XLOC_004533 (gene) - C. hemisphaerica

Overview
NameXLOC_004533
Unique NameXLOC_004533
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000081:618813..622263-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004533 ID=XLOC_004533|Name=XLOC_004533|organism=Clytia hemisphaerica|type=gene|length=3451bp|location=Sequence derived from alignment at sc0000081:618813..622263- (Clytia hemisphaerica)
TAAAAACATAGATTTTCCTGGTTGGTTTAAAATATGTTCGTTGATTTATC
GTATATAAAGCATACAGCGATTTCGGAAAAGTCACTTTAATTCGAAATTT
GACTTGAATTAAAACACGAGCAAGTTAGACACAACAACAAAGAAATTCAC
ATATCAGGCAGTAGCTAAAAAGTTAAATTATTTTTATCAACAAGAAGTCA
CAAGGAAAAACACACGATTTTTGAAACATTTTTTTAATCCAACGTAATAC
TTTCGATAACTAAAATTTTTGGAAACCATTAAATTATGAATCGTTATGAT
ATCGTGTTATTGGCAACTTTAACCATCTTTTATTCAATGGTGCTAGAAAA
TGCGACAGCGAAATCAGGATGCGGTTTTCGATGGCGGATACCGTGTCCAT
CTGATGGCAAGAAGAGAAGCATGGTAGGTTGGTTTTAAATGATCTCTGAG
CAGATTCTGATACTCCCCACATGGCACGTTTTCACTTTAAAGGCCATGGC
TCCGTAAGAGAATCTGCCCAGGTTGTCGCACTGCTTTGATCTTTTTCAAC
CAGATTTGGGATTAAATGAGCTTTTAAGCGCGATGATTGGCCAAAATAAA
ACAAACGCACAAAAACCAAAAGCCAATCATAATCATAAACATTAAAACCC
AGTCGCTTTCGTTTTCAAATTTTCAAAGGGAAAAGTCAACGCAGTTTTGA
ATGTTTTGGCTGAGCAACCATGTCAGATCATCACATTCGTCATACACCCC
TTTTGAGCAAAGCGTGGTATGCGTAGAATGGATGATCTGTTATGAGATTA
GGTTGGTTTTAAACAATTTTCATACAGTATAGTCCGTCCTGTTTCATTTG
GATAATATGGCCCTATACCAGCACTTTAATTTCATTGTTTTTGATAGTGA
AAAAGAAAATGTTTGTAAAGGGGAAAACTTCACCCTCCAACGGCCGAATT
TTTCAGAGCACTAAAAAATAAAAGAGGCCAAGGAGCGCGCTAATATTTGT
GTACACTAATTCTCAATCTTTCTGATTTTTTTAAACCTTTCCGTTACAAA
GCTGTAGGTTATATTTTGTTTTGTATTTTTAGAAAGGCCATACAAACTGA
ATATTTTCTAAAATATTTATTTTGGTGGACCTCAAATAAAAAGTTCACGT
TTTGACAAAAAATATCTGTTGCAAATTGGTTTTTGATGAATTTAATGATC
TGTGGAGAAAAGACAGACTTAACGCAAATACAAAATATCTGAAATTTCAT
AATCAGAAAGAAAATGAAGAGAGCTTTGGTTTTTATACTTTGCTATTATA
ATGTGGTTTACACGTATAACCAAAAACGTTTTCGAAGATCTAGGTGGGCT
TTTGATGTAAGTTTGAATGCTGGTTTAACGGTTTTCAATACGCATTATAA
GAACATTTCAAATTTTTGAAGCCTTCGGGTGTTCTTAACTTTTTGAGTTT
TAAGCCCAAATATATTCTTAACATGTTCTTATTTACACCATTTTGGGAAT
ATTTTTGACCATTTCCCTAAGAAATAGGGTGTTTTTGAGTCCACAATGCC
TCAAAATGTTCTTAACTTGTTCTTAACATTTTGGCCAGCGAAGCCTTGTG
TTCTTATATAGTTTGTTCTTATTAAAAAAAAACGTGTAGCATACAAGTAA
TTTAAAAGTTGCTAGAGTAAAATAAAATGAAAGATATATCTGAATGGTAT
ATATACACGCATTTTTTTAAGAACCAATAAATCTTTCCTGAGCCTGAGAT
TGTTCTTAAATATCTATTGTTCTCTATATATGAATGTAGAAATTTTAAGT
