XLOC_031405 (gene) - C. hemisphaerica

Overview
NameXLOC_031405
Unique NameXLOC_031405
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_16:300174..307211-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031405 ID=XLOC_031405|Name=XLOC_031405|organism=Clytia hemisphaerica|type=gene|length=7038bp|location=Sequence derived from alignment at scaffold_16:300174..307211- (Clytia hemisphaerica)
AAAAAACGAAACCGCAGCAGTTATGCTGTGAAAAACATCATAACTCTTTG TTCGACAGATTTTATTATAGAGTTTTTGAGAAATAAATTGGAAGTTGTTA TTTTCTTTGTTCGTAAATATTTGTCTTTTTTACTGGAAAATGGACGGATG GAGGACTTTCCTAGTCTTGGCATTGCTGTATCTTGGAGTATTATCGCGAC CCTATAATGATGGTACGAATTTAATCTTTTTAGTAAATTACTAATAATTT GACATTACTTACCTAAAAAACTTACTGACTTTTGACCCGAAACATCAAAT GTTGCACATCCCATATCGAAATCGATCTGTACTAGTAACTTCTTTTTTTT CTTGCACCAAAAGTCCATGGCTGTACCTTTTGGTCCCGTAGAAAATTTAG TCCTTGCTTTTCACCTTCACTTTCGAAGTTTTATATAGATATAACCCTTT AACTGCCAAATTTCGGCTTTCGTTAGGCTGCCTACCATCCGTATATTTTG TTTAAACTTTTAAAACAAAAACTATTTCATGGGTGCACTAAAATAAAACC TTAGGTTTGCAGTTTTCTTAAAACTTCTCATCCTATGGCCTTCGGACGAA CATTTTTGACGTTAGTCTACTGCAAAAATTAAGATACCTTAAAGGAAGAA ATTTTGGCGGAAAGAAGATTTGGCGGATTTGGCCAGAATCCGCCAAAATT TCTTTTTTCCGCCATCCGCCAAATAAAATTCCCGCCAAATTAAACTTTTT GAACATATGATCTCTTTTAAGGTGTTTTTGCATTTTTTTTGCTGTTTTTA CGCCATTTTAAGGATAAATTTTTCAGCAAACGCCAAATTAAATTCCCGCA AAATTTAGTTTTTTCGTCCATTCGCCAAATTAAATTCCCTCTAAAAAAAC TTTTTCGGCCATCCGCCAAAATTTCTTCCTTTAAGGTAGAATTTAATTCA AAGCAAGATTCGCAATAGTCCGATTCTATCAAATACTTCTGTTCTGAAGT ATTTTATTATTGTTCTTAAGATTGAATTTTATAACCCTAGCGGTTTGTGT ATTTAATTGGTCAAAGACGTGTATATTTTGTAATTTTACAGGGTGAACAA ATTTTTAGTTTCTTATTTTCTTGACCGTGATGAGAGCAAAAAGTTTTGCG GGCCTGACAGTGTGATTTTAGGTGCCATTTCAGGAGTAAGGCTAAAATAA GAAAAACATACAGCACCTGACCCCGAGAGGTGAAATGTTAATCAGACCTG AATGATGTAGATTTGCATTTTAAAAAACATTGAATGTTTTCAACGAAGTT TCGAACTCCCAAAATCTTTTCCCAGGGGTAAGTTTCATTACTTTTGATAG ATAAGGTAATTTTTTTGGCCCTTGAAGTTGATTCCCATTTTCGTTATAAC CCCTAGAATGTAGGTTTGGTTTTATGGTTTTAAATCTAGTACTGTAATAC CTTAAAATAAGAAAATTTGGCGGATTTGGCGGATTTGGCCAGAATCCGCC AAATTAAGTTCCTGCCAAAATTTCTTTTTTTCGCCATCCGCCAAATTAAA TTCCCGCTAAATTAAACTTTTTGAAAATATGATCTTTTTTAAGGTGTTTT TGCATTTTTTTGCTGTTTTTACCAGCTTGATGTGTGCAAAGTTTCATAAT CATAATGCAAGTATTTCGGCTGATATCAGCCGTTAAAGTGCCCTACCCCA CTAGCAAATCTTTTGTACAAAATTGATAGAGACCCCCCATTAAAAGCCTG GTACGAACCTTTTATCACCTATTCAGCCTGAAAACCATCAAAAAATATAA