XLOC_030308 (gene) - C. hemisphaerica

Overview


Name	XLOC_030308
Unique Name	XLOC_030308
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_132:124770..139470-

gene from alignment at scaffold_132:124770..139470-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_030308 ID=XLOC_030308|Name=XLOC_030308|organism=Clytia hemisphaerica|type=gene|length=14701bp|location=Sequence derived from alignment at scaffold_132:124770..139470- (Clytia hemisphaerica)
GGTGAAGAAGCACAAAGTTATTCCTTCCGCACAAGATTTTGAAGTGAAAG
AAGGTATGTAATTCATATTCAAAAATTTATACCTTATCGGCCAAAACTTA
GTCGGCCTTAATATTAGTCGGCCTTAATTATTAGTCTGCCCTGATTTTAG
TCACCTTGTCAAAATTTAGTCACTAAGGGCCGACTAATAATTAAGTTTTG
GCCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAANN
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GGGTCTGAAGTTTGTCGAACAAAGATTGTCTTGCATGGGAATATATAGAG
CAGTGCAGAAGAAAGTGCTGAGTGTTTTCAACAGAGTTACTTCGGCAACC
ACAGAAAGGGTCTAAAGTGTCGCGGAAGCCATGTCTAAATTTATGCCATT
ATGCCATTATGCCATTATGGCCATTTCTAAATTTTTAGTCGGCCCAAATT
TTTAGTCGGCCCCAATTTTAGTCACCAAGCCAAAATTTAGTCACTCAGGG
CCTGACATTATATAGTTGCAAAAGAATTGGTGCAGCTTTTCTAAAGGCTT
GGGGACACGAGAACATGGTTTCATTTTTTGTGAGGGAAATACACGCAAGA
TACACTGATTTTGTCCCAAAGACAAAAGTGCAGATTTCACATTTATTGGT
AAAAAGAAAAATGGGGTGGAGACACGAGAAAGCGTTTCAGGTTGGTGGGA
TGGATCATGCTGCATTGCACCAACGCAAAAAAACTTCTCGTGTCCCCAAG
CCTCAAAACATTGACCTTTTTAGGGTTACTTTTAAAGCTGTTTTAGCTTT
CTTAGACCAAAGATTTTAGCCTGCACCGCCAAATTACAAAAAAAATCAAT
GTTCCGACTTAAAAATTCGAAATTTCCATGAACCCAAAGAAAATCAACAG
ATCCAAGACCAAGCATATAAATAAACTAGCCTGGATATCCAAGCTCAAAA
TTTTAGAAAAAACAAAATTTACAACAACATACAAAGTTCTAAAATTATAG
AGCTTGGTCTCCCTAGAGAATGAAAGTGCAAACCCATGTTTCCTAGCCAA
CCCAGGGCAGCAAAACAGAAATTAATAGAAAAGTCTTACAAGATCTAAGC
CCTATCTTCACTAGCAACTGGAGGACTATCCTCTTTTTGCTTAAGAATTG
CTCCGCGCCGTGTAGATTGGCCCTTACGGCTTTAGCGAAGTGAGCGCAAG
CAGGCAGACTGCATTCTCATGTGGAGAATGCAAAACGCTCTAGGGAGACC
AGGTTGTAAACCAGAACATAAAATATCAAAAACTAGACTGAAATAGTTTA
CAGCCTGGATATCCAGGCTAATAAATAAGCATGAATTAAGGCTGAAAATG
AGATTTTGCTAAGCATATTGGGCCTCGACCCGATTTTCCCGTATGCTTAT
AAAAAAAAAGTGTACCTTTTAAAACCTACAAAAAATAGAGGTACCCTCTA
TCTGAAAATTTAGGTGGAATTTGAGGCTGAAACTTTTTGTGTTGAAAGCA
CAAGACATGTATATGGTTTTTTCCCCAGCAGTGATGTTTTGTAAAAACCA
GTTTTCAGTTTTTCACGAGGAAGGGAAAAATGATCTTTTAGCTATTTACC
CCTTATAAAATGATTTTTCTCGAATTGCTTTTTATAAAATAGCTCTTTTC
ACTTATGTTACAATTCGATTATTAGTACATAATTATTTTCAAATCAAATG
TTAAAATCAAAATACACCTTAAAAACCTACACTATAACACCTTAAAACCT
