XLOC_027430 (gene) - C. hemisphaerica

Overview
NameXLOC_027430
Unique NameXLOC_027430
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004531:12..6532-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027430 ID=XLOC_027430|Name=XLOC_027430|organism=Clytia hemisphaerica|type=gene|length=6521bp|location=Sequence derived from alignment at sc0004531:12..6532- (Clytia hemisphaerica)
ATAACATAGATCTCAATAATATGAAAGCTACGCTGAAAGTTTGGCCAGAA GAAGTCGAAAATGCAGGACAAGTGACAGTTCTATGGGAGGGAATTCCCAA CCCATCAAAAACAGATAAAATTGGATATTACTGTCCTTATTATGACAACC CTACACATGGACTTGATTATATCGATGTCACAAAATCACCAACTTGGCAA GAAGGATATGGTTATTATACAGTCAAATTATACAACATGAGAGCTCCTTG TGCATTCAGATATTATAATGGTGGTAAAACTTTAGTTGCTATTAGCAACA AAGTGAGGTTTACAAATGGCGACATTTTTGNGGTGGTAAAACTTTAGTTG CTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGCTCCACTT CAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAGTTATGTG GAATTCTGCTGAAGGTACTTAAGTCCTTAAAAATAGCAATTTGTTTGCCT AGTCACTTAAGTTGTTATGCTTGAAGGATACAGAACTCAGTATCCTTTAA AAAGGAAAAGAACAGGGCCTGAAAGTAATGGTTGGTAGATAGCGATATAT TTATAAAGCCCGAAGGGCTAGATGACGAGATGTCGTGCTTTGGCTGAAAA GTGTGCCGAAGTTAGGTAGGAAATCGTACCTAGGTCGGAAATCCTACCTA GGTCGCAAATCCTACCTAGTTCACGTGACCTTACAATAGAATTTCAGTGC TTGACCAATAAGAAGTTTCACGGGTTTTCGAAAACAATAGCAGTAATATT TTTTGCGATATTCACATTTTTTTGCTTTGAAGAGTTTAAAGCACGGCATC TAGCACTTGGGGCTTTACAGAAATCTGTGAGACAGGGCTTTTAGATAATC TTTTGATTGTTTTGACGGAAGGGGCCCAGGGGGAGGAGACTCGGCTATTT ATGAACTGAACTGAAGGGAACATTGAAGCATTCCAACCGGCAACTCCTTG TTTGTGGAGCTAAAGCCTGAGACCAGTTGTTCATTTCTCCTCAAAAAACC CTATAAAGGTGTTCTTGTAAGTTTGTCTCAAATTAAGGATATTTTCCTTT TCATTTATCAGTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACAAAAG ACCTTGACAAAACACAAACGAAATATACCGTCAAAACTTACAAAGCTTCA GACATGTGCGAATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGGTA TATTTATGATGTTTTGTTGACTGACTTGGAACCCAACACGAGATATTATT ACTCCTGTGGTAGTAAAGAGGTAAAAATAAATACCAAGAAAAGACCTTAT TGAAGCTCAAGCTAGAACAATAGCCACTTGAAAATTCCACTTAATAATTT CGTCCCCTAATTTTAGTGTCAAAGGTTTTTCTTCAATCTTTAATAACGAC AATAATGTGGAGTCTTTTAATGAAACAGCAGAAGGAAGGTCTGTTGGAAA GAACGCCCTTTTAAGCATTTTGTTTCGGTTGATGAACACCAGATCTATTT TCGACATCTTTAAGCAATTTTAAAAGTAAACCTTATATACGTGTATTTCG ATCACAATCTTAGAATTTCCTTGATCCAAATAAACATCAAAAGTTAAACT