XLOC_032687 (gene) - C. hemisphaerica

Overview
NameXLOC_032687
Unique NameXLOC_032687
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:552019..561856-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032687 ID=XLOC_032687|Name=XLOC_032687|organism=Clytia hemisphaerica|type=gene|length=9838bp|location=Sequence derived from alignment at scaffold_202:552019..561856- (Clytia hemisphaerica)
CCATAATTAAAGCTCCGTTCCCCTTTCAGCACCTGCACTTTTCCAGTCAC TTCAACAATTTGAAAAAACTTTAATTCTTTGAATGATGAAAGCAAAAAAA AGAAAAAAAGTTATGACCAAAACTACTGGATGGAGGTCGACTGCCTGACT GCTGACTGCTGATCTTTGAATCTTTCTCTTTGATGGAAAAAAGAGAGTAA GGTCCTATACTAGAAAATTATTTTAAATTTGTTTCTCTTAAAATTGACCT TATGGAGATAATAGCTCGGAAACTGCAGTAATAAAAACGCAACAATTCTC CATAGTGTGAAAGAGGTATTCGAGTTTGAAGAACCGAGCGTGATCGAAGC GGAAAGAGTTTCAGCAGCATTTTTTTCACATTGTTTCCTGCACCACGAGC CTGACAGCCTGACAACAACACTTCCAGTCTTTATATCTCAGTTAGCTGCA TCACTTTGCTGAAAAGACCAAAATGGAAGAATATGCAAGAGAACCTTGGT AAGTCTAGATATAGACATAGACAGTCAGCTCTTGTATCTGAATCTGTTAA ACAAATTTTAACTTTTGTGTTAAGGGGCGACGTCCATATTCAAAGTCGCC ACGCGTAACGGGAAAAGACCGTTAGTGGGTAGGTATATTGGAATGTTGAG AGTTAGCTGTGGCATTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATCATGAAGACCG TTAAGAGGGTGGGTAGGTATGTTTGAAAACTAACGGTCTTTTCCCGTTAC GCGTGGCAAGATTGAATATGGACGTCGCCCCTAAGGTGTGAGTGCTGGTG ATTTTTTTATTTGGATTTTTTTCTGACACTGCTGGACTGTCAATGGGCCA TTCCAGAAAAAAAAAATTACCCCCTAATGGATGACATCAATTTTTGAAAT AAATTTTGGCACGGAATTCCAGGCAAACTTTAAAGAGAAAGTATCGGAGC GGAATTCCATGAATTTTACTTAATTTTGCATTAAAGTATTGGAATTCCAT CATTTTTTTAGGTTACAGTAACGGAATTCCACGGTTTTGATAGGTATTTT GTAAATTTGTTACGGAAATTCCGGACTTTCTTGAAAGCAATTTGCTACGG AAATTCCATGTCGTCCAGTGTCGTCCATTATTGGGGGGTAACGAATAAAA ACTGGAATGGCCCAATATCAATATAAAAGGGGTTGTACCCGCACCAGAAC TCTCACGTTCCTCCACTCTGTTTTGTTTACATAGCAAAGAGGGTGACAAA AGTTAACAACAGAGTATAAAATCGGTTGGTTCGAAACGCAGGAGACAGGA CGCAGGAGACAGGACACAGGACGCAGGTCATANGAACAACATTATATAGA CCTTTTTTCAAAGAGGACGTCCTGTTGAATAATCATGTAGTCCAGTCATA AAAACAATGATAGAGCCATGCATAATTACTGTATCATGCATATTGTAATA ATTATGCATGGTATTATCATTGTTTTTCTGCTGGACTACATAATTATTCA ACATGGTGGCCTCTTTGAAAAAAGGTCTATTCGTCTCACCCCCCCCCCCA CCAGAGACTGGACTCAAGATTATTGCATTTTTTCTATTTTGGTGACATCA TCAGGCCCAAAATAGTGAAAAATTTACCAGTTCAGAGCCTAAATCCGATG GGGTCTTTCAAAGATGCAAACTAAAAAATAAAAACAAACCTTTCGCTGTG ACGCAATGAAGATACCAAAGTGTCAACTAAACTGAGAGATTTGATACACT