ACACTATTAGACGTTAAAAACTACACTATTACACCTTAAAACCCATACTA
TTACACCTTAAAACCTACACTATAACACCTTAACATCTACACTATAACAC
CTTAAAACCCATACTATTACACCTTAAAACCTACACTATAACACCTTAAA
ACCTACACTATTACACCTTAACATCTACACTATAACACCTTAAAACCTAC
ACTATAACACCTTAAAAGCTACACTATTACACCTTAAAACCTACACTATA
ACACCTTAAAACCCATACTATTACACCTTAAAAGCTACACTATTACACCT
TAAAACCTACACTATTACACCTTAAAACCCATACTATTACACCTTAAAAC
CCATACTATTACACCTTAAAACCTACACTATAACACCTTAAAACCTACAC
TATTGATTTACACCTTAAAACCTACACTATAAGACCCTAAAACCTACACT
ATTACACCTTAAAACCTACACTATAAGACCCTAAAACCTACACTATAAGA
CTCTAAAACCTACACTATTACACCTTAAAACCTACACTATAACACCTTAA
AACCTACACTATTAGACGTTAAAACCTACACTATTACACCTTAAAACCTA
CACTATTACACCTTAAAACCTACACTATTACACCTTAAAACCTACACTAT
TACACCTTAAAACCTACACTATAACACCTTAAAACCTACACTATAACACC
TTAAAACCTACACTATTAGACGTTAAAACCTACACAATTACACCTTAAAA
CCCATACTATTTTTTAGAAAACTATATATATAACTCATTGATTAAAATGA
AGAATAAAACAAATATGCAATAAACTATAAAGTGACTGCAAAAAAGGAAT
GACAGGTAAGACAGGAAAAACAAAACAAAACAAAACCATACAAAGAAAAC
GACCCAGAGACTTTAGCATAACCTTGCCGTCACGCCGGGCTGAAAGAAAA
CACACGGAATACTCATGCGATAAATGATAAAAAGTATAAAAATTAATAGA
AATTTGATTTGCATTAAATGTTCTGGTTTAAGTTATTTGCCATTTCGGCG
AAATCAACATCAGCCATCTCGATGGAGTGTTGATTCCTTCGTGTTCCTCT
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NNNNNNNNNNNNNNNNNNNNNNNNNGCTGGAGTGTCTTCTTGCTTTTTCA
TACATTTGTTTCTGTGTCTTGTCCTTCCACCTTTGTTTTGAAATTCTTTC
CCACAAAAATCGCATGAATATGATCCCGGTTTGCTCTGCGTTGCTTGGGA
CAAGGGGATGATCTTGTTGTTTGGTGGTGATTTTTCTTGTTCTTGCTGTC
GAGGTCTCGCTACCGCTTCAGAGAATAGCTGAAAGAACGATTTCGCTGGT
TGTATCGCCTTTGTTGAGGAACAAGCAAAACTTTTCATATTTTCAGCTGT
CTTCAGGCCTGGACCAGGTGTTGATTGGTCACAAGTCTCATCTTTTTCAC
ATCCTGTCGCCATTTCGAAAGCAAGCAAAACAGGGCAAAGTGTGGTGTAT
TCTAGACTCTTCACTCGTTCGACGAGACGCGTCTACCTCCTGGCCGCAGA
GGATTTTTCTTCGGGCTTAATATTCGAGCCTGTCAGTCCAACCGACCCTC
TGCACCCTTGACTGCGGGCGTCTTTTCTTCGAGGTACACGTTCGCCCTCA
CACTCACGCTACCTTGACTGCGGTAGTCTTTTCTTCAGGGTTTTTCGACC
TTGTCTAGCACCACTTCTGATTGTGTCGGGATAGATGTTTTGCGAAAAAG
AAGGCAGGTTCTGCTTGTGACACACGGAAGACTTTGGTTGTATCACGACG
CTTTCTTGAAGATTTCTTTCCGATATTCCAGATTTTAAACTCTTCTTGGT
TTTCTGTTCTCACCGGATTCTTTTCTTCTCCGCAACATGACCGTCCTACA
CTATTAGACGTTAAAACCTACACTATTACACCTTAAAACCCATACTATTA
CACCTTAAAACCTACACTATAACACCTTAAAACCTACACTATTAGACGTT
AAAACCTACACAATTACACCTTAAAACCTACACTATAAGACCCTAAAACC
TACACTATTACACCTTAAAACCTACACTATAACACCTTAAAACCTACACT
ATTAGACGTTAAAACCTCCGGGATTACACCTTAAAACCCATAATATTACA
CCTTAAAATCTACACTATAACACCTTAAAACCTACACAATTACACCTTAA
AACCCATACTATTACACCTTAAAACCTACACTATTACACCTTAAAACCTA
