XLOC_040260 (gene) - C. hemisphaerica

Overview
NameXLOC_040260
Unique NameXLOC_040260
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_41:426183..433047-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040260 ID=XLOC_040260|Name=XLOC_040260|organism=Clytia hemisphaerica|type=gene|length=6865bp|location=Sequence derived from alignment at scaffold_41:426183..433047- (Clytia hemisphaerica)
AGGATATATTCTTGAAATACAAGATATGGTCAACAGCCGCCCAAATTTCC AATTTTTGGTATAATAAAATCAGGTTTCATTATCATTCTCATTTACCAAG GTACCGGTTGAAGCAAGGATCTGTTTCTTTTAAGCGAATTTTCGGGAGGT GGCATCCAAAATCAGATTCTTCGTGTATTGCGTTTGGGGGCATTTGCAAG CTGATCCAACCCAAAATTTTACCATGTAAAGTATTTTTTGAATTAGCCTG TATGGTACTATTTGGTTTCAAAAGTCTTTTTGTATGGAAAAACCATATTA AGTCTAAAATAAAATAATTTTTGCAAGCATTTAATAAATACAAACACAGC CTTAGTCTAATTAAATAATGTACACGCAAACAACACAAATCCTGTCAATT AGAATTAAAGACCAATATTTTACAAGTTATGTGTTAGTTTTAAATCACGA AACTGATGTATTTGAAGAGGTTTGATGTAATTGTTTGGAGATTTGCTTCA ATGGTAGACGATCGCTAAAAAAGGGAATAGTTTAGGAGGCGGGATAAATT TGTAAACGGGTGGCTAGCCCGGGGTGAAGTAAGCTTGGCGGAGGTATTTA CAGCGTTATTGGTCCATTTGTTCCAAACTCTACTGCCACTATTTTCCGTA AACCGCCGTGTTGGCTGTGAACTTATATTTCTCTGCGTTTACTATGTCCT TCTTCAAGAGGCCCCAGTGGTTTGCGTTATTGTCTGGTTTTTATTTTTCT GGCATTATGGCGTGATCAAGATCTTGGACTGATGTGTGATAGGGCAAAAA TTTGAGAGGTGATGCGTAATTTTGGCTATTTGAACCTTTTTTGTGTGATG AATAAATTTTGACAATTTTCTTGATCACGATAAGGCATGATGAGGGGTGC AACTTGGTGGGCTCCTTCAAGGCTTTTATCTTAAAGAGACAATCACACAG ATATAGTTTAATGTTGTGGAAATTTGATGATAATGTGGAAGTTTTAATCT GAAAATCTTGTAGAAATAGCGGAAACTTTTGGTGAGGAAGATTTTTTTTT CATCTTCTTTCGTAGAACGCAGTTCTGAGATTAATATAATACAGTTTTGT CTTCTAAGGGATTTGTAGCAAGCGAGTGCGAATTTTCGACGGGATTTCTT TTTCACAAACATACGGTGTCTGGTGATGAATATTAGTTTGTCAAACATGG CTTCCATTTTCCTTTTGAATATTTGTCGTTCCAATTAAAAGTATTTCTTT TCTTTTCAAAATACCTTCACTCCGAAATATAATTTTTGATGCGAATGTAA ATAGAGAGCTTTCTGAACCTCAAGTTACCCTACTCGTCTCACGGAACGGC TTTCTTATGATGGTCGAGTTCACAAGCATTTTAAAACGTATATATCTGTT GGGTTGCCTAGAAAAAGAGTGAGTTGCCTTTGTTAAAAATGCTTGCCTTC ATTAGCAGTAAGTTTGGCAAAGGAGGCATCAACTCGATCTCACATTTAAT GTACAGTCAATTGTTTCGTCAATTCACTGGCTACACTTTAAATTTTTACG