GAACCAATTGAACCAAATTACAATAATTGCTTCTTAAAACATAATTTTTT ATTACATAAATTCAGAAATTGTTAACGTTTTAAACACGAGCAACGGATTC ATAATAATTAGATAAATCAAAACAAAAATGGTAGACTAGAGCTGTGAGCA GAGCTGCGTAGTTGTATTTTAATGACCAGCCAGGTCTTTCATTTGAGGGC TATGCATGTTAGCCTCCAATGATGCAAGTTACCCAATCTCACGGTAGATG TTTTGTTTTGAGAGTCCTTGCAATAGCTTATTGTTCAACTTGGAGAGGGA AGGCCAGGCCCAATTGATTGTTTGGTTTGTGTCCTAAAAGCTTTGAAAAA TGGGTCGGTTGGTCGGTCGTAGCTAAAATTGGAACCTTTTTTTCATTTTC CCACCAATAACCTCAATTTTTGAAACTCCACAAGCAATCGTGCAATCCTG GAATCCAACCGCGATTGTAAAGAAATAGCCTAAAACCCGGATCCATAAAG GCACGCGCCGCAATCGCAAGATAACTTCTAGTTGGAGATGAAGGCGTTCG CGACGCGTGCTTAAAGGAATACAGCTGTGACTCTCTGCTTTTAGGTGCTA AATATTTGTTTTTAAGTACGGGTTACACTGGGACATTTTCTGTGCGCTAA GTGGGTGTTGTTTATAAAAGAACAGGCATCGAAATAAGGGATAGAAATTT TTTGATAAGCATGATTTTGCATCCTAAAATGGACCAATTTTCAATTTTTA GCTTGTAAGTAATCCAAAAACGCATCGCGAATTGCAAAATGCAATACGCT AATTCGATCCCTGAAAGAATCAAAGCAGTCAGTTAAAAAAGAACCGCAGA GAAAGTAGTTATCATGTGAAAAGGAGGTAAATTCTTTTTAATTTTTCCGA CTCCAAGTGAAACACTTTTTCTCAAAAATTTAGAGTTGGTCGGAGGACAC GAACCAAACTATCAATTGGGCCTGGCCGAATGTTTGTAAACATAGAATTT TTTTCATAGTAGTTATTTGGGGGGTCGTATTTAGGCAGGGCGGTCGGATC TAGGACCATTCACGGCAGCCTCCTACAGGCTAGCTCTAAAGCTCTAAAAC AGCAACTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAA ACTATAAAGTGCACTTACAAACATCAATNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACAAACATCAAT ATGTCAGATCTAACAAAATTAATAACGGCACTGTCATCATTGACAATAAA ACAAAGGATTTTCTGTCAAGAGTCTTGTAAACATTCACGTAAACATTCCA ACAACTTCCATCGAAATGATCTGTCACTGCAAGTCTACCATTTTTAATGC AGTCCGAGGATTGATTTGAGAACGCTTGCAGAACGCTTGTGGCGCGGATG AAAAACTTTAATCTGTCAATCATCTTCTCAAGCGAAGAGACGCGAAGCGA TTCTAGCTTTACGATAGTGCCGCAGATCATCAGTGGATAATATTCAATTA TCATTATCCCTTTATTTTCATTCCTAGAACTTTTGCAAAAAAAAAGAAAA ATAGAAAAGTTGTATTTATTACAAATCTCCTATGTGGCTTTTTTTTGGAA ACTGCAAAAAACTGATTTTTGTCCCGCTTTTGCGGGACTTTATCTTAAGT GCTTGCGTGCAGCATAGGGTACAAAGTCCAAATATGCGTTTCCCGTAATT TTTGTATGAAGAGCTAGGTCTATATTGTCCTAACTCCCTTCGTTATTTTT GGTGAAATTTCTAATTCAATGACCAGGGGTCAGTCCTCTTAAGGGATCCT CGACAAAAAACTTTTAATTTTTTTATCGGCATTGGGCCGATTAGGGGTGG GGGGTCCAACTGCATACCGATAAAAAAACAAGTATTGGGACAAGACGAAA ATCCTTTCCGCCACAATTTCTTTCTGATTTCGTCCACAAACTCCATGAAA GAATGTAATTTCACTTGCTTTCACCGCGCACAAATTTGCAACTTTAAAAA GTACAGTTTTGAATTAGCTTTAATAACAAAACTCTTTTTCCATTGGCCAG CCTGCTGCCTTTACCTTCAAAATGTTGCGACTTCATTGCATCTTTTTAAC