ACTAGAGGTGTATAGGAAGCTAAAAAACCATGGCTCACAAAGTCCCATTC AAGGTGGGATTTTGGCCATTTTTTCCTGGACTATTTCTGATTGGGCTGGG GTCCCAGCAGGTCTGCTGGGACACGTGTCTCATTTCGGGTAGTATCCAAT CAACTTCGATTCAGATTTTTGTTAGGAAAAATTAATTCAAGTTAAAATTT TATCTCTATAAATAATAAAACAGTATGCTCTGAAACAACTTTTTATGAAG TTGAACTATCGTTAGTGTTACAATGCTAAAAAATGAGAAACCTGCATTCT CGGGGTCAGGTGCTGTATATACAAGTTGCTTCAAAACTGACCTTCTGACA AAAACTTGTATCGCGAAGAGACATATCAATCAGACGACACTAAACTGACA ATATTTACGGGACGATTACAAGAGCAATACTTACGAACGGAAATGTACAG AAGGACGCGCAAAACGGTATGTACTTGTACTTCACTACTCATACTTCTTT TAACAACAATAATTAAACGAAAACTTAACCTGGACCATGTTCCCGGGGGG GGGGGGGTCACTCGATCTGAAAACGACCATACGTTCGGCCCAAAATTTGG CTTCTAAAATCGTACCCTTACAGTGCAGTGAATTTCCATAAAAAATCATA CCCTCACAGTGCACTTTTTCAAAATTTCTTGCCCGTAAGGGCGAAAATTT TTGCAATTTTCCAAGAAAATGTGGAATTTTTCCTCCAAAATTGACAAATT TTGTGCCAATTCTACCAAAAAATTGGCCTTTTATCACAATTTCCTACCCT TACAGTGCAGTTCAGTGCAGTTTTGTAATTTCCTACCCTTACAGTGCACT AGCTGAACTATGANTACAAGTTGCTTCAAAACTGACCTTCTGACAAAAAC TTGTGTCGCGAAGAGACATATCAATCAGATGACACTAAACTGACGATATT AACGGGACAATTACAAGAGCAATACTTACGAACGGAAATGTACAGAAGGA CGCGTAAAACGGTATGTACTTCGTACTTCACTACTCATACTTCTTTTAAC AACAATAATTAAACGAAAACCTAACCTGGACCATGTTACAGTATATGATC CCAAATGGACTCGCGTATTATTTAGCTTACGGTTGATATAAATATCTTTT TATCAGAAGTAGCTAATTTTCTTCTTCGTTTTTCTTCACTTTTTTGAGGA AATTTCGAATTATTAGTGGAAAACATGGGCGCATTTAGATATCTTTCCAA CGATACCAAATTTTTATTATATACGAAAACTGGTTAGAAAGTTTTGGTCC AGAATAAAAACACTGCACTGCAAAAAGGTTTTTGACACAGATATATTATC TTACTTCATTTTTTCAGAGCATCAAGAAGTAATATACCGGACGCAATCGG AGCCACGTGATCCACGAAGTTTCAAAAGTTTCATTCAATCAACATCAAGG GGTGCAATCCAGTTAGCGCAGAAAGCCGTCAACTCATTTTTCCCGAATCT CGAAAACAACAAAAACAATGACCTGATTGAAGATCAATTGAACGGACTAC GTATGAACCGAAGATCAGTAAATGAAGGAGATAAAACACAAACAAATATG TATCAAAATTATCTCCCTTATCAAATGGCAGCAACACCCTATGCGCAATA TTATGGAGGTTATCAACAATATCCATATTACGCTTCTAATTATTATCAAT CACAAAATCAACCAGATTTGAGTAAAAGGATAAACATAGCGTTAAAAGAA GCTGCGTCAAAACAAANTTCAACCAGATTTGAGTAAAAGGATAAATATAG CGTTAAAAGAAGCTGTATCAAAACAAAATCCTGGAACACCAGCTAAAAAC ATTAAAGAGATGAGTAAAAAATCTGAAACAACGTCAAAAGATGTTGGTGG AAACCAGTCTATCTTACAAGAAGTTGAAAATGATACACATGGTTTCTACG ACGCGATCGATAACACAAAGGAAGCCCTCATAACCAAATTGAAAACTGGT GGATTGAGCATAATAGAATCATTAGAAGGGAATGTAGATAAACCTGGCAT CGGTGCAAAGAAGAATGAAATCAAAGGAAAGAAAAAGAAGGATAAGAAAA CTTATGAAGAAGATTATAAACGAGCACTATTAAGTCAAGGTGACTTGGAA