TTATTTTACTTTAAGAACAAAGGGACAAAAAGCATATAAGAACATTACAG ACTTCAATTTCTTAGAAAATTAAACAAAAATACTCACAAAAATACAAAGA CTTTAAAGTTATAAAATATCTTGTAAAAAAACGTGTAGCCTTTTTGTCCA CCTTTTTCTCCGTTAGGTTTGATACTGGGAATATCTTCTCAGTCAATTAT TGTTTGGCAACGTTTTATTGTTTGGCAACGTTCTTAGCAAACTCTGGTAT GACAAGTTTATTATTCAGTTGGAATGATTTAGGGTAATTTTCAACGAAGA GAAGAGGTTAAAACTAGCTTTTTCCTTCACTATTTAATAGATTGTGAAGA ATTCGAGCTTTGAATTAATCTAATGTTCTGGCTCTCTTGGATGTATCACC CTGGAGGATACTGAGCTATCTTAGCAGAACGGTAGGATGTACCTCAGAGG TTTAAACAACGAACCCCTTTGTTTTGTTGTTTCGAAAGAGATGATTTTTG GGATGAAAAGGTAGTCTGGGACACTGTACACGTTTGTACCATTTTTGACC TGGATACTTCTTGTCTTCTTGGATCGAGCACTACCTGTATGTACCTCTGA GGTTTAAAAAACAAACCCTTTTGTTTTTTTGTTTTTTCGAAAGAGATGAT TTTTGGGATGAAAAGGTAGTCTGGGACACTGTACACGTTTGTACTATTTT TGACCTGGATACTTCTTGTCTTCTTGAATCGAGCACCACCTGTGTGTACT TCTGAGGTTTAAAAAANTGACCTGGATACTTCTTGTCTTCTTGAATCGAG CACTACCTGTATGTACCTCTGAGGTTTAAAAAACAAACCCTTTTGTGTTG TTGAACTTTCGAAAGAGCTGACTTTGGGAAATGAAAAGGTAGCCTGGAAT CCTCTGTACCATTTTTTGAATTGAAAACTACTTTTTGGACACACTTTCTT TACTTATTCTATAATATTCAGCTCATTAGAAATATGTGGTCATGGAAGAA AAGCATGTTTACTTAAGACGAAGATTGAGTAGGCTCGATTTAATACGATT TATATCCTAATCTAATTCAGTCTGCTAGTCCCCTCAATCCTCATATCACA GACTATAAGTAAAGGATTTTGATGTAAGACTGTCTCATAAGAAAGTTTTA AAAACGTTCTCTATAGTGAATGATGTGTTTGTTTGTTTATTTTTTCAATT TGTTTAATATATTTCCTTAAAGCTTACCATTGATTGAGATAGGAAGCGTT CTTGAAAAATTGGAGGTCAAACGGTTTCTATCGGTACCATTATGATTATG CATGACTTGAGCTTTTTCGTGTCTTCTTTTTACTTCTTTTCGGCGTGATT CTGAATTTCATTGCGAGATAGCGTTCCTCAGATTTCGGTGTGATGCGTGA TGGAGCAGACATTTGATGCGTGGTGCCTGACTTTAGCTTTACTTTGCTAA TTTTTGCGTGAACTTTGCAATTTTCGGGGTAGTGATTAGACCAACAAAAT TTGACGTGATGCGTGATGCGTAATGGAGCAGACATTTGATGCGTGGTACG TGACTTTAGCTTTACTTCAATAATTTTTGCGTGATCTTTGCTATTGTCGG GGTTGTGATTAGATCAACAAAATTTGGCGTGATGGAGTGATGAGGGGAAC CGCAGGGCATCTTTCAACCTATGTATATCCTATTTATGTTGTGTTAAAGG TTTTATTGTTACATAAGTGTTCCCGTATCATATCAGGACAGTGTTTGCCT ATTGTTATATTATGCTGATTATAAGCAAAAAAGATTTTCCTCTTCCTGAC CAATCTTGCTCCACATCCGTGTCAATCTAATGTGAAAAAGGTTGTGAATT AAAATTGATGAGTAAGCAAGCTATATCCCTCTTATTTAAAAACAAAATCT