TACTATTACACCTTAACATCTACACTATTACACCTTAAAACCCACACTAT
AACACCTTAAAACCCATACTATTACACCTTAAAACCTACACGATTACACC
TTAAAACCTACACAATTACACCTTAAAACCTACACTATTAGTACTAGTAA
TCGTATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAACAAAGGAGA
AAATAGTAATTTGCACGAGTCCGAAGGACGAGTGCNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNAGCTATTGTAACGTAAAATTTCTTT
GTTCTTTTTTTTATATTGAAGAAAAAAAATGTCTTTGTTTTTTATTATAT
AGTAAAAAAAAGTATCTGACATAGAACTTGGGAGAGAAAAGAATAAGGGG
ACAAAAGTGTCCCCCCGCCGAAGAGTGCAAAAAGTGGTAATAGTGCAATT
AACGATTAATCGCACTCCTCTAAACCAATCAGATTCGAGTAATTTTGCAC
GGCTGACGATTACACCTTAAAACCTATACTATTACACCTTAAAACCTACA
AACATTGACCCCTTGCTCACAACTAACTGTGAAGTAGCAATTCAGGTGAT
GAACCGTGATTCAATCAAATACTTGCTCATTATCAAATTTGTGACATTTT
GGTATGCAATATGACCATATGTTTTTAGAAAGTCGATTTTCAGATTTTAT
TGGCCACCACCATAAATGAGCTTTAAAGTAAAACTTTGAGGGTCTTACGA
TTTCTTTGGGGTCTAACAATGAAAAAATAATTTTTTTCATACCTACCATA
TAGTACCTGTATAGGTACCTAAAAAGTGTAGGTTTTTGACCTTAAATTCA
ATTGTGTAATCTCTGGGTCCGAAAAACTTGATTTTTTGAAGCGGTTTTAA
TAAAATTTTGAATAACTTCGAATTTTACGACACTTTTCAATAATTGAAAT
TCTCAAAACTAGATATTTTATGATTCATGAAAGTACATTTATAAGGTTGT
AAAAAGGTGAATTATACAATACATTAAATTAAATTTGGTGGTTAAGAGAG
CCCAAAAATTTCTAGGTTTTAAAGAGACATAAAAGTAGTAAAATGTAAAC
ATTGTGCGAACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTCCA
AAACAAACTTGTAAAACAATTGCGATACAATCAAAATCAGCCATATTTGT
TTCAATTTTTCATTTTGACATGTGACATGTGTTTTGATTTTGTATCCCGC
TGCATACGGTTTGCTTACAAATTTCGTCAGTACTTTTATGTCCCTTTAAA
AGGTATTCACTGGTACAAAACTGCTATATACCTTAAATTCTATCAAAAGT
TACAGTTTCTTTGTCTCCACTGCAGATTATATTGAGGACGGGCTTGAATA
AATCTTTCAAAATTCATTAAAATCTTTTTTAAATCCATTTATCATGTCGC
TTTTTGAACATGATTTACTTTTTCTTTTATAAGAACAATTTTAAAAGAAC
AATGAGGCTCAAAATCAGCGAAAAATAAGAACAATATTATAAGAACAATG
CTGAGCCTAGAATTATACAATTTCGGGGTCAAAGTAGTAAAAATTGAGTA
CAAATCCTAAAATACTTCAATTTCTTCATCCTATAAAGAAGAACGTCAAG
ATAAGAACAATTTGAGACTTAAAATGCCAAAAAAGTAAGAACAGTCTCGC
CTCATTAAAAATTTACTGGTGTTCTTATAAATAAAAAAGTGTATCTTTCT
CATTTCTTTAGTTCAAAATGGAACTACGATGGAGGAAATGTTACAAAACA
TTATACCAATGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGC
GATGCTACGAAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACC
GATAAATAAGAATTATTCAGAAGGTCACGCAGCACTCGTTGTAAGTTCAT
AGGATTCGTGCATCTGTTACATACTATTTTCAATTTTCAAAGGGGAAAAT
GCACAAATCTGTGCAGATCTTCTTTCGAGAAAAATGCTGAATTACAGAAA
CGCTTTAAATTTGAATATTTCTATAACCTCAAAATTTCAGGTCAAATACA
ATAATGCAGGTATTCTAATTCGAACTCCGATAAACAATGATGTCCATTTT
ACCGTAAGTTTCTTTTTACCTGGAGATCAAGAAGTGGATATGAAGATTGT