TTCCTCTTTTCAATACAAAGGAATTCAGTATTTATATATCTTGAGAAAAA GTAAACTCGGAGTGTGTTGAGCCCTTTCGTAATACTCTTGTTGCCGGATC TTGAAAAAAATGATCCATTTTTTGTCTCCACATTTCAGTTTATGACGTCA GTGTACAACTTTACAACTGTGATCAAAGGAGGAGATAAGACTCCTTTCAA ATTTATCGCTTTTGGTGACATGGGAATCACCTCCCAAGCTGAAACAACCA CCAAATCAGTTCGCCAAGAGATCGAGAATAACGATGTGAAATTTGTTTAC CATGCCGGAGACATCTCGTACGCTCGTGGATATGTAAGAATCTTTTGTCA TTGAAAATTTAAACTTCATGTAAACTTTATGTAAAAACACTTAATTTACA TGAAAATCTTTAAACTTTCAGCGTACATTAATCTTCTATCTCGGACAGAT TTCCGTCTCAAGGCCATGGCAAACCAGTCCAACATTTCATGCAACTTTAT ATCCAGTGCTACATGGAGTCTTTCATCTACAAATGTTGGATGAAATGTTT GATTGCGAACAAACTTCATCGAACACGTTATTTTCTACTTTTTTTGAATT TTCCTTTTTTTTTGAAAATTTTACATTTCCACCAACTGTTCAAGAATTTC ATCCATCATTCGAAAAATAGCATGCTAGATGAAATGTTGCACCGGTTTGC CCTGGTCTTTATTGATTACTATCTGAGTGAAAAAAACTTTGCTTTCATCT ACCGACTATTTGAACTATTTTACTACTGACCTTTTTGTGTATGGTACAAA TATTTCNGCTCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAG AGATGAGAGTTATGTGGAATTCTGCTGAAGGTACTTAAGTCCTTAAAAAA GCAATTTGGGTGCCTAGTTACTTAAATTGTTATGCTTGAAGGATAATTAT AATTATAAATCACACAGAACTCAGTATCCTTTAAAAAGGAAAAGAACAGG GCCTGAAAGTAATGGTAGGTAGATAGTCATATATTTATAAAGCCCGAAAG GCTAGATGTCGTGCTTTGGCTGAAAAGTGTGTCGAAGTTAGGTAGGAAAT CGTACCTAGGTCGGAAATCCTACCTAGGTCACGTGACATTACAATAGAAT TTCAGTGCTTGACCAATAAGAAGTTTCACGGGTTTTCGAAAACAATAGCA GTAATATTTTTTGCGATATTCACTTTTTTTTGCTTTGAAGAGTTTAAAGC ACGACATCTAGCACTTGGGGCTTTACAGAAATCTGTGAGACAGGGCTTTT AGACAATCTTTTGATTGTTTTGACGGAAGGGACTCGGCTATTTATGAACT GAACTGAAGGGAACATTGAAGCATTCCAACCGGCAACTCCTTATTTGTGG AGCTAAAGCCTGAGACCAGTTGTTCATTTCTCCTCAAAGCACCCTTTAAA GGTGTTCTTGTAAGTTTGTTTCAAATTAAGGATATTTTTCTTTTCATTTA TCAGTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACTAAAGACCTTGA CAAAACACAAACGAAATACACCGTCAAAACTTACAAAGCTTCAGACATGT GCGAATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGATATATTTAT GATGTTTTGTTGACTGACTTGGAACCCAACACGAGATATTATTACTCCTG TGGTAGTAAAGAGGTAAAAATAAATGCCAAGAAAAGACCTTATTGAAGCT CAAGCTAGAACAATAGCCACTTGAAAATTCCACTTAAAAATTTCGTCCCC TAATTTTAGTGTAAAAAGTTTTTCTTCAAACTTTAATAACGACAATAATG TGGAGTCTTTTAATGAAACAGCAGAAGGAAGGTCTGTTGCAAAGAACGCC CTTTTAAGCATTTTGTTTCGGTTGATGAACACCAGATCTATTTTCGACAT CTTTAAGCAATTTTAAAAGTAAACCTTATATATTTCGATCACAATCTTAA AATTTCCTTGATCCAAATAAACATCAAAAGTTAAACTTTCCTCTTTTCAA