XLOC_040891 (gene) - C. hemisphaerica

Overview
NameXLOC_040891
Unique NameXLOC_040891
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_433:516819..523470-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040891 ID=XLOC_040891|Name=XLOC_040891|organism=Clytia hemisphaerica|type=gene|length=6652bp|location=Sequence derived from alignment at scaffold_433:516819..523470- (Clytia hemisphaerica)
ATTATAATAACATTACCCCCGTCTTTTGCCAGTTTGGTATAATATGTTAT GAATTGCGTGATTTTGCTGTGCGACGATAGCTCAAGTGGTAAGGCGTCCG GTTTGGAGACCAAGGTTGCTTGCATTTGGTGGTTCGAACCGAGGTGTGGG AGTATAGTTTCAGTATTAGCAAAATAGCATCAAATAGTCAAATTCAGAAA AAACTAAGTCCAGAAATCAGAAAAAACAGAGTTAGAGATAGGAAATAGAG AAAAAGAGGAGAAGGGCGGAATTGGTGATNAACTGTTAGCGTGCAAGCCA AGTTGAAAGTTCTGAGAGCCAAGAGAAAAACTGGAAAAGGAAATTGAAGT ACGAGTGGATTTAACATGCTCCCATCAGTTTTAGTCACAGGTTGCAACAA AGGAATTGGCTTGGAATTCATAAAACAGCTGGTGGGTAAAACCTCCCACC TATTTGCAACATGTAGAACCCCCTCAAATGTAAGCTTTTTCACATTTTTG TTTGACCTTGACACTTTTATTTGACTTGTCAGATTTTAGATGTATAACAA TAGGGTGTCTCCACAAGGGTCTATGGGCATCAGCAGAAACAACTATATTT GTTTGTGTTCGATTGCATTTGAATAACGTTTTATTGGTTCATAGACCTTT TCGCCGACGACCCACGCCACGGCATGGCCCGTCGCCCGAACATGTTCGGT CCTGTTCGGACCATGCTCGGGCCACAAAAAATTATTATTGAATCGGCCCA AACATTTTGTTCGGACCATGTCCATAGGAATAGTAGAATAGTAGAATTTA ATTTTATTTACCTTTCCTGGTTTATCATCATCCATTGTTAAATATTTTCA TTAGATTATTAGACAAATTCAAAGTTCCAAATACCAGTTTGATTCACAAA GCTGTATAACAGTACAAAAAAAAATTCCAGAAAAATTCTGCTTCGAATAG GAGAAGACCACGAGAAAAGGGAACGGGATAAAGAATAAAAAGAACACCAT ATATTATGTAAGATTCAAATCATTCTTTTTAATAATTTTCCTAACTTAAT TGGAAAAAAGATGATTAACTTTTATATTTGAACAATATATATTTGAATAA AGATGAAGATTTTTAAATTTGTTTGCTAAAATAATGAATTTAAAATATAA ATATTGGGTCCTGAAATTACATGCGGCAAGTTTTCGAAAATCTGGCCCGA ACATGGTCCGAAACTGCGCCATTTAAAAAAAGTATTAATCAAGAGGCCCG AACATGTTCGGGCCATGCCGTGGGTCGTTTTCGCCTCCCTTCCATCCGCC ATATTCCAGACATAATTAATCAAACACAGTTCGATTATAATCGAACAATC GAACTTTGTCGAACTTAATCGAACGACAAAAGTTGCTAAAATTGTGAGTA TTCGATTAAGTTCGACAAAACATATTAAGTTTGACAAAGTTTGACAACGA GAAATGTTTGAAAAATTTGACAAAAAACTCCGTTCGATAAAGTTCAACAA CAAGGAAAGGTTCGACAAATTCGACAAAAAACTCCGTTCGAAAAAGTTCG