GAAATATGCTTGTGACGGATGCCCAGTCAGATTCAAAGCATTTGTGGATA
ACGTAGAAAAAGTTTCGTTGAACACCACTTCGACTGTTTGGTATAATGTC
AGCTGCTTTGCTCCATGGTTTAATGATGATATTGACAAAACGACTGATTT
GAAATATACATCGAACCCACCGTTATTTCGTAAGTTTATTCCATCCCAGC
TGGCACACAACGTTGTTTCAATGTTCATCTAACGTTATATGGACGTTATG
AACATCAGATAAACGTTGAAACAACATTGTGTGCCAGCTGGGATAGTCTC
GTATTTGCACTTTTGAGGACCTTAAAGTGACTGAAGCAATTTGGAACAAC
CCGCAGTTTTGACCCTTGAAAAATGGAGGGAGTGCTGATTAACCGTCGTC
CTCAGTCACTCAGGAGGTAGAAAAAGTAGAAGCTGTCGCTGAAAAACACA
CATAATACATAATCTGGCTTGTCTCATTCAATAGTCCCGTGAGGCAGTGG
CGATTCTGAAGGGGGGGGCAAAATTTATGACGGAGATTGTAAATGTTCGT
TAAAGTCCTCTTAGCCCCGCTACTAGGATAGTCAGCAAATATGAATATAA
GAATATCCCTGTCTCACAGTCCCATGGAACGTACTTATTTCCATAGTTGG
TATGATAGTTAATGTATAATCTGTAGTTCCTAGGTCTGAAAATTCAGTGG
GCATGGTTTAAGATTGGATTTTTTTTATTCATTGATGAATTTCAAATAGC
TATGAAAACAAAGACAAGTTTGTAAATTAAAGTTTTGTGAATTTATGAAA
CTCGTAATTGTGTTTCGAGTTGATACTTTTTTTACGAACACCCTGTACAA
GTGAACAAATTATTTGTTCCCCTTTTCTGAAAGGGGATAATCAGATGGTT
TGAGATATTTAGATTATACAGAAACCTTCCGTGGCCTCAAAGTGTTTTTG
TGTAACAATTTTTCAAAATCGAGTTATCAAAATTTGAAATTTTTGAAAAT
GGGTTCTAACGCGGTTCTTACGTTGAAATTTTATTACTTTTCATCCTAAA
AGCCAAAACCTTGTAACTTAAATATCTCGATTTTGAGACTTTGCACAGGA
CAATAGAATGATCTCACATGCTACATATTACAAACCATCTGGATATCCCT
TTAACCAACTAGGGAATTTCAATCTAATGGAGTTTTTATTGTGAAATTTC
TAGCCTCCATTATAAAAAGGATATCTTTTTTTTGTTGAGCTATATGCTGA
TGAAGTCACGAAAGATGACGAACATTTCAACATTTTTCTGTTATATAAAT
TGCTGCTTTTACATTTCATGTTTTCCTTTAAACAACCATAGGCGGCGAAC
AGTCATTCAAGCCTACTACTTTATTAGCAACACTTCCATCATGGCCCAAT
GCAAATACACCCTTCCATGTATCCTTCAAAATCAAAATTGTCGCATGGTT
GAACAATTGGCATCCGATTATAAATTTTCACAACAATGATGGAGCAGAAA
CTCGGCTTCCAACTTTCTTTTTCACTGCTTATAGGGTATTGAGTGTTTTG
TTATTTTGTTAATTTTAGCATCTTTATTATACAGCGGAGTCTGTTCAACT
CGAACTTCTATTACTCAAATGTCTTCTTAATTCGAACACCCTTTACCCAG
TTGGCACACAACGTTGTTTTGACGTTCATCTAACGTTATATGGACGTTGT
GAACGTTAGATAAACGTTGAAGCAACGTTGTGTGCCAGCTGGGTATGGTC
TCTTCAGTTAAAGATGCCTTATAAAGCAATCTTCACCTTAACTCAAAATT
TCCGTATTTCGAACAAATTTGTGTTCCTCGTGCGTGTTCAAGTTATGGAG
ACTCCACTGTATAATAAAAAATCTTTCCTCTTGCAGTTAAAGAAATTATT
GATTCATTGACAGACAAGTAAATGGGCTATCGTACCATTTCACCCGGGGG
GGGGTGTCGGGGTCTCTCTAAGGCTTGGAAAAATGAGAAAGTTTAAATTA
GTCTCTCTAAGGGTCTGAAAATTCACGACTTTAGGAAATTTTTTTAATTT
CAAGTGAAAAAATTGTAAAAAAGTCTCTCTAAGGGTACCACTCTTTTCAA
AAATCGAGAAGAAAATTTTTCAAATAAGTATCTCTAAGGGTCAGTTTTAA
ATCTTAAAACCCTTAAACAACATCTCACATAAATATTTTGATTTTTCTTG
GGTATTTCGGCGTCGAAAAACATTATTGGTTTCTTCAATCTTTTAGATTG
TTGGATCGTATAAAACCGGTGCTGCTAATTTTAATAACATTGGAATCGTG
