TCONS_00051635-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051635-protein
Unique NameTCONS_00051635-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051635-protein ID=TCONS_00051635-protein|Name=TCONS_00051635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=176bp
MEEYAREPCPYRIIDDCGGAFAMGAIGGGLFSLVKGWRNAPVGTRMKGSI
AAVKTRAPVLGGNFAVWGGMFSTFDCCLMYVRGKEDPWNSIGSGALTGAV
LMARAGPGAMARSAAVGGILLGLIEGVGILITKMTAEQFKPVMPQMPADP
AQLPPPPTKPSPPPPDATSGGQPTFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032687XLOC_032687Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051635TCONS_00051635Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003397Tim17/Tim22/Tim23/PMP24
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 14..120
e-value: 7.0E-28
score: 96.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..176

Blast
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BLAST of TCONS_00051635-protein vs. Swiss-Prot (Human)
Match: TI17B (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 8.883e-74
Identity = 113/178 (63.48%), Postives = 137/178 (76.97%), Query Frame = 0 
Query:    1 MEEYAREPCPYRIIDDCGGAFAMGAIGGGLFSLVKGWRNAPVGTR--MKGSIAAVKTRAPVLGGNFAVWGGMFSTFDCCLMYVRGKEDPWNSIGSGALTGAVLMARAGPGAMARSAAVGGILLGLIEGVGILITKMTAEQFKPVMPQMPADPAQLPPPPTKPSPPPPDATSGGQPTFQ 176
            MEEYAREPCP+RI+DDCGGAF MG IGGG+F  +KG+RNAPVG R  ++GS  AV+ RAP +GG+FAVWGG+FST DC L+ +RGKEDPWNSI SGALTGAVL AR+GP AM  SA +GGILL LIEGVGIL+T+ TA+QF+   P +  DP+QLPP    P+P        G P++Q
Sbjct:    1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPPFL-EDPSQLPPKDGTPAP--------GYPSYQ 169
The following BLAST results are available for this feature:
BLAST of TCONS_00051635-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TI17B8.883e-7463.48Mitochondrial import inner membrane translocase su... [more]
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