ACAACACAAAATGACCAAGTTCTTCAAAGTGTTGTCAAAAGCTGGCAAAA ATTACGAAAAATGACCTCCTTTGGGTACCAGCCCCGGTGGGACCAATCTA GGCCTCTACAGCCCCCCACAGCCCTTCGGACCGCTTTGGATACCCTCTGC CTTGCTTTCCCTCAAAGCCAGCACCATCCATCAGTCATCCGAAGCCCTTA AAAGGCTTGGAAAGGCGGAAAGGCTTGAAATTGGTCAAAATTGGAAAAAA AATGACCTCCTTTGGGTACCACTGCGGACGGCCCCTGGGGGTCCTGGCCG GTGTGCCGGGGGGTCTGATCGGTGCTCAGTGGTCAGGGGGGTGTAAGCGA ACACGCCTGCCCCGTTGGGGGTCCTTCAAAATTCCTCAAAGTGCCATCAA AAGCCGGCAAAAGTTGTCAATAATGACCTCCTCAATTGAGGCTGCTACAC CCCTTTCTCACCAGGAAAAATCGATGGTGAGACCAATTGAGGCCTCTACA GCCCTCCATAGCCCCTGTATTTTTGCATACATCAAGATAACGGATGGAAA TGCGAAAAGGTCTATTGATTTCAAATAGCTTTACTTTCAATCGATCTTCT ATTATGTTGGATTAGTATGATTACGATTATGTTTGATAAGTTTGATTGCA ATTTAATTGGCCCACTCCTTTCTTTATACATAGAGCTTTAGCGTGGGTGG CCATGGGAAAATTAAATAAGAGTGACTGCATAAGTACCTTACAAGAAAGG CCATATATATTTTAGAAGGGCACTTTTTCCAGTGTTTTTCCATTAAAAAG GCTGTTTTTACCAATATTTTAGTAATTTCAAGAGGGGCAAGGTACGATAA CTGGACCCTTATAGGGCATGAAAAATGACCTGCATCAGTAAATAAATCAA ATGAATGTAATCAAACATAATCGAATACAATCAAACGTAACTGAAGCAAT TGAATGGCAAATCCTGTGTAATATTCAATTACGACATTCGACAATTCAAT CACAATTATTCAACTGCATTTGATTGTGTTCAATTGATTAGGTATTCGAT TAATTTGATTGACACCGTCTGGCCATGGCAACAACAATGATGATAGCGAC TTCAGAATTCACACAGCTTTTGTTGATGCCAAACCAAATGTTTCATTTTT TTGTGAATTTTGAACCCTTCTAACTTTTCTCTACCGTCAACTGCTCTAAC TTGGGACGATTGGTCGAAACATACCGGGTGTCTGTGAAAATACTTCCCCC TGTTTGATTCAATATTGCGAAAAAGTGAAAAAATATATTAGCTTTATTTT TTCTAAATCGTTTAGAGGAGGGTTTAACTTAAATTTTGGTATATCAAACT TTAACATTGCTTCATTAGATCAAAAGTTATGACAAAAAGAGTAAAAAAAT TGTTGTCAAAAAGAGCACAAAAAGACGAAAAAACAAGGTATCAATTTACT TTTGATCTTCNGATAACTTTCACTGATAGTGCGCCGTTTTTAATTTTTTT TATTCAAAATGACCGGATGCCGATTGAAGAAATAGAGAAAAAAGTTGCAA TCATTGATGAACAATTATGTATGTCTCTGGAAATGGTTGAAAACATAGTT GCAGGTTGAAACTTTGTATGTTTATCAGAAAGGAATTTAATAAGAACTTT AACACTATTACATTATTAAAATTTATTGTTCAAGGAGCTGTCCAAATTAG CAGAAGAGAATTCTAATCTACACATTTTGCATGTTGGTAAGAATATTGTA AGTTTTCTCACTATATTTATAAAATAATGTAGAATTAAAAAACTCTGGAG AAGATTTTCAACCAAAATTATAGAAAACAGTGGTGTCTTATCATTTCATG GACAAGTTCTATTGAGTTTATTAAACTTAAAAGTACCTAGAAGGGAATCT TTTGGATGGAAAACTAAGCAACTAATGTCACAGGTTGGTTACCCAATTGT