XLOC_001229 (gene) - C. hemisphaerica

Overview
NameXLOC_001229
Unique NameXLOC_001229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:728906..738539-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001229 ID=XLOC_001229|Name=XLOC_001229|organism=Clytia hemisphaerica|type=gene|length=9634bp|location=Sequence derived from alignment at sc0000019:728906..738539- (Clytia hemisphaerica)
GTTTTCTGAAGGAGAAAGGAAGATATGGATCTAGTTCATTAGAAATGGCG TTAGCTTTTAAAATCTATTTGTTTATTTTGTTTCAAATCAAAATTTGTTC TTGTGTTTTATTCAACCAATTTTCAATCAACAAACTCCCCTCAAATGAGC CATTGAATGTTATCGAAGTTGAAAAAGTTGGGCAACCGAGATGCATCAGT ATTTGCCATTACGATAAAAAATGTTTGACAATGATAATCAGTCAACCAGA ATCGGGTATGCTTTATTTGATACAGTTATAGCCTAAAAACTAGTCTGCTT TACTGTTTGATAAATTATTTAATTATGATAAAAAAAGACTCGTATCAGCA TGATTGAAATAAACAATAACTTCTTTTGCAGTTTTTTAATTTTGTTTTGG AAGCTGGACTTAAAAAAATATTTTACGAATTTTAATTCTTCGGTATACTT GGAACATAATGCGCATACGAGATATCTCGTCATCAGTATTTTTGGTACAG AACGCGATGACGATATACCTCGGCATCAGTATTTTTGGCACGGAACGCAA TGACGAGATACCTCGGCATCAGTTTTTTGGCACGGAACGCGATGACGATA TATCTCGTCATCGGTCGTTAAAGGGTTATACTATTTTCCATTTTGCAATC TGTTACATGTGAACTAACTATTCAAGTTTTATTGAATTAAAGGGACATTA AAGTACTGACGAAATTTGTAAACAAATCGTATGCAGCGGGATACAAAATC AAAACAAATGTCACATGCATAGACGTAGCGAGATACCCTGCAAAATTTAC GAGGGAGTGCAGACGTTTATGACATATTTATTATCTTTTGATAAAACAAA GACAATAATTACAGTGTCGTAAAAACCGCTCTCATCCATAAATGCAGGGT ATCTCGCTACGCCTGACCGGTTCAAAATAAAGAATTAAAAGAAATATGAC TGACTTTGATTGTTTCAATTGTTTCAAAAGTTTAACATTCAATAATAAAA TATTAACGTGATTTTGGGAATATTTAATTGAAAGTTGGTTTAAACACCGT CATATTGTATTCCCTCATATTTAATTAATATGGAATTTTTACGGATTGCA ATTTTCGTGATAAAAATCGACAAGCTTCGGAAATAAGTCTTGATGACACC CACGTATTAATGAACCGGTCAATCTCACCCCGGCTCTGACCGGTAAAAAA TATTTCCACTGATGGCTCTGACCATAGTCAAAAGATCGGTTACGCAGATT TGGAGATAAAACTTTTGTTTTGAGTTCCTTGACAGCTTGACACTTTTAAC AAAAAATTGTCTTTATAAGTTGCTTTTGAATTTATTCTATCAACAGTAAT TAGCAATTTAGTTACAAAAATGACGTTATGAACCTTAAAAAGACGTTAAT AAAATTTTATATTACCCTCTTTTAAAAACGTGCTCATGCAATATACACCT CGGGTAACTTAATACATGTCCCAGAATTGCATTAATTTTTCCGCCCCAGT TCCAGTCCCTAAACCATAACAAACTATACATTTTTGGAAACATATTTGGA TGTAGAATACCGTATCAGTGAACTCATCAAGAGGAAGAGAATTTTTTTTT GAAAATTTGAAAATTTGCTGATGTCAGCATTTTATCGCAAAAAATTCGAA