CCAACTTCTGACATCACATTGAATGAGTTCCACGAAGTTCGCTTGGAACA
GACGATTGACGCTAACGGTGTTGGTTTTATCAGATTTTATTTCAACAATC
AGCAATTTGGATCTGCCGAACGAAACTATAACCAAGCGACACCTTTTACA
GATGTACACGTTAAGATTCATTACAGCAATGGTTTTGATTTTGTCATTAA
AGAATTTGATTATAGTGGAAGTGATTAGTCAAAAACCAAAGTTTCTCGCA
ATAAATATGTACAATAATTATATAAGTACAATAGATCGTATTAAATACAA
CGTTAACATGGCGTTCGCTTGGAACAGACGATTAACGCTAACGATGTTGG
TTTTGTATTTAATGTACAATCAGCAATTTGGATCTGCCAAACAAAACTAT
AACCAAGCGACGCCTATACGAGAACAATAATTGGAGCCAAATCTTATATG
TAAATGTAGCGATGCACGTAAAACAACATAGGAAAAAGCAATTTGTTAGC
AATCCGAATTTTAAAACAAATTACACGCTTGTTTATAAGCACCAGTAAAT
TTTGGCTCAGACGAGGCTGCACTTAAAATTGCACTTAAAAATCATTCCAC
TGGATTTGTTAAAGATTTTTTTTTAAATAATAGTGATATGCTTAACCATC
AATTTTAACTTTCAAGCTTTTTCATATTGGATTGACACGGATGTGGAGCA
AGATTGGTCAGAAAGAGGAAAAATAACGTTTTTTGCTTATCAGCAAAATA
TAACAATAGGCAGACACTGTCCTGATATGAAATATGTGTCTAATATGAAA
AGGGAGCACTAAAAATAAAACTTTCAACCATAAAAACCCTGGTCTGGAAG
CCTTTTGTTTCTTTCCATTGTTTCTTACTTGAACTTGCGTTGAGAAATTA
GTTTGTTTTGCTCACTTTTTGATCATGTGATTAAATCTTAAACCAATCCC
AAGAGGAGTACTTGGTAACGTGATCAAAAACTGAGCAAATCATCTTTTGA
TAATAACAAAGGAAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGA
CCAGTGTTTTTTATAAGAACTATGCTTTAACCTTGGAACATAGAATTTCT
ATCCCCTTTGTGATTTCATTCGGAATCTTTATCCCCACTGTGGGAAAAAG
CTTCACCGGGACTGTGAGACAGGGCTGTATTTATGTCTGATTCTCATTAC
CTTGACCTTTAAGATGTTTGAAATTTCATTCGATTTCTGGCTTAGCATTG
TAAAATAATTTTTTTTTTAAACGATTTTAAAAGGTTTCGTTTAAATAAAA
GTGATATCGTTTGCTTACTGATCAATTTTCATTTACAAACTTTTTCGTCA
CATGGGATTAGACACGGATGTGGAGCAAGATTGGTCAGAAAAAGGAAAAG
AAAAACATTTTTTGCTTATATCAGAATAATATAACGATAGGAAGACACTG
T

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00047585	TCONS_00047585	Clytia hemisphaerica	transcript
TCONS_00047584	TCONS_00047584	Clytia hemisphaerica	transcript
TCONS_00047583	TCONS_00047583	Clytia hemisphaerica	transcript
TCONS_00047582	TCONS_00047582	Clytia hemisphaerica	transcript
TCONS_00047581	TCONS_00047581	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00047582-protein	TCONS_00047582-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_132	supercontig	scaffold_132:124770..139470 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23	0.4	0.68	0.91	0.72	0.41	1.32	0.96	0.7	1.01	0.53	0.78	9.55	8.51	6.22	5.77	3.31	4.18	11.27	10.43	11.54	7.85	2.8	3.58	3.84	6.12	2.87	2.71	10.52	8.64

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XLOC_030308 (gene) - C. hemisphaerica