AGTTTTCACTCGAGAACAATGAAAAGAAACAATAGATTCAAAAGTTTACC ACGTGGTAGCAAAATTTGAAGAAGGGAATCTTTTGGATGGAAAACTAAGC AACTAATGTTACAGGTTGGTTACCCAATTGTGGTTTTCACTCGAGAACAA TGAAAAGAACCAATAGATTCGAAAGTGTTTACCACATGGTAGCAAAATAG AGTGCACTCTTTAAGCAAATGGACTACGTAAACATTTTCGAGCTTATCTA CAATAGTGTGGTGGTTCCCCTTAATTTGAATAGCATTGCCATCAAGGCAG AAGATCCAATCTCAAAATAAGTACATGAGAAAACTTCTTTTACTTTGCTA GCTTGAAATTTGAGTTTGTCCCCCTTTTTTCTCTTGATCCTACCCAACTA AAAGAAAAAGGCCAGAATCTCAGAATTTTAAGTTAGGAAAGCAAAAAAAG TCTCAGTTATCTCAACACTAATTTTGAGATTGGATCCTCTGCCTCGATAG CAGTGATAGATGGATCCATTTTGATTTCATAGAAGTAACAAAGGATGATG ACATCTTTGCAGCTAAAGAACAAGTATCACATTTTGTGGAAGATGGCGGT TTACATTGTCTCATTAACAATGCTGGTGTTGTGAATTATGAACATGCAAA GATGGAAAATTTGACATCAGAAAGTCTTTTAAATACTTACCATATAAACG CTGTTGGTCCTGCCATGATGGTTAAGGTAGACAATTTCTCTCATGCCTTG TCAGGGAGTCAAGAAAGTCTGGATAATAATTTCTTTTTGTCTTCATTTTA CAGTTCCTTGGTTGATTCTAGTTTTAACAAAACCCTGATTATAGCTTTCT ATTTTCAGGCATTCTTACCACTTTTAAGACAAGCTGCAACAAATTCTTCT TCAACTGCAATGCCTTGTGGCGTATTGAATATTAGCTCCAGAACTGGATC GATTGAAGATAATGGTATGGGCAAGCTGTATGGCTCAAGGCTATCCAAAG TAAGCGCGATATTCTAAATAGAACATTTAGCATAATTTTAATAATATTTA CGACTTCAGGTGAGCTTTCACGATGCTCAATGGAAACTGGTAGTTACCAT GCCCTTGTGCTTTTTTTCAGACGTGCCGATTTTTGAATAAACGTATCGTC TCATTTATATTCTTTTATATCATTTATTTTCCAGGGAGAAAGAAGATAAC GAACTAGCTAACTAGCTATATTTTGTTTAAGATTTGTTCTTGTTTTCTAT AAAAAAAATTTATTTTGTTTTGAAAAGAATTCGAATGTCANTTCAACACT AATTTTGAGATTGGATCCTCTGCCTCGATAGCAGCGATAGATGGATCCAT TTTGATTTCATAGAAGTAACAAAGGATGATGACATCTTTGCAGCTGCTGA ACAAGTATCACATTTTGTGGAAGATGGCGGTTTACATTGTCTCATTAACA ATGCTGGTGTTGTGAATTATGAACATGCAAAGATGGAAAATTTGACATCA GAAAGTCTTTTAAATACTTACCATATAAACGCTGTTGGTCCTGCCATGAT GGTTAAGGTAGACAATTTCTCTCATGCCTTGTCAGGGAGTCAAGAAAGTC TGGATAATAATTTCTTTTTGTCTTCATTTTACAGTTCCTTGGTTGATTCT AGTTTTAACAAAACCCTGATTATAGCTTTCTATTTTCAGGCATTCTTACC ACTTTTAAGACAAGCTGCAACAAATTCTTCTTCAACTGCAATGCCTTGTG GCGTATTGAATATTAGCTCCAGAACTGGATCGATTGAAGATAATGGTATG GGCAAGCTGTATGGCTCAAGGCTATCCAAAGTAAGCGCGATATTCTAAAT AGAACATTTAGCATAATTTTAATAATATTTACGACTTCAGGTGAGCTTTC ACGATGCTCAATGGAAACTGGTAGTTACCATGCCCTTGTGCTTTTTTTCA GACGTGCCGATTTTTGAATAAACGTATCGTCTCATTTATATTCTTTTATA