TTCTTGTAATTTCTGCTGACGTCATTATTTTGGGAAATACTTTCAAAAAA TTTTGAAACATCTCAATGTAATTTATCACTGGTCCAAATTTCATAAAGTT TCGATGTCTAGATCTCGAGATATTTTGGTTTAAATATTAAAAATTATCAA TATTTTTTGCTGAGTCAGCAGTTTTTCAGCATACTTACCCACTTTAAAAA TGAATTATCTTGTGATCTAGACATCGAAAGTTAACAAACCATACCATTTC TGGATACTACTAATTCAGGGCTATCTAGCTGTGTGAATAATTTTTTCTAG AAATGCTCCTAGGAAAATGCTGACGTCATCGGAAAACGCCCAAAACGTCG ATTTTTCGCCTTAAAAATGCTATTTCTCGGAATCAGGTGGTCGAAAATCA ATAAATAACCCGATTTTCTTTATCTACTTTTCACGCTGAATCCGTTGGGA GCCTCAGATATTTGATTTTCAGACTTCGAACCGTTTACCGTTAGTAAAGG GGGGATAAGTTCTATCCATTAACTAAAAATCGATTCACTCGAAGACTGCA GGAGATTCGAAGGGCAAAATTTTTTTGTCAATTCTACACCCTATTAGGAG CATAATATCAAAAATTTGCCCTGATCTAAGGGGTGCCCTACATAAACCAT TTTTAAGGCCTTTTTTGAATCTCGGACGCTGGTCTACATGAGCACAAGCA ATGAGTTACCAATGCAGTCGTGTTCCAGAATCTTTTTAGAGCAAAAAAGT CGTGTGCCATAAAGGCTCATCATGAACTTCTTTCAACACAATTTCAAATG TTTACCAAAAATTAATGAAACCAAAAGTTTAAAGAAGTTTTTTCTCCGTG CTTTATGTCAAAAACACGGGCTACAAAATTATATCACTGCGGTCAAAACA TGTAATTACTCGAAATAATTCACGTGATTTTATTCCCATGTTACTTGCTT TACACAACTTACAGCTGATAACTATATTAATTAGTGTCAATAAATTCGAA CCAATCAGAAATACCATTTAACAAGCACATAAAAATTTTGAGTAAAAGCG TGATTTGTCTTTAGCCTATAATTCTGCAACCTATGTATTGAGAAAATATC GTCCCATGTGGAAAACTCCACTCTAACTTTTGTCCCCGCTGAAAATAATC AGATAAGCAAATCCTCACTGAAAGATATTGTGATATTTTTCCTATCCCCA CTGAATTTTCTGGCTAGAAAACAATGAAATTCAAATCCCCAGCCATAAAG AAACATGGGAATATCAATCCGCATCGACTTTTAGTCCTTTATTTTTACCC CCATCGGCAGATAGAATCCCATCGGGTATGTTAGAAGTAACCTGATAACA GCTGTTCATGATTTTCTTACGTGCACGGTAAACCTCTGAAGGCACTTGAA AATTATATATCTGAGGAAAATAGTCCTCCTGCTGAAAATNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACGATTTCGAGATT GCATATTCGTCAGATTGTTATGTTTTCACCCATCCCTTTAGAGCTTCAGC GTGGTGGGCAGAAAACAACCACAATCTGATCTCAGGTCTGTTAGAAGGGG GTGTTTACATGCAACAATTTACAAACTCTCCACATTATTTCCTGATTTTT TTTTCCAGGCAAAACAACTTGCGCGATGTATAACGTGTCAGACCAGTTCA TGAACTTCACCACAACACCTAGTGACCCCTCAACTAAACACATCCTCTAT ACTAAACAGAAGNTCATGAACTTCACCACAACACCTAGTGACCCCTCAAC TAAACACATCCTCTATAATAAACAGAAACATTCGTGTTTTGACTGGCTCC TAGCTGGTGAACAAAAAAATGGAATATATCCAATCGCTGGTCAACGACAA GTTCAATGTAATTTTGAATACAAATCATGTAATGATGTTTTGAGTGCTGG CAATGAAGAAAGTGGATTTTATTATCTTTACAAATCACCTGATCAACCAC CAGTGTATGAAGAATGTATTTTCTATAAACGTGACTGTAAAGATTGGAAA