TGCAAAGGAATTCAATATTTATAATTCTTGAGAAAAAGTAAACTCGGAGT GTTGAGCCCTTTTGTGATACAGCCTTGGCCGTTTTTTGAAACTGATTCAC TTTTTCACCCACATTTCAGTTTATGACGTCGGTGTACAACTTTACAACTG TGATCAAAGGAGGAGACATGACTCCTTTCAAATTTATCGCTTTTGGTGAC ATGGGAATCACCTCTCAAGCTGAAACAACCACTAAATCAGTTCGCCAAGA GATCGAGAATAACGATGTGAAATTTGTTTACCATGCCGGCGACATCTCGT ACGCTCGTGGATATGTAAGAATCATTTGTTATTGGGATAGTTTAGACTCG AAGTTTTTATTGATAATTTAGTTCAAACTTTTTCCACTTCGGAGGGATTT CCATCTTAGCAAGGCCTTCTCCATTATCGGATTACAGTAGAGTCTCCTTA ACTCGACCACCTGGTTTATAAGGCATTGTTAACTGAGGGTACCAGCAAAT TTGGTCAAGTTAAGCATATTTGCATAAAAGATTTCGAGTTGCAGAGGCTC CACCCTCACTGCAACATCTTTATTTTGACAACTGACATTTACGCGTGTGG TACAAATGTTTACTCTCCTTTCTCCTAAGGCGTACCTGTGGGATCAATGG TTTCACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGATTAACCT GGGTAACCATGAGTACCAACACATCTATGCATTTGATAAAGACCCTTCTC ACCAACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGGATCTTTC GGTGAATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTGATAACGG ACTCGGTATATTCTGGTATGTGTTTCCTGAAACATTTATGTAATCTTAGT ATTACCCCAGCTGGCACACAACGTTTTTTTGACGTTTATCTAACGTTCAC AACGTCCATATAACGTTAGATGAACGTTGAAACAACGTCGTGTGCCAGCT GGGACTATTTATAAAAAGAACATCGAGGATTATGAAAAGTTTCAAAATGT AAATAAGAGATTGGATCTTTTTTCCATTCAGTTTGATTTTGGAAATTTTT GATGATTTTGATTATTGATATCAGTACAATAGCNCCGATGTGGCATCCAT CATGGTATAACGGAGGTCAAGGATCTTTCGGTGAATGTGCTATTCCAATG GTTAATCGATTTCATATGCCTGATAATGGACTCGGTATATTCTGGTATGT GTTTCCTGAAACATGTTTATGTAATCTTAGTATTTATAAAAGAACATCGA GGATTATGAAAAGTTTCAAAATGTAAATAAGAGATTGGATCTTTTTTCCA TTCAATTTGATTTTGGAAATTTTTGATGATTTTGATTATTGATATCTATA CATACACTATTTCATAGTGATTTTTCTCTTATTTGTTTTCTTAGGCATAG TTATAACGTTGGTTTCATTCACATGGTCTCCATCAGCTCTGAGCACGATT ACCGAGAAGGTTCACTACAATATAGATGGTTGGAAAATGATCTGAAGAAT GTCGATCGCACCAAAACACCTTTTGTGATCGTTAGCGCCCATCGACCGAT GTATTGCAGTGAATATTACCCAGGTGAGGTCAAAATTACGGAAATTGCTA TAAAATCTTTTCTTTTGTGATTTTCAACTTCTCAAAAGTTACTGGAAAGT GCCTAAGGGGTTGAAAATATGTGTGTATTCTGCAGGAATGTTATTTTTCG GTAAAAGCTTACTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGCG AGGTCGAAAAATCCCGAAATCTACGACATTTACTTTTGCGAATTTGACAA AAAAAATATTTTTTTTCGCCAATTATGTATATTTTAAGTAGAAAATCAAG TTTTCGGTACATAAAACCAGTGTTTTCATCGTTCAAATGTACTCAAACCG CAATTGATTGACTTTTGCATAATATCCACGCTAAATTTGATCCTTGTTAