XLOC_005961 (gene) - C. hemisphaerica

Overview
NameXLOC_005961
Unique NameXLOC_005961
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000108:551944..555872+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005961 ID=XLOC_005961|Name=XLOC_005961|organism=Clytia hemisphaerica|type=gene|length=3929bp|location=Sequence derived from alignment at sc0000108:551944..555872+ (Clytia hemisphaerica)
tcaaaatagaaaaagaataaaatcaaatcaaaactttgGTCTGGTGTTCA
AGTGAAAAGTTTGCATAGTGAGGAGGTCCAAACAACTAACGTATAGATAA
AGATAGGCATCTAAAGGAACGATGCTGAACTCCCTCAGAGATTGTCTTGG
TTTGAATAAACGAACTTCTTTATTACTACTGGGAATCAATTCAGCTGGCA
AAACATCAATTTTGTATCGTTTATTGCTTGGAGAATTGATGAAAGTTATA
CCAACAGTAGGTAAATAGTTTTCCTTTATTTTGCCTTCTTCTTTGTCGTA
CACGAAGGTAGAATAAAAATGGTTcttgatacctctctgcttgatgctca
gtactaaagagaaagatcaagggtaagtggagcaatccagggaaaggaAT
GGCGCCCTtccctaccttcaggtagacAACTAGAGAAAAGGGTCAccctc
gactgcggtcacaCACTTACCaatgtaggatttgaagccactcATTCCCT
ACATGGGTCTGCGTGATTTTCATACAAATGCTGGATTGGAATAAGTAAGG
TTTGGATTGGAAAAAGTAAGATTTACtgccaaatttgaaaatgtaaaacg
caaaaacaaagaaaaagtttcatttcGTCATCCGAAGAGTGGCGTATATc
taaaggcttcactttttcttgcttgcgaaaggttgaagattcaccTCTGG
CGATCGGCTTTAAACTCAATCATTCttattttaatcaaaaatatatttca
aaaccaaaaaatttaaaaatccataactcggagtttcatgctctaagcaa
tcatcagatgtaactaaaaaattaaaaagctgtgtAAAAACATATGTTAC
AAAATTGGTAAATTGGTAAATCTTATTTTATGAAGGTTTCCAATCAGAAG
ACATATTACACAATGGAAATTATTTCAGAATTCTTGACATCGGAGGGGGC
TGCAAAATACCTCCATTATGGCGTCATTATTTCGAACATTATCAAGGTAT
ATAATATTTATTTGTTGTATAAAATGTCAGAAAGAattgttttagtgaaa
attataGGGCTTTGTATAAAATGTTACATTTGACCCCTTTTGATTAATCG
TATAGTTTGAAAAGATTGTTAGTGGTTTCCTAGCACCCACAACCTATAAA
TATCGTCTGAGTTTCAGAAAGccatttcttcaatttcttctagAGCCTCT
AATTATCAACGTGATAtagtcttcataactcgaacccgcatgaggaacac
aaatttgttcgagttacgaaggcattgttaacttaagggctctgaccata
gtgaatttttcataattgccgtgtttaaaatgtgttttctgactgattta
accaacaaaactatggcatgttatacatttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcaaacta
ttcctgaatctgaaaattcaaaaattgcattgaaaaaatttgatgaaaaa
gaaaatgaagacttttgcgagaaagagtatttcaactttgaagagcttag
tttcggcgaagaaaaaactttttgaaacatttttcgcagtagatggtgta
tcttttaccgaacaataaaaatttttgcggaaaatttttcttaatgcttc
tttgtctctaAATCTTCAAagtagtggtttttcatcaatttttcatctgg
attttgcttgaaaaaacagtcataacttttgacacatctttttagaaaga
ttttccgcaaaatttaaaatagttcaattcgttgcggacagtttgaaaaa
agttggaaacaaaaaggttaattacccattaaaacttagcactttttata
aaagaaggcgatgcaacatattattaacgtctttttaaagttcataacgt
catttttgcaattaagttcttaattactcttaaggggtttgattaaaaag
caatttataaaggcaattcttagGTAAAAGTGTTAAAGGATCTAAAACAT