GATGCTGGCTACACACAGACAGGTGTTTATACGATACGCATTGAAGGGTT TCGGTTGGTGGATGTGAAGTGTGAAATGGATTTTGAAGATGGTGGTTGGA TCATTATGCAACAAAGGTAGATTCTATAATGTCTTTAAGCGATTCTAATG AAAAACATTTTCTAGGGTTCGTGAAAAAAGGCATCTTAGCTATAAGTTTG GAAATTTGATGTATACACCCAGGGGGATTAGGCAGGTCAAGGGTACGGGT ATGTGTTACCCTTGTGTATGTCTTTTTGGAACCTGACAGTCCCTTTAGGG GGGATCTCAGCCCCATAACGGTTCGGAACAAAGGAAATTTCAATTTTTTG CCCCTAAGTATACACTGTTTCAAGATCTCATGTCTAGTTTCTTTCGTTTT CGTCCTATTGACAACACGATTTTGAACAAGAAGGTCAAATCATCAAAATT ATTGCACTCCTTTAGAGCAGAGTGTAGGAATAAAATAGATTTTATGAGAT TTAATGAATGCATCAAAGTTTGGGTTGTTTTTTAATGGTTCTGGTAAAAG TGAAAATGTAAAAGGTATCAAAGTACACCCCCTTCTCACAGAACTGGAAT TTTTTCAGTGGGGATAAAAATAACAGAAAAAAAATTCGATGGGGATTGAT TCAGTGTGGATGGAAATTTTTTCCAGAGCGAGGATTGGTTTATTTGATTA TTTTCGGTTGGGGACAAAAGTTGGACGATAATTTGCCACATGGCACGATA TTTTGGCCCTTTCCAGTGGGAAAGCATCCCAGTGGGTCTGTGAAAAGCGG GTGTCAAAGTTAACAAAGATAAAGTTGTATAAATTTTTCGTCCATATTCC TNTGGGTCTGTGAGAAGCGGGTGTCAAAGTTAACAAAGATAAAGTTGTAT AAATTTTTCGTCCATATTCCTTTTAGGTTTGATGGATCAGTGGATTTTCA CCTCTTTTGGGACGATTTCAAAGAAGGTTTTGGTGACCTTAATGGTGAAT TTTGGCTTGGAAATGAAATCGTTCATCAATTGACAAAGAATGGCGATTAT GAGTGGTATTTCAAAGCCACCGCATTTGATGGTGATGTAGGAGAATCGAG GTAAATGAGGGTCTATTACGAAACTAGTTTTCATGTCGAACAGACAAATC GATAGTTTGACTGCTCATTAAAATCGAGCCTAAGAGCTCTAGGACCTGTA ATTAATGGAATGGCTTAGGCCCATACTATATTTTAGTGAACTGAAACAAA AAAATTAATTTGGACTACGTAATCAAAGATTTTTCTGAAATTGTTTTCCA TGTTGGACTGCCACGGTTGAAACGTACACGGTTCCTCATCTGACGCGATA CGATATAACTGCGTGCATCGAAACCCTGCTCATTTTGGCCATGTGAACCT AGTTTTATTGTATGCCATGCAGAGCAGGACCGTTATACTGATTGTATAAC AGCTTTGCCATGCATGGCAACGCGAATTTTGCCATGATATGTGTTCACAG ATGTTTGTGATTAGGACAGCTTTTTGAAGGATTGTAGATTAGGACAGCTT TTGGGAGGATTGTAGAGCTAATTTTAGGAGGTGACCTTAGAAGATAGACT AGTAGATTAGTAGAGTTGTAGATAGGAAATTTATATAAGGAAAATCGGAT TGTGGAAATTGGTAGAAGAGACAGAGGTAGTAAATTATGGCAGAAGAGTT GTGTAGCAGATCAGAGTGTGGAGATTGGTTAAAGAAACAGAGGTGGTGGA TTGTGGCAGAAGATTTGTGTAACAAATCAGAGTGAGGAGATAGGAAAGAG AAACAGGGGTGATAAGTTGTGGGAGAAGAGTTATGTAGCAAAACAGAGTG TGGAGATTGGTAAGGGAAATAGAGGTAGTGGTTTTTTTAACGAGTTGAGA GGTGTGACAATGCAAGAAAAGAGCTTTTGTCATACTCTCGGGTACCTAAT AGCCGGGGGGGGGGGGGCTAATAAATTTTTCCACCCAGGACATTCTTATT CCAACCCCCCCTTATTGATTTTTGGGAAATTTTTTTTTGAAAGTTCCCTC