TTAAGCTGCAAAAAAAGTTATCTACAACTTTTTACAGATTAATTATTGTT GTTTCTTGCAGTTGCTGAATTCGGAAAATTTCGTATAGCATTTTGGTGAT ATGTAGCTCTGTGTATGTTTTCTCATAGCCACGAACTCTTTCCTCTGAAA AAAATTAGAAAAAAACCTTCCTAATTTCCTTAATATCTTTGTGTCTTAAA GAAATCCGGCTTTAAATTTCCCATATTCACTGACTGAATCAACAAAGAGA TTATTGGGCGGAGAATGTAAAGTCATTTGAAGATCATTACCGGATCAAAA GTAAAAACAACCTTTGTAAATTCATTTGTTGTACACTATATGAGAGTGAC TTGGCTTTAGATGACACAGGTTAAAATTATCGGAGTTTTTTATTTTTCTA AATATGCGTGGGATTGTTTCGAATAGAATTCCCTCGAGGAATTCCTAAGA GATTTCTATTGTAATACCCCCGAAACAATCCCAGAATGTATCGCTTTTTT AGAAAAATAAAAAACTCCTATTAGATCTATTCCAAGCCATCATGATTCGT TGCTTTTCTGGTTTCCTTGGGCTGACCGTTTGTACCGTCAACTGCTCTAA CTTGGGACTATCTGACAAAACATGGGACGGCAATTCGGCCACCATTTCAC CGAGCCTCCAAAGTCATTTGATTTGAGTTAAGGAACGGCGTATTAAAAAA TACACGATTTCTCTTTCGATTTTATTACAGTAAGTAAAACACAGACCAGA TATGCAACAGTCCCATGTTTCGACCGATCGTCCCAAGTTAGAGCAGTTGA CGGTACGATTTGTGTTTGAAAAAAGTGAAGTAGTATGAAGGCTTATGTGA ATTTAATGGTCGGATTTGGTTGAAGATTTGAATGTTTCATGGCCATGACG GGAGCTTGCTGGAGCAGTTTACCAATAAAACTCTCCAAATTTGCCTAATT TGATTTACCTAAAGAAGGGGAATTGCAAATGTTTATACTTTTTCTCGTGT AAATTTAGGTCAATATTTTACCTCTCAGAATAACTGATTCTACAAAACTT ACATAAAGAGCCCTCACATTTTTTTGTCATTCTTCGAACTCTCGTGTGAA GGATTAGTGACGAAAGGGTGCTAAGCATCGCTCGATATTTTTTCCATGGT GAAAAGTGGAGGAAGGCAAGAAAGCTTTCTTTCAACTAGACACTATATTT TTTGAGGAGGCAGTAATTTTTGTGAAGACTCTATTTTTTTTCTTATTTTT CAGCATAAAACTGCTCTTAATTCTAATTCGTTTTTATCAAAAATGTTTTT CAGTTCTGATATCTCTTTCAGACTGTATCTCCCATATTATGAAGATTTGT TGATTTGTGCGGAACTTTACTCTCCATTAGTTAACACTGCCATCCCATTT AACATAGTCATACGAAACTTTTCTTTCAAAATTTATTTTCACAGTTCTCA AATTATATCTATAAAAGTTTACGAATGAGGACTTTCAAGACACAAATCTC AGGATTTATATTCTTCATTTTTCTAGTAGATGTAACACTTTTTTCGAGTA ATAGTAAACTATTTGGTGTAAGTGTAGTCCAAACTTTTTGAACCATTTAC ATACTCTTTCATCCAAAGACCTTAAGAAACAATATGCATTTTGAGAGATG AGAAATAGTTAATTGGTTTTATTGGGTCCAATAGAAAATGTAAGGTTTTA AATAAATAATAGGATTTCGAAATTCCATTTTTTCTTGACGAACATAATTT TTATACGTGGGAGCAGGGAGGTCACTGTATTTCGAAAAATTACAAAATAG TTTTTCCATTAGGGCTATTTGCTTGAATCTTTTATGAAAAAATAAGTCTA GAATCACATTACAATTTTCTTTTCTATAATTTTCATGTTAGCTTCCTTCA CAGGGTAGCCGCGGTGCTTTTTGTATTTTTTGACAATCGACATACATGAT