XLOC_009575 (gene) - C. hemisphaerica

Overview
NameXLOC_009575
Unique NameXLOC_009575
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000259:297212..300621-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009575 ID=XLOC_009575|Name=XLOC_009575|organism=Clytia hemisphaerica|type=gene|length=3410bp|location=Sequence derived from alignment at sc0000259:297212..300621- (Clytia hemisphaerica)
TGGATGGTAAATCTAACACGGCACTTCATTGTGATGATGATACGAAGAAA
AATACAACCAAAGGTTTGAACTAATACAGTTCCTTACTCCATTGTACCAC
TTCAGGTGTTAGCTCGATTTGAATATGACCGTATGTGCGGGCCAAAATCA
GGTCTTTATATAATCAAACCCTTACAGTGCAGAGCTCATTTTGACCCTTA
CAATGCACTTTAAGAGGCCTGAAAATCGCACCCTCAAGAACCGCACTTAC
AGATAGTTGGTTACGTTGAGTTACCGCACTCCCCGGCAATTGTACCGATT
TTTTTATAAACAACCTCTCCGATAACGATCTTTACATCCAGTTACTTATT
TACATTGGCAAAGCTCATAAGTTAAATATAAATTTACAAAATATAATTTT
GATAAACAAAGAATATGAAATTAAATACCAGTGGATACCCCTTAAAACCT
ATAGAAAATAAGATCATTGGTACTCTCGGGTACCTAATAGCCGGGGGATT
GGAATAAGCGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGGGTTGGAAAAATTCTCAAAACTTAATA
AGCGGGGGGGGGGTTGGAATAAAAATGTCCTGGGTGGAAATTTTTTGAAA
AGGAGGCTAATTCAGCAGAATTGGGACAAAATAGGGAACCTTCAAAAACA
TTTTCCCAAAAATTAATAAGCGGGGGGGTGGAATGAGAATCTCCTGAGTG
GAAAATTTTCGAAAAATTAATTAGCGGGGGGCGGCTATTAGGTAACCTAA
ATATTTTCAAAACTGTACGTTAAAATCAAATTGCAACTTAAATCTATTAC
ACCTTAAAACCTACAAACACCCCTTGCTCACAACTTACTGAAACTGTGAA
ATTGCAATTCAGGTGCTATACCGTGATTCAATTGATCAAATACTTGCTAG
AAATCCCCAATCCCCAAAAGAATATTTGTATTTTTCAGGATTTCATACCT
ATAATGCAATTATGCCTGTTTTTTGTTAAAAACGGCTTTGAAGGGTCAAA
CTTCTATTGACTTATGGTACTAATATTTTTTCTTAATCTCCATCAAATTT
GTGACCTTTTGGTATGCAATATCACCATGATTTTATTGGCTTTAGAATAG
AAACTTCAGGATCTTACGATTTCTTTGGGGTCTAACTATGAAGAAGAAAA
TTATATTTTCATACCTACCGTAAGTATAGGTACCTAAAAAGTACGATTTT
GTTACATTAAATTCTTTTGTGTAATCTCTAGGTCGGAAAAACTCAAATTT
TTGAAGGAATTTTAAGACACTTCGTTATAATTGAAATTTTCGAAACAAGC
TACTTTATGAAAGTACATTTATAAAAGGATGTAAAAAAGTGAATTATGCC
GTTAAATTAAGTTTGGTGGCTAAGAGGGCCCAAAGTCCGTCTTTGTAGGT
TTTAAGGGGTATGTGGTTTTAAAGGGGTATCCACTGGTATTTAAAAAATT
TCTACTTTACTTTACTTTAATTTCTACTCTAATTTTCTACTGCAATTTCG
GTAATTTTTCTTTTGACTAATTTTTAGTAACAACTGCTGCACCTAACAAT
GCCAAAATTGGATGCATCAATAACAAAAAGAGGTAAAATTTTCACAAATT
AATTGTGTTAATCCTTATCAAGTCTACAGGTCCTCCGGACTAAGAAAATA
AGACTGAGAATTGAATTGAATAATTTGGTTGGGTTTACTTTTTACAAAAC
TCAATAATTTCTGGTTTTAAGAAAAACAATTTTCAAAGGCGACTTAATTA
AAAGCTTTGAAATAAATACAGGACTTTTTTGAGAATTTGCCTTCTTTCCC
ATTAGTTCGTCAGTACAACAGAAAACGGCAAGTCAAGAGCTGAAAGATCC
ACAAGGTGATTTATTCTGTATGGTACGTCAATATTATGTTCCTAACCAAT
CAAATGAGATGCCGTTATGTTAAAAATCATCCATTCGGAAGACATTTTTT
GTCATTATCAATGGTTGCTAAGCAACGTTGGCGGTAGATTGAAAAGATGA
TGAGAATGTGAAGCTACTACTGACTTTGGACCTTTTCAAGAGAGATTGAA
TCTCTACATTAACGGATTTTAAATTTTCCATGCAGCCCGATGTACCCCCT
GGACATCCTTATTTATAAAGTTGATTTTCCTGCTGATAACGTTTGCTTGC
TCCCTGGATATCCAATTTTGAGATCATTTACCCTATTGGCCCACATTGGT
CCCTGACAGAGCGGTGTTGTACAGTATAAGGCTTTTGGTTTGAGAGACCC
ATTTGCTCTGTCCCCCTCTGTCTCAACAGTGAACCCAACATCGTTAGTGT
ATTTGATAAAAATGCAGTATAAAAATAAACTGTACATGCTACATGTTTGC
TGAGAGTTAATTGTTTGTGTTGTTCAAGCTTGTGTTGAAAACTTGAAGAT
GGTCATACATTTTATCTCCGGTTTTAAAAGAGGATCTAATGTGATTTTAG
GCTTTCTAATTTTGAAATGAAATATACATTTAGAAATTTAATAGAATGTT
GTTGTATTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017122TCONS_00017122Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259supercontigsc0000259:297212..300621 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46	0.28	0.26	0.32	0	0.18	1.86	2.09	2.05	1.51	1.52	0.96	1.73	1.92	0.92	0.74	1.34	1.07	2.4	3.09	1.79	1.23	0.73	0.9	0.81	1.16	0.08	0	0.26	0.07