agcttttatgttcagatacgaaaatcaattttctgactatggtcagagcc
cttaaggagagatccgagttcaagtctacTGTAGTTCTATGTAAGAGAAC
AATCATATACTTTatcatgcatgatttgacagtataaggcacaaaatcgt
gaaaatattgtcactcAATAGTACcgtccgcgaaattaagtccccgcgga
TATCTCAAAATTTCACGGATGAGCTCAAACGCAAAacttaatccccgcga
aaattaattccattAAAGTAGCTAAAATCATTTATAGACAAAagattaaa
ttgaaaaatatttttgaaatcattttcctaaaaaattatagcgctctgaa
ttatcttttcaacggtaaaTTGATAGCTAATTTCAGACTTTACTTACTAT
TCAAAACTACTATTGAAAACTTTCTTGGATTTAAAACACCTATCAACAAT
CTAAACGCTTAAGGTAGAAAAGTTCATTAAGTCTTTTTTTCACTATCTTT
AGGTATTATCTACGTGGTAGATTCGACAAGCCGTGATTACATTGAAGAAA
CAAAATCCACTTTATATCATTGCATATTAATTAAAGACGAAGCTCAACAT
TATCCAATTATAGTTTTTGCCAATAAACAGGTGCGATGTCAAAATTTGTA
CAAGGCTTACTCTTAAAATCGGGTTAAATCGAGGGTCTGTAGAAAGACTT
TTTTTCTGAATGCTGATTCACaggtttccaaattttttaaattatacagt
gtcccaaaaaagcggataaataaaatcctcaaaactcattacactctcgg
gtacctaataagcgtccccGCTAATTTTCATTCTTATCCCCCGCTTATTA
TTTTTTGGGaaactgtttttaaaacttcccccttttgccctaattctccT
GTATTAGCatcattttccacccaggacatttttattccaccccctCCCCG
CTTATCAAGTTTTGAGGTTTTTTCTCCTCCtactgcttattccaacccaa
CTACCCGGctaaacatgtttttttataagcattgcacttataagcatgtc
taggctcagatatgggaaaaaattaagcatatacTAAGCATTACCTCGAG
CCTATGAAAAAAAGTATAAGCTATTTTGTAGTATGGATATAAGCAGTATT
ATCTCTGatcctgttttcggatttttatatgcttataaaaaaacacgtaa
GGTACCCGATTGGATTTAGAATAATTGAAGTAAGATTAAACTTCCCGCTC
AATCAATAGATATTAGATTCCCAAGATAATTGAATATCTCATTGAAACGG
CTTTTTTTGGAACACACTGTAGAACTCAAAAGGATTAAGATAAATTGTTA
TCCTCTCTCTAAAAACGGAGATTAAAATAAGGAAATGAGATTGAATAATC
TTTATAATAGGACTTACCGAACGCAATGAGCACATTAGAAATCACCGAAA
AATTAGAATTGAACGAAATCAAAGATCGAAGTTGGCATATCCAAGGAACT
TCTGCTTCGACAGGTGAAGGTCTTTATGAAGGTTTAGACTGGATCTatga
tgaaatacaaaataaaaaacaggATTGAAAGATATGTTTATAGCACATGT
CTTTGGTTAGAATCATTGTGATGAGTTTAACACTGGAGAAGGagcgaaaa
caaaggaaattgacACGGTAGTAAATGTTTTGAAGAGTGTTTTGGCGCCA
CTGCCCGAGCAAGGAAACCTCTTAAACTTCAAGACAGGATGGTGAGTTCA
TCATTAAAAGATTTGTACATACCTATCAGAGGAAAGATACCATCAAATAA
TGTTTCCGTGTGGCTGCAATTTCTATCGGTGATGACCAACCCACCACGTA
GTTTTAGATTTCGCTCCGTGGATTACAACTAGCTTTATATTACAATCAAA
TTTGTTAACCTAGTTCTTGATTTTATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010642TCONS_00010642Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010642-proteinTCONS_00010642-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000108supercontigsc0000108:551944..555872 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18	0.56	0.3	0.29	2.42	1.54	1.01	1.74	1.18	2.06	3.15	0.64	1.95	1.7	0.3	0.48	0.53	0.51	0.42	1.27	0.25	0.25	0.15	0.73	1.74	2.65	0.06	0.19	0.54	0.3