XLOC_003686 (gene) - C. hemisphaerica

Overview
NameXLOC_003686
Unique NameXLOC_003686
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:329203..333077-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003686 ID=XLOC_003686|Name=XLOC_003686|organism=Clytia hemisphaerica|type=gene|length=3875bp|location=Sequence derived from alignment at sc0000067:329203..333077- (Clytia hemisphaerica)
AGATAGATAGATATGCCCTCCGATGCATCGGAATGGGTCCTACCCACGAT
GGAGTAGGAATCACAGCGCAAGCAGACATTGCAACCCTGCAGATGCGAGC
TGCCGAGCCATGGTGTATACCATGCCACTCGAACTACACGGGAGAACGGA
TGTTCCCGCNTTCAGTGATTTACAGTAAATGCGCTTCACGAAAGAAAATA
CTGATTGACACTTTGGAAACCAAACTAAACCAAGGCATTGATAGGTGATG
ATTCTGTCTTAATATTTTATTACTTCCTTGCTTTAAACCAGCATGTCAAA
GTTTCCATAGAAAATACATGTTTGATAAACACTATTTATCAAAAGATAAC
GATGATGATTGATTTTCCTTCAAAATACATGATTGATTTTCCTTTAAAAT
ATAAGGCTTCTTTTCTTAAAAATGCAAAAAATTGTTAAATTTTCCTTTAA
CATATACATATTGTTTATTTTGCTTAAAAAATGACATGGTTGATTTTCCT
AAATTTTCCTTGGGCCCTACTTTCTCTCAAAGTTCTTTAAATTAAAGGGG
CATTAAAGTAGTAAAATGTAAACATTGTGCGAACCACGTGTCATTAAAGA
GAACAATTAAAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GTTTGATTTTTTATTTTGACATGTGACATTTGTTTTGATTTTGTATCCGC
TGCATACAGTTTGTTTACAAATTTTGCAAGTACTGTTATGTCCCTTTAAA
TCATATATTGTTGATAGTTTTTTATTTATTTCGTTTTTTTGCAGAGTGTT
GAGTAGTATGGTGAACTACTTGAAGTTTTTGTTGAACTCCGAACAAAAGA
AGACAGATTTCCGTCCTGAAAACGAAACATTGGGAGCTATGGCGCAAACA
ACTGTAAGGAGACCCTGTTATTTTTGTAGTTTCTCTCTGATAAAACGTTC
TCCCAAATATTACATAGCGTCAGCCCCCCCCCTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACACCCTAAATTTTTCCCA
AAAGAGGAGGGGGCTGGAAGTACACCACTTTTTTGGGGGGACCTATGTAC
TTGGGGGGAGCTAAAATCTCATCACTTAACGTGGGGTCTAAAATAATTCA
GCTTCATAGTTGGCTTCAATTACTCAAATCGGAGCTCATGAATCTGAAAA
ATTTTCGCCTACGGCGCAATATTTTTGTAGAAAGTGTGCAAAATTATTTA
TCTTAAACTTAGAACTGAACGCAATTTACATTGGAATAACCTTTTTTACT
GGATCAATTTTTTGAAAGTGTCTTGGGTCAAAAGTCCTGGGGGCTAACGA
AAAATTCATAAATCTTTGGGGGGACTTAAAATTCAGGGGGGGGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGG
GGGCTAAAATAATTCAGCTTAATAGTTGGCTTCAATTACTCAAATTGAAG
CTCATGAATCTGAAAAATTTTCGCCTGCTGTGCAATATTTTTGTAGAAAG
TGTGCAAAATTATTTATCTTAAACTTAGAACTGAACGCAATTTACATTGG
AATAACCTTTTTTACTGGATCAATTTTTTGAAAGTGTCTAGGGTCAAAAG
TCCTGGGGGCTAACGAAAAATTCATAAATCTTTGGGGAGACTTAAAATTC