CAGAAATTGGTTAGCTATTTCACAGACTATATTTGTGGTAACGACTGTTA ACGAAACAGCGCATTCGCATTCAACCAGAGCTAACCGTACATAAAACTAA TGTTCATTTGCACAAACAACCGTCAGCTACGTGTTTATAGCACATATAAT CATAGAAAGCTTGAGAAATACAAACTCTTTCACGGCTTTCAGACAAAGAA TACAATAAGAACAGTGAATTCTGTTGAGCAAGAGGCCATCAGTATAAATT AATTACATTTTTTATCTTAATTTTTTTTCAAATTATCCGTGTAAATATAT GAAAAATAAGTTATCACAAAAGCTTCAAAATATAATCAAAATTTGTCGAA AAATATATTCACCTCCATTATAGCTCTGCGACAGAAGGAGGATTTGAAAT TATATAAGACCTTTCAAAATCTGAGAAAGGTTTACCATAAATAAATCAAT CACTTACATTATCACGGCCTATCACTAACCAAACAACCTAACATGTTGAT CAAAATATTTCTAGTGTCTCTATCTAATTTGATAACAAAATTGTTTTTAT TTTTACTGGTTAACGGCCAACCAAATCAAACAAGACGACTTGAAGTCGAA AATTTCGCCTAGAATTTGAACTGCGTAGGAAAAACAAGAAGTAGAGATTG AAGCCAATTTGAAATCTACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGCAGTCCCTTGTTTACTTTGTAAGAACTAATTACCGAAAGGT ATATCACCGTCTATCGAGAGTTATTGATTTGATTCTTATAAAGTAAATGC TTAAGAAAAATAAAAATGCTGATGTTGTGTGCCATCCCTTGTTTACTTTG TAAGAACTAATTACCGAAAGGTATATCACCGTCTATCGAGAGTTAATGAT TTGATTCTTATAAAGTAAATGCTTATAAGAAAAATAAAAATGCCGATGTT GTGTGCCATTGCTTGTTTACTTTGAAAGAGCTAATTACCGAAAGGTATAT CACCGTCTATTAAAAGTTATTGATTTGATTCTTATAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGTTATACGAGCGTGTAA TTTGTAAATTAAATTTAGTGAGTTCGTCCACCGTATCAAGCACTTTCGTT TTCTAATTTTTTTTCCAATGACACCGCGAAAGGCTATCGTAATACTTTCG CTATGCGAAATTAATAAGAGCTTATGAAAACTCCAATCTCGTCCCAACCA ACCACTTTATTGAAAGAAAAGTCTCTGTTAGAAGCCAAAGTTTATAGTAT CCTCTCATCTCATTGGTCAACGACCACAAAATCATGGTGAGTAAAATTCT CATTTTGTTTTATCAATTTCAGGTCTATCACAGCAATATCAATCGTATTT AAGGACACAATATCCACAATATTATGCATACCAAGCTCAACAACAGTACT TAGCACAACAAGCAACCGAAGAACAGAAAGCACATCAAGTAGAGTCCAAC CCTGCACCAAATATAGTAGCACAAATGACGGATCTAGAACACGACGTATC CGGTTTCCATGATGCTATGGCTGGTATGGCTGAAGCTATGATCGTTACTA AGCAAAATAAAGATGGTAGCTTAACAGTGGAAGAGAAATTAGAAGATGCT GAAAACGGGAAAAAGAAAAGTTCAGTCAATAAACATAAAAAGAAAGCAGC CAAAAAATTAGCATCTGAAAGACGGAGATTTGAGAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049510TCONS_00049510Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049510-proteinTCONS_00049510-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:300174..307211 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.87 2.81 1.2 1.38 4.02 5.33 20.02 22.33 32 19.47 29.13 27.47 37.66 31.87 30.74 56.77 53.92 56.74 3.37 7.06 40.07 38.77 29.54 32.37 31.9 41.73 18.19 11.96 13.55 11.2