TCATTTATTTTCCAGGGAGAAAGAAGATAACGAACTAGCTAACTAGCTAT ATTTTGTTTAAGATTTGTTCTTGTTTTCTATAAAAAAAATTTATTTTGTT TTGAAAAGAATTCGAATGTCATTAGTAATCAAATAAGGTCGTCAATTACA TTTGAAAATATATAAAAGAAAAGAGAAAAAAAAGGGGTAAAAAGGGCAGA AATTAAAATTGCTTAATGTAGATGGGTATTTAATTTCAAAACAAAGGCCA AACGAAGTCTACAGGCTCTATCAACAAAAACATTCCGAAAACGAAAGAGT AACACATGTACAGACAGACAGACAGACAAACAAACAAACAAACAAAGTGA CATACAGACTACGGCTATTAATTTAACGTAGTATATAAATACAGTAAAAC ACTTTCAATCATATTCATTGTTCTTTGACCTATCTTTTTCATTTCAGGTA GCTTTAAACATGCTCACAAAAAACCTAAGCATAGAGTTGAAAGCAGACAA TCTCATAGCTGTGGCTTTGAATCCTGGATGGGTCAAGACAGAAAATGGTG GGGAGAATGCGCTGATAACAGCGGAACAAAGTGTACATGGCATGCTCAGT GTTTATAAGGGCTTAACAATGAAAGATTCAGGTGCTTTCCTGAGCTATGA TGGTTCAACAATACCTTGGTGATGCAACAAAATTTTTTTATTATTTTTCA ATGTACATTTTTAAGTAATGTTTTTCTACACATATGCACTACACTATCTG ATGATAAAATAGGACGTTCTCAAATGATTGGATGACATAAATAGAGTACT GCAGGCTATCCTCGAATGCCCCCATATATACTACATCCCCCTATATAATA TACACCTACCAAACCCGCACTATTTAAATTAGCGGTCTGTCAACCTTTTT TTAACCATTTTCCAGCCATTTTCCATTATCAGATATGATGTTTTACAGAT TTGGTAATCCTGAGGAAACTGGATTACACACTATTTTGAAAATAGCGCAA CTACTCTTAAGTGCCAAATAAATGGCCCCCCCCGTTTAATAATTTTTAAA AATATTTTTAGCTGTCAAATAGAAGGCCCTTATTTTGCTCTAAATAGCCT GATTTTAGCCTATATTTACCTTATTTTGGGGTTTTCAGAAGTACAATTTC CA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065230TCONS_00065230Clytia hemisphaericatranscript
TCONS_00065229TCONS_00065229Clytia hemisphaericatranscript
TCONS_00065228TCONS_00065228Clytia hemisphaericatranscript
TCONS_00065227TCONS_00065227Clytia hemisphaericatranscript
TCONS_00065226TCONS_00065226Clytia hemisphaericatranscript
TCONS_00065225TCONS_00065225Clytia hemisphaericatranscript
TCONS_00065224TCONS_00065224Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065229-proteinTCONS_00065229-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:516819..523470 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.61 30.54 19.55 16.67 14.35 9.57 10.83 10.51 11.26 12.06 11.56 11.3 13.03 10.95 14.15 15.99 11.54 11.85 8.19 7.64 10.49 9.62 20.26 16.86 8.34 8.66 3.95 3.43 10.26 13.14