TTTTGCCCTAATTCTGCTGTATCAGCCTCCTTTTCTAACATTTTCCACCC AGGACATTTTTATTCCAGCCCCCCCCCGCTTATTAAATTTTGAGATTTTT TCCAACCCCCCTGCTTATTCCAAACCCCCCGGCTATTAGGTACCCGAGAG TAGATGGCTGTTTGAAGGAAAGAATAGTGACAACTACATGTGTTGGCAAC TAGATATAGCAGGAAAAGACCCTGGTCACATTAGCTTAGAGAACTAGTTA ATAACCCCAAAACCCAACCCCAAATCCCAAATCCCAAACCCAACCACCAA ACCCAACCCCTCATAGGAAAATGTTGGAAAATGGCTGATGGAGGGCTGCT CTATCTCTTGACTCTGTGTTTTAATGCCTGCTATAACAAAACAATAGGGA CAGGTCTAAAGGCCTGGATGTGATGGGAACACAAGTGAAGCATGTTCCCA AAGTCCGGTGTGAATTTGCATTTTTGGCCATGTGAGCCTAATAAACCTGC ATGTTGGCTGTATAAGGCGCTTTTTCGATGCTGTCGGGTTCACTCACATT GCCAATATCGGTCTTAAAAACACAGCTAAAATCAGGTGGATACTACTTTT TTTGAAGATACTAAATTAAACTAGCCGTATGCGCAACGTCACACGCTGTG TGTCCCAATCCAGTGAGTCACTACACATCTTAAAAAACTCTAAGGAAGAA AGATAGCGACCGATGATTTTGATTTTAGGAAATAAAGGAGAAAAAAGATA ACATTGCATTGCAATTTTTAATCACAATTAAGTATATGGCTTGGAAAAAT TATATTTTAGATCTTCTTAGCCATCGTGGCTAGCCATCGTGGTTGGACAT TCGAGGGTGACTTTGAAAGATTTTAAAAAGTTTTGAAAGTGATAGGGAGC CGCTATTGTAAACAGAAAATTTTAAAGAGCATCTGAATAAGAATTCTTCA AAATGAAAAAAAAAATTGGGAAAAAGGTTGATTTTAACCCATCCAGCTCA AGATTTCCTGTATAGAAAATAGTATCTTGGGGTCTCAAAGTTAGTCTATT GGTAGGAAATTGAGATGGTTCAACGCCGTGAAGAGGAGGCTTTGTAGAGC TTTGTTAGATTTTCGAAAACTTTTTACAGAACGTTGTAAACACACACGTT TTAGCATATTAATATATAAATTAGAGAAACAATTTCAAAGTGAAAGTTTA AAAGACCCTCTTGCTATACCCTTGAATGAAATAACTAATTTTACACACGC ACAGTTCGCTTACTGGTTCAAAAGAATGCACATTCTTCAAAAAGACTAGA GTTCAAACCGGGACAAAGTATGATATAAAGATGTTTTGAAAAGTTTTGAA AGTGATAGGGAGCCGCTATTGTAAACAGAAAATTTTAAAGAGCATCTGAA TAAGAACTCTTCAAAATGAAAAAAAAAATTGGGAAGAAGGTTGATTTTAA CCCATCCAGCTCAAGATTTCCTGTATAGAAAATAGTATCTTGGGGTCTCA AAGTTAGTCTAGTGCGGTAGGAAATTTAGATGGTTCAACGCCGTAAAGAG GAGGCTTTGTAGAGCTTTGTTAGATTTTCGAAAAGTTTTTACAGAACGTT GTAAACACACACGTTTAAGCGTCATTCTTCAAGAAAGACCAGAGTTCAAA CCGGGACAAAGTATAATATAAAGATGTTTTGAAAAGTTTTGAAAGGGATA GGTAGCCGCTATTGTAAACAGAAAGTTTTATAGAGCATCTGAATAAGAAT TCTTCAAAATGAAAAATAAATTTGGGAAGAAGATTGATTTTAACCAATCC TGCTCCAGATTTCCTGTATAGAAAATAGTATCTTGGGGTCTCAAAGTTAG TCTAGTGGTAGGAAATTGAGATGGTTCAACGCCGTGAAGAGGAGGCTTTG TAGAGCTTTGTTAGATCTTCGAAAACTTTTTACAGAACGTTGTAAACACA CACGTTTTAGCGTATTAATATATAGATTTATATAATCACAATTTTCAGAA AACAACAATAAATAACAATCATAAAAAACAAAAAGTATTCAAAAATATAA