCAGACCAGTTCATGAACTTCACCACAACACCTAGTGACCCCTCA
ACTAAACACTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGA
AATGGCGTTAGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCAAAA
TTTGTTCTTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCA
AATGAGCCATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATG
CATCAGTATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTC
AACCAGAATCGGATATTTTCCATTCGTTGTGGACAACGAGGCAACCAATT
ACCTATCGACAGCAACAAAGTTGTCAGGTATAAGTTCACTGACCAACAAT
GTACAATTCACAACACGTGAAAGAGATAACGATCCTAGAGGGGCCTTCAA
TTGTGCCTTTAAATATGGAAATGATAAGGGCGGTGGTTTCTGGTATGGGG
CGTGTGGTGCGTTTTATCCTAATGGCGAGTATCATAATAGCGTGGGTGGA
ACTTATCAGAAGTATGTTTATTGGAATAATTACCGTGGTTACTCTGAATC
GCTGAAGGAAACCATTATGATGATTCGGAAAAGATCATGCTCGTGAGTTT
GATGGATCAGTGGATTTTCACCTCTTTTGGGACGATTTCAAAGAAGGTTT
TGGTGACCTTAATGGTGAATTTTGGCTTGGAAATGAAATCGTTCATCAAT
TGACAAAGAATGGCGATTATGAGTGGTATTTCAAAGCCACCGCATTTGAT
GGTGATGTAGGAGAATCGAGATCCTCTATAATAAACAGAAACATTCGTGT
TTTGACTGGCTCCTAGCTGGTGAACAAAAAAATGGAATATATCCAATCGC
TGGTCAACGACAAGTTCAATGTAATTTTGAATACAAATCATGTAATGATG
TTTTGAGTGCTGGCAATGAAGAAAGTGGATTTTATTATCTTTACAAATCA
CCTGATCAACCACCAGTGTATGAAGAATGTATTTTCTATAAACGTGACTG
TAAAGATTGGAAAGATGCTGGCTACACACAGACAGGTGTTTATACGATAC
GCATTGAAGGGTTTCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAA
GATGGTGGTTGGATCATTATGCAACAAAGGCAAAACAACTTGCGCGATGT
ATAACGTGTCAGACCAGTTCATGAACTTCACCACAACACCTAGTGACCCC
TCAACTAAACACTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATT
AGAAATGGCGTTAGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCA
AAATTTGTTCTTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCC
TCAAATGAGCCATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAG
ATGCATCAGTATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCA
GTCAACCAGAATCGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001229	XLOC_001229	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00002325-protein	TCONS_00002325-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000019	supercontig	sc0000019:728906..738539 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0703923	0.0457624	0	0	0.0632853	0.0500089	0.301668	0.564836	2.25409	1.73891	5.4914	1.59395	5.82076	5.4939	1.37234	1.10097	1.05687	0.992982	10.5758	8.14349	3.31222	3.31969	0.61878	0.929449	1.96501	2.04601	0.0643479	0.171685	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR002181	Fibrinogen_a/b/g_C_dom
IPR014715	Fibrinogen_a/b/g_C_2
IPR014716	Fibrinogen_a/b/g_C_1

Blast

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BLAST of TCONS_00002325 vs. Swiss-Prot (Human)
Match: ANGL6 (Angiopoietin-related protein 6 OS=Homo sapiens GN=ANGPTL6 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.341e-35
Identity = 84/229 (36.68%), Postives = 123/229 (53.71%), Query Frame = 3

Query:  525 QPPVYEECIFYKRDCKDWKDAGYTQTGVYTIRIEGFRLVDVKCEMDFEDGGWIIMQQRFDGSVDFHLFWDDFKEGFGDLNGEFWLGNEIVHQLTKNGDYEWYFKATAFDGDVGESRYFPFVVDNEATNYLSTATKLSGIS----SLTNNVQFTTRERDNDPRGAFNCAFKYGNDKGGGFWYGACGAFYPNGEYHNSVGG----TYQKYVYWNNYRGYSESLKETIMMIR 1187
             P V  + +   +DC + + AG+ Q+GVY +R+ G  +V V CE   E GGW ++Q+R DGSV+F   W  +K GFG  +GE+WLG E V+QLT  GD+E       + G    + Y  F ++ E+ +Y     +  G +    S  N+  F+T +RD D     NCA      + GG+WY AC     NG +H+  GG     YQ  VYW  +RG + SL++  M+IR
Sbjct:  246 HPAVPTKPVGPWQDCAEARQAGHEQSGVYELRV-GRHVVSVWCEQQLEGGGWTVIQRRQDGSVNFFTTWQHYKAGFGRPDGEYWLGLEPVYQLTSRGDHELLVLLEDWGGRGARAHYDGFSLEPESDHYRLRLGQYHGDAGDSLSWHNDKPFSTVDRDRDSYSG-NCALY----QRGGWWYHACAHSNLNGVWHH--GGHYRSRYQDGVYWAEFRGGAYSLRKAAMLIR 466

The following BLAST results are available for this feature:

BLAST of TCONS_00002325 vs. Swiss-Prot (Human)

BLAST of TCONS_00002325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ANGL6	6.341e-35	36.68	Angiopoietin-related protein 6 OS=Homo sapiens GN=...	[more]

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TCONS_00002325 (transcript) - C. hemisphaerica