TTCTGTTTTGATTAACAATACAATGCGGGTATGAACAAATTCAATGTTAA AATTTAATAGACAAAAATTCAACGATGACAGGTGGGAAGGCGAGATCAAC GCGACGGCGGACATGATTGGAGAAAATTGTGTTTGTGATCGAAGAGATAA TTAAGTTTGTTCAGGTTTGTTTTGAAAATTTTGTCAGATAAGAGCAAGGG GGGAGGGGGTCTGAAGCATCAGCCCAATGCCAAGAAATTTGAAAGTTTTT TGTCGAGGACCCCTATCTCCTTTTCAAACTTGAGATATCACATTTTAAAG TTTTTTGGGAATCCAGTGACGTCATAGGGTCCCTTTATTACCCCCAATAA AAGTCAACGGTCAATTTATGAATTTCAAATTTTTGCTGTGAATGGTGTGG CCCATACTCCAAGAGCGCCAAGAGTGCGAAAAAAAAAAAAACGTCAAAAA ATCTCTAGACATGCACTGCGCGTGCAATCAATTTGAAAACCTAGCAAACA TGCCCTGAACATGTCCGGGGCAGTTTGGGTCATGTTTAGAACTTGAGACT TTTTTAGTATATTTTTTAGGCCTTCAGTTTAAGCTTAATTCCTATATCAG GATTAGATTAGTCTTACCTCTTTTATCTTTCCCTTTACAACAATACAATG CTAACCCGTTGACACAACACATTGACAAGTAATCCCTGTGAGAGAAGTTT ATATCGAAACCTGCAACAAAAACAAAAGTGGTCTCTTCTACTGATTGTTT CCCAAAGCTCCTTCGCAGCTATTTATCAAATTTTGAATAAAAGAAGAACT TTAAATCTTAAATATTTTCATTTTGAAGAATTGGTGCAAAGAAGTGAAAC CATGGAAAAGTTTCATTTTTTAATGGTTCAATCGAAATAGAGGATTTGGA AAACTTTCTATGTTTTTTTTTTTTTGCACAAACCCCTGTAACTATGGGCG AGCACCCTGTTGCTAAGATGTTGGCTTGAAATCGAAAGTAAAACCACTGA AAATGAAGGTAAAATCAGCCCTCACTCCAAATCCCGTAATCTTGATATAG GAGTTTGAGCATAGACTGGCCATAAAGCTTCTCATTTTTCAAGTTTTTTT TTTTAATTTTTGACCATTGAATTTGTTGTAGTCTAAAAAATGTATCTAAA TATTATTGATTCATGCTTCAAGTTATCTAAAAGAATATTTTAACTTTCAG TCCTTACCGAATCATCGATGACTGTGGAGGTGCGTTTGCTATGGGTGCCA TTGGAGGTGGTTTGTTCTCATTAGTCAAAGGATGGAGAAATGCTCCTGTT GTGAGTATTCTTTTATACATATCTTTAACATTTCATGAATAATTGACAAA GCTATTTACAACTAAAAGCTCTAATATTATTATTGCATACTATTGTCAGT TTTTTAAACTGACTGAAAGAAACTTTGCTGACACAAATATGAAGAAATCC TTTTGCTCATTCTGCTTTTTCAACATAAGAGATGTGCACTCTTTTCTTTA TGTGACCGTACAAACGATTCAAAGGGAGAGATTCTTGCCAGAAATTTGCC AGCTTTGTGTTTTTTTTGCAGTTCGCATGTTCTTTGTTTGGTGTAGTCAG CAATGTAATAACACTAACTGGCAAATTGCTGGCTGACATAGGGTCGGAAA AGTGTCGGTAAAAAATGTAATCTAATTTTCTTTGCTGCTGGAAAATTGCC AGCTATTTTTCTTTCTTGCCGGCAAATTGCCAGATATTTTCGTTTGTTAC CAGCAAATTGCCATCTATTTTTCTTTGTTACTGGCAGATTGCCGGCAAAA GTCTCCCCTTGGGCCAAACCCTTTTCTAAAAAACAAGTTTACACAAATAT TGCTGGCAAACTGTCTACTGGCTTATTGCGGGCTGTAATTGATAGAATGC CAGACTCAACAGGAGTCTTTCAACAGAATTTTTTGTTATCTTAATAATAT AAGGCTATGTTTCAGAAAAGAGTATTCATATTTTTTGATTGGCTTCCTTT CTTTAGGGCACCAGAATGAAGGGAAGTATCGCAGCAGTGAAGACGCGTGC CCCTGTTCTTGGAGGTTTGTTTCCTTTTGATACAGTGGAGTCTTCTTTAC TCGGACCTCTATAGCAAAAGGTCTCCTTAACTTAACTTGAACGAGTTTTT