AAGGAATCTCAGACTTTGGACCAATAAGACCAGAGTGATTCCAGCTGAGA
TGGAGTTTTTAAAAGGTACTTTAATGATTGGTCATTTGAAGTAATAAAAA
TGACGCGTTCTTTAGAAAAAGTAATAAAATTGTTTTATACTGGTTAACGA
CCAATCAAATCAATTAAGAGCTTGTAAAAACTCCATCTCATCCCAGTGAT
TCGACTTTTGGAGAGAATAAGGAACTATACCTAAAACACCTTTTAATCCC
TTTTATCTTTTGAACTTTAACAAAATATTCGTTTTTCCCTTTTTTTATAG
ATGGCTGCTTCGAAGAAAAACATGGATCACAAATATGACTTAAATCAAAT
CGAGAACGATATCCTGGCAGAAGTCATGCATGAAAACCACCTTAATGATG
TCGAAGATGGCCCTTCAAGAGATAACCTTTACACAGAAAAGAACATTCGA
CATCGGGCGAGTTTAGATTTATCGAATAAGCGAGAGCAACAACAAACGGC
AGATGAGTTATCGAGGCTACACAAAATGGGAGCTAAGCTGCTAGAAAGTT
ATTATGACGAAATGAAAAGAGGAACGTCCGAAAAATTTGATGACGATGAT
GATATGGATGAAATCAACTTTTGATNAGTTTGTTCTTATTAAAAAAAAAC
GTGTAGCATACAAGTAATTTAAAAGTTGCTAGAGTAAAATAAAATGAAAG
ATATATCTGAATGGTATATATACACGCATTTTTTTAAGAACCAATAAATC
TTTCCTGAGCCTGAGATTGTTCTTAAATTTCTATTGTTCTCTATATATGA
ATGTAGAAATTTTAAGTAAGGAATCTCAGACTTTGGACCAATAAGACCAG
AGTGATTCCAGCTGAGATGGAGTTTTTAAAAGGTACTTTAATGATTGGTC
ATTTGAAGTAATAAAAATGACGCGTTCTTTAGAAAAAGTAATAAAATTGT
TTTATACTGGTTAACGACCAATCAAATCAATTAAGAGCTTGTAAAAACTC
CATCTCATCCCAGTGATTCGACTTTTGGAGAGAATAAGGAACTATACCTA
AAACACCTTTTAATCCCTTTTATCTTTTGAACTTTAACAAAATATTCGTT
TTTCCCTTTTTTTATAGATGGCTGCGTCGAAGAAAAACATGGATCACAAA
TATGACTTAAATCAAATCGAGAACGATATCCTGGCAGAAGTCATGCATGA
AAACCACCTTAATGATGTCGAAGATGGCCCTTCAAGAGATAACCTTTACA
CAGAAAAGAACATTCGACATCGGGCGAGTTTAGATTTATCGAATAAGCGA
GACAAGCAACAACAAACGGCAGATGAGTTATCGAGGCTACACAAAATGGG
AGCTAAGCTGCTAGAAAGTTATTATGACGAAATGAAAAGAGGAACGTCCG
AAAAATTTGATGACGATGATGATATGGATGAAATCAACTTTTGATTTCAA
AAAATGACTTTTAGACTTGTGAATTTATGATAAATAGATTGACGAAGACT
GAACTCTATAAAAAAATACAAATATGTAGAGTAGAATAGAAATGTATGTT
AGAATTTGCTCGATTATAACGCTATAATTTTAAATGGAAAATATTTTTAC
GAATCAAAACCAAATTAAAATAAAGATTGTTGCAGATTGACAATTTAAAA
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008055TCONS_00008055Clytia hemisphaericatranscript
TCONS_00008054TCONS_00008054Clytia hemisphaericatranscript
TCONS_00008053TCONS_00008053Clytia hemisphaericatranscript
TCONS_00008052TCONS_00008052Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008053-proteinTCONS_00008053-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:618813..622263 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.36	0	0.39	0.19	0.35	0.77	0.49	0	0	0.35	8.54	8.78	0	0.05	11.48	8.88	27.59	16.45	41.83	41.62	11.24	16.77	33.8	37.32	0	0.11	0.96	0.33