TTATTTATGTGTTTTAAAAGTCTGAAATTTTTTATTTTTTAAAACTGCCT CTTCCCTTTTCCGTCAATACTATGCTTTTGAGGAGGATATTGAGTTCGGT CATGTAATTACTTTGTAAGTGACTATTCCTTGGCATCTATTATTGAATTT ATTTAATTTCAGCTATACAGAGGTCATAGTCGGGGAAACGTCCGTTCGGT CCCGTCCGGTAATTGTAATTTTATCTTCAGAATAACTAGAAACTAGATCT TATTCATGCAACATTTATTTTATTTTATTTACAGCAATGACCTTTCAAAA CAATTCATCACTACTGAAGAAGTACCAACCATTATCAGCTTCTGGTGGTA CTCAACAATCTCTTGCAATGGAAGTGACCTATCTACCCTCTGAAATCCTC AACATCATCGCCCTTGTTATTCCATGTCTTTTAGGAACATTTGGTAATCT ACTTGTCACCTATGTATTCATGTGGAAGAAACGTAGAATGCGGAAACCGT TCGAATCTTTACTATCAATACTAGCTGTAGTTGACATGTTTGCATCAATG GTTGTTCCTGTATTATTCATCTATGGTGCTATTACGAAATACCGACGTTG GCATTTCGGATATATTGGATGTAAAATGATTTCAAGTTTTTTCCCAATCA GCGTGACTTTATCTCAAGGGATACTCGTTTTAATTTCATACGAACGTTAC AAATCGATTAAAGCTCCATTCGAGCGCTCGCTGCGACAAAGTTTCATTCT AGTTTGGATGCTCATCACTTTTGTCATAGGTTTGATATTGGTATCTCCTT ATGTATACGTTCTGGAGTTGGTAACTTCTGACCAGTACGGTATCAACACT TGTATTCCGTCGGAGAAAGAAACAAGCATAATGTTGTTGTATAGCATTGG GAATGTCATCAGAGACTTTGGAGCTACTTTTGTTATGATAACATTGGGCC GAATGTCGAATAATGTTTTAAAGCGAAGCAATACGCAATTGAATGCGGAC ATGACACAATTTACGGACGGCCCTAGATGTCGTAACATGGAAAAAGCTCG TAAAATGTTGATAGTGGTTGTCATAGTATTTTCCACGTGTGTCATCCCAC TGGATGTATTTCAGTTTATTGTTTACATTTTGTATCATGTTGGAGTGACA TTCAGTAAACGTGCTTACGAGACTGTTCTAACGTTCAATTCAGTGTTGAG TGTTCTACAAATTATGAACAGTGCGACTAATGTTGTTATTTATTCGAGGA TGCACAAAGACTTTACGCGCTCCTTGTTTTCTAATGCTCGTAAAACGCTT CGAAATTTCTCGCAAATTGTTCGAGAGTTTCGTATGAGTGACCAGAAGAA AGAACAATCAACGGAACTTTTAGATTTATCTTTGTAAACGACTTGGAAAG GGCTCCAAAAATATATTTGAAATCTTAGAGGTTTTATTTTGAAAGATGAA AAAAGTGAAGCTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064217TCONS_00064217Clytia hemisphaericatranscript
TCONS_00064216TCONS_00064216Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064217-proteinTCONS_00064217-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:426183..433047 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.93 1.21 0.72 0.63 0.33 0.53 0.36 0.26 0.3 0.11 0.39 0.28 1.11 0.55 0.06 0.19 0.56 0.87 2.41 2.48 0.92 0.55 1.74 1.66 3.15 3.49 0.34 0.16 0.51 0.2