TCONS_00002325-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002325-protein
Unique NameTCONS_00002325-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002325-protein ID=TCONS_00002325-protein|Name=TCONS_00002325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
FLKEKGRYGSSSLEMALAFKIYLFILFQIKICSCVLFNQFSINKLPSNEP
LNVIEVEKVGQPRCISICHYDKKCLTMIISQPESGKTTCAMYNVSDQFMN
FTTTPSDPSTKHILYNKQKHSCFDWLLAGEQKNGIYPIAGQRQVQCNFEY
KSCNDVLSAGNEESGFYYLYKSPDQPPVYEECIFYKRDCKDWKDAGYTQT
GVYTIRIEGFRLVDVKCEMDFEDGGWIIMQQRFDGSVDFHLFWDDFKEGF
GDLNGEFWLGNEIVHQLTKNGDYEWYFKATAFDGDVGESRYFPFVVDNEA
TNYLSTATKLSGISSLTNNVQFTTRERDNDPRGAFNCAFKYGNDKGGGFW
YGACGAFYPNGEYHNSVGGTYQKYVYWNNYRGYSESLKETIMMIRKRSCS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001229XLOC_001229Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002325TCONS_00002325Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 184..397
e-value: 6.6E-39
score: 145.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 186..395
e-value: 2.7E-42
score: 145.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 180..398
score: 41.218
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 185..395
e-value: 2.47826E-62
score: 200.93
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 181..396
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 323..388
e-value: 1.2E-13
score: 50.5
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 182..322
e-value: 1.8E-40
score: 138.5
coord: 80..181
e-value: 0.035
score: 13.5

Blast
[Close]
BLAST of TCONS_00002325-protein vs. Swiss-Prot (Human)
Match: ANGL6 (Angiopoietin-related protein 6 OS=Homo sapiens GN=ANGPTL6 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.420e-36
Identity = 84/229 (36.68%), Postives = 123/229 (53.71%), Query Frame = 0 
Query:  175 QPPVYEECIFYKRDCKDWKDAGYTQTGVYTIRIEGFRLVDVKCEMDFEDGGWIIMQQRFDGSVDFHLFWDDFKEGFGDLNGEFWLGNEIVHQLTKNGDYEWYFKATAFDGDVGESRYFPFVVDNEATNYLSTATKLSGIS----SLTNNVQFTTRERDNDPRGAFNCAFKYGNDKGGGFWYGACGAFYPNGEYHNSVGG----TYQKYVYWNNYRGYSESLKETIMMIR 395
             P V  + +   +DC + + AG+ Q+GVY +R+ G  +V V CE   E GGW ++Q+R DGSV+F   W  +K GFG  +GE+WLG E V+QLT  GD+E       + G    + Y  F ++ E+ +Y     +  G +    S  N+  F+T +RD D     NCA      + GG+WY AC     NG +H+  GG     YQ  VYW  +RG + SL++  M+IR
Sbjct:  246 HPAVPTKPVGPWQDCAEARQAGHEQSGVYELRV-GRHVVSVWCEQQLEGGGWTVIQRRQDGSVNFFTTWQHYKAGFGRPDGEYWLGLEPVYQLTSRGDHELLVLLEDWGGRGARAHYDGFSLEPESDHYRLRLGQYHGDAGDSLSWHNDKPFSTVDRDRDSYSG-NCALY----QRGGWWYHACAHSNLNGVWHH--GGHYRSRYQDGVYWAEFRGGAYSLRKAAMLIR 466
The following BLAST results are available for this feature:
BLAST of TCONS_00002325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGL64.420e-3636.68Angiopoietin-related protein 6 OS=Homo sapiens GN=... [more]
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