AGGGGGGACCTAGTTTTTGCCTGGGACCTAAACCCAGGCTGACGCTATGT
ATTACCCGCTTTGAAAATCTACTCTAAGAAAACAAAATGGTTGGGTCAGA
GTTTCGCACGGTTTTTTTAATTGTTAGATCATATTTGATGTTCCTTTCAA
CAATTCATTTCATCAATTACTCTGAAGGCACACACAAAAATCCTTTCTTC
GAGTAATTGGTCTAAATCTGCTTAACAGACACTCATCTTCTTGAACCTAC
AGGCTTGTCAAAAGTGTTGTCGGTACATCAAAAACGTGCTCCCCGAGTTA
AGGCTCGGTTTAGATGGCAAGAATTTGGAATTGGTGTTGACGGAGTTTGG
GACGCGTTTTCATAAGCTGTTGTTGGATCACATGTACCAATATATTTTCT
CCGACATCGGTAAGACTTTTTATATGTCGCGGTGTTGGCTTTTGGATGGA
ATATCGTTGAGATTTTTTGCACTCAAAGTTATTTGAATTCCGAGTTGAGC
CTAGAATTTGTTGAATTTCCCGTCTACCATTTCGCCGTTTACGTGATTAA
ACTTACTTCAATTTTAATTATACAATTTCTTTCATAAGAACTTTCAACAT
TTTTGAAAGGTGTATGCAGAGGTTTAACTGTCTGTTTATTTTTCTTTCAC
TTTCCCCAGGAGCGATGATAGCGTTATGCGACATCAACGAGTACCGCCAC
ACGATGAAAGAACTCAAAATCCCATTGGTCGAACGTTTGTTCGGTGTTTT
GTTGGCCTTGTTCAATTTGTTGGTCGTCCAACCAGATAATCTGAAGGAAG
TGGGTAACGATGAACAGCTGGTAAGTGAGACCACGCCCTTCTTAATTAAG
AGCCTCTTAAACATGGGTGGGGGTTGGCAAACGAATCAAACGTATATACT
TCAATGTTTTACGAAAGTCCAGGTAGATTTTTAAACCAATCTTAAGTAGC
TAGTAGGAAATGTAAATTAGTTATTCTTTATATCCTTTCTTATGTAACCA
TTTTCATAGATATGAAAACAACAACACTTTTTAAACGTTTATTTTTTCAG
GCGGATATCGACAAAGCCGTTCTTCAACAATTCGTTCAGCTTCGAGCCGA
CTACAAACAACTCAAATTAGGGAAAGTGTTTACGTAAATTATTATTGTCA
AATTGTCAAATATTTTTATTTTTTAATTTAGATTTATCCCATTGATGATG
AAATTAATTAATGATTTTTACATCGAATACAATAGAATTATTTCATTGAT
CAAATGCTACAAATCAACCTGCTTTCCCGAAGACATTGACAGGCCTCCTG
TTAGTCTTTGAATTGTACATAGACAATTATTTTTTAAACTAAATACTACT
ATAAATCCTGTGAAGAAGTTCTGGTCGATTCCTTTTTAACCCGTCACTGT
CCCATAACGATTTNTTACGGCCTCGGCTATATATTAGAACGTAAATTTAC
GGCCTCGGCGTGGTAAAGGTTAATGATTATTACATCGAAAACAATATAAT
TATTTAATTGATCAAATGCTACAAATCAACCTGCTTTCCCGAAGACATTG
ATAGGTCCCCTATTAGTCTTTGAATTGTACATAGACAATTATTTTTTTAA
CAAAATACTACTGCTTTTATTAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006495TCONS_00006495Clytia hemisphaericatranscript
TCONS_00006494TCONS_00006494Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006495-proteinTCONS_00006495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:329203..333077 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.2	73.66	52.82	53.54	109.15	85.33	84.59	92.9	55.77	63.51	51.24	46.23	44.12	46.79	54.46	57.33	64.29	66.12	38.6	51.35	45.34	48.25	70.28	64.4	47.38	52.93	56.84	56.24	59.1	56.54