GGTACCTTCAGTTAATAATGCCTTATAAGCCTCACTCAAACAAATTTGTG TTCACCATCCTCTGTTTTTTCTAAGCTACTACAACTACGATCATGTTCAA AAATAGTGTGACATTTAGTGAACTCAAAAATTGAAAAAAATATAGTATTT CTTGAATACCTCGAGAAATATTTCATATTTTATATTATGATCGGTATTTA CACAAAAGAACATATTTTGATGAAAAAAATGCTAAAATGTGTGGCTCCAG GTCCAAATATGTCCAAATAAGTGTTTTGTCGGCCACCTCAAAGGAGGAAA TGGTTTGTTTGAAAATGACACTTAAACGGTAACTAGAGGTATCATATTAT CTCAAAACAGATAAAAGAGCAAAATTTTGAGACTGGTTGGCCACCAGTGT TGTCAGCCACATAAACGACTCATAGCTTATCTTGAAATATCTTGTTTAAC CCAGTAAGCCACTTAATTTCGCTCCAAAACAATTGGAAAGGTTAATCATT CTACTTATCCTTGGTGAAAAAATAAACTGTTAGCCACGAAAAATACTCAT TTTATTAACATAATTGTCAGCCACTTTGAAAATGTCACAAAACAGGCCTT TATTTTTGAACACGATCCTACATGGTATAAATTTGAGAGTTTCTTCTTGA TACCTCTGAGAAATCATTGTCAGAAGTATAGACGTAAAATAGGGTGACTC TATTTGAAGTGCGTGCTATTTTCAACTTTCCTGTCAACTTCGGGTATGGT TTCTTTTCAAAACTTACTGAAAACCTTTTTGGTTTTTTGCTTAGATCTGT TAACTTTTTATTCCAGGCAATTTTGCTGTATGGGGTGGTATGTTTTCAAC ATTTGATTGTTGTCTTATGTATGTACGTGGTAAAGAGGATCCTTGGAATT CCATTGGTAGTGGTGCACTGACAGGTGCTGTACTCATGGCTAGAGGTATA ATAACTATTTTCATTACTTAGAAATATTGGAAAATGGTATAATCGAAGCT GATCTCTCTTCCTCTAAGCAGCTTTGTAGATTACGCCTGACAGGTTTTAT GTGGTTTCTATAATTATAACCCTTTTCAAAATGCATTTTCTTTTTGTTAC TTCTGTGAGATTGATATAAGTATTGCTTTTATACAATGTCAATAAGCAAA GGTACTGCTTTAACTTTAAAAAAAATAAAAACATTAAATTACCTATAATT ACCTATTACATATAATTTTGGTGTATTCCAGCTGATAGCATTATGTTTAC AAATTGTTTTTTCAATATCTAGCTGGACCTGGTGCAATGGCTCGTTCAGC AGCAGTGGGTGGTATCTTACTTGGTCTCATCGAGGGAGTTGGTATCCTCA TTACCAAAATGACCGCAGAACAGTTCAAACCAGGTTAGTAGATGATACAT TTTATGTTCTATTCAAGATTTAATAATCATTTTTCAAAATTAGTCCATCC TTGTTATACTCTGTTTTTCTCTCTTAAACTTTTTGTCTCCCTATTTTTTT CGTTTGACTACTGTGAATCTAAATGGCTTACTACCTAAACTTGGGACTAA CTATAAGAAGAAATTCATATCTTCAAGGACCTCAATGACCTTGCATTCGA CACACATAGTGCCAAACTAACAGGTGTTATCCATGGTTATATTTTATGCT TTTATATCTAGTTATGCCACAAATGCCAGCAGATCCCGCCCAGCTTCCGC CACCACCCACCAAACCATCGCCCCCGCCTCCAGATGCAACAAGTGGTGGC CAGCCTACTTTTCAATGATGTGTTGAATTAGCATAATGAGAAGGAAATGT CAATGTAAGAATATTATTTGTGTAATTGTACACTTGCTCTNCCACAGTGA GAAGAAAATGTCAATGTAAGAATATTTGTGTAATTGTACACTTGCTCTCT GTATTTTTCTTTCAACGTTACTAGACGAGTGGCACCATATAAGAAACAAA CTATGAGTTACGGCGCCCCTTATCTCCTTGTTGGCAAATATTTTAGGTGA CCCCTAAGCCAATGACTCGTCAATTTTTTTGTTGAAAATCCATTGTGTTT CATGAAAGATATGTTTTACAAACAATCAAGCAAATACAACAGTTCTGAGA CATTTTTTTAGACATTCCATGGTGTAGCTTATGATAAAACAAAATCAAGC