AGAAATACAGGCTTTTGAAGATCAAAATTCTGTCAGTTATGACACGATTT ACGTCAAGTTTTGTCGGAAACATAACATATCTTAAAATGTCCACATCTTT TTTTGTGTTTGAGGTATAAGAATTCTATGCTTTTTCTGATGGTATCCAAT CATTTTTGTTTAATTTGACATTCAAAAATCAAGAAATTTTGCCCACAACG TCAGTTTTTTGGCCATAAAATCTTTTGCCAGACCGAATTCGTGGGTCCCC TCTCAAAGAAGTCTCCAAATTCTATCAAGTTTCGAACCAATTACATGCGG TTGTGTTCCAAAAAAGTGCTACATGTCCTAAGGGTTTGCCCCAAATAAAC CCGGTGAATATCTCGCACACAGTAAATGCAGTTGAGTACAAACACATTGT CGCCGGGTAGCTCAGTCGGTAGAGTATTCACCTTACAATCTAAGGTACGT GGGTTCGAACCCCGGTCAACGCCAACTCAGCGGATGAGTAGCTTAGATTG GGTAATCTGATCTAGGCGGTAAGTTACTGGGAGCTGAGAGTAGGTGTGGC GCTCCACCTCAGCATTCGATCTCCCAGATCTAGCGCAAATAGAAAAGGGG ATAGACTCCCTCACTCCCGGCTCCGCTGACAGCCACCAGATGAATATACT TATTACTACTTACTTACAAACACTCAATAGGATGCTAAGAATGCACTGAA TTCAAAGTCAGTAGAGCTAATTTGGGGGCACTAGCAAATATAAAGGAATG TTCGTTTATCTGTATTTCTTTGTATTCTTTTTAGATATTTTCCATTCGTT GTGGACAACGAGGCAACCAATTACCTATCGACAGCAACAAAGTTGTCAGG TATAAGTTCACTGACCAACAATGTACAATTCACAACACGTGAAAGAGATA ACGATCCTAGAGGGGCCTTCAATTGTGCCTTTAAATATGGAAATGATAAG GGCGGTGGTTTCTGGTATGGGGCGTGTGGTGCGTTTTATCCTAATGGCGA GTATCATAATAGCGTGGGTGGAACTTATCAGAAGTATGTTTATTGGAATA ATTACCGTGGTTACTCTGAATCGCTGAAGGAAACCATTATGATGATTCGG AAAAGATCATGCTCGTGAATATGTGTAATCGAATACCTACACAACATTAT AGTAAATTAGACTCCTGTGTCACAGGCCCGCAGAGACCCTTACCCCCACT GGAAAATTTGACAAAGATTTTTGTTGACTTCGATTTCGTTCCCATTCGAA TTTCAATATTTAAAAATTTGCACTCCAAACCTATCCCGATTGGGATATCA ATGAGAGTTTTTGTCCCTACTGAGGAAAGGTTCCACCTTGGCTGTGAGAC AGGGGTGTACTTTAATCATAGCGTGGTATAAAAGAAAGCTGCAGCCGAAA TGATGACGTTATTTATTTCGTCATTATTAGATGTTCTATCTGCATCTCCG TGGTTTGTAAGATCTAAATAGAAGCTTTAAAAAATTATTACCATTGAATC AAAAGTATTTATAGTATTTAAAACAACTACGTTTCAAGTCTGAAACTTTT CTCAGTGCCCTCTTTAATTAGCTTGCTGGGTTACATTTTTATAAAGTTCA AGTAGCTTTTCAGAAATTTTTGGATTAAACAACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002325TCONS_00002325Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002325-proteinTCONS_00002325-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:728906..738539 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.05 0 0 0.06 0.05 0.3 0.56 2.25 1.74 5.49 1.59 5.82 5.49 1.37 1.1 1.06 0.99 10.58 8.14 3.31 3.32 0.62 0.93 1.97 2.05 0.06 0.17 0 0