TCATAAAAAAATCATAGAATCCAGCCCACGTCTATTTTTCGAGGTTTTAG GGATGTCAAGAAAGGGGATCAGATGTGAAAACTGCAGTGCTTATAATTTT ACTAACCACAGTACCTTGTTATAATTCAAGTTTCTATAATTTAGATCTTA TGTTTTGCAGGCTGGATGTTGTCAAAAAAGGAAAATGATAATCACAATAA GATGCTATTGAATTGCAAATTATGCTTGGTTCAACAAAAGAGTGTTGTCA ATTGGTGGTATGTTATTATTGATGTTCCTTTTGATGATGGTTGGATGAAT TCAGCTTTGTTAATCGCCAAGAGAGGTTTTCTGGCGAAGCAACCATGCAA GAAAAAAGCTTGAATGAAAGTGGATTTTTATGTTAGAGGTGTTTTCAGAG GAAGCAGGTTTTCTGACAGTACTTTTCAAGGATTAAAAGTGCATTTTATT TGTCTGTAAATGTTGCTATGACCACTTGGGTATTTAGTATCAAAAGAGAA CTGATTTTGCAATGTAACTCTAATGTTTGAAAAGGATGAATATTTGTTGC GAGAATAATCCAAACTACTTGAATTTAATTAGACAGTCTGAACAACCGAG ATACCTGAACTTGAGACTACTGTCCAGAAAATCTGCTTGGGGTTGAAACG CTTCAGGTTTCCCAGCCTTCCACCGAAATTGTTTTAGAATTTTTATAAAA CGTAGATATAAATTTTATATATTTTTTGTCAACAAAATGGATAATGAGAA AATTTACTCCCTTAGAAAAATAGAAATCTCTTAATTGTTTTTTTTCGCCA ACTATTTTAGCTGAATATTGAACAAATCCGGTCTAAGTCTAAATCTAATA GAACTTTATTCCAATAATCGCACGATGAGTTATTTTTTCTTCTTTGGCGC GGCTTCAAAGAGAGCAATTAATCGTTAATTGCATCCTGTAGAGAGCAATT AATCGTTAATCACACTCTCCAATGCTGCGCCAATGTTTACAAAATTGATT TTGATGTTTTTTCTTACATTTCTTTGCATCGAACGTTTTAATTGCATTCG AAATTTATTTTGTGAGAAAGAAAATCAATAAACAACAATAAAAGAAAGAC ATAAAAAGAAGAGACAAATATAAAACTCTCAGTGTAATTTCTGTAATTTA CTTTCCTAACTGGGAAAAAGTAGTGAAAGCCATTGTGCGATTAGCTCGTA ATCACATAATAACTCNACTTGAGACTACTGTCCAGAAAATCTGCTTGGGG TTGAAACGCTTCAGGTTTCCCAGCCTTCCACCGAAATTGTTTTAGAATTT TTATAAAACGTAGATATAAATTTTATATATTTTTTGTCAACAAAATGGAT AATGAGAAAATTTACTCCCTTAGAAAAATAGAAATCTCTTAATTGTTTTT TTTCGCCAACTATTTTAGCTGAATATTGAACAAATCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051636TCONS_00051636Clytia hemisphaericatranscript
TCONS_00051635TCONS_00051635Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051635-proteinTCONS_00051635-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:552019..561856 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TIMM17Amitochondrial import inner membrane translocase subunit Tim17-A Homo Sapiens
TIMM17Bmitochondrial import inner membrane translocase subunit Tim17-B isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.26 30.88 22.68 18.87 34.52 25.09 30.44 35.03 39.07 36.43 52.85 48.23 86.15 96.61 57 57.13 53.8 59.36 37.71 34.11 75.24 80.08 65.35 64.57 47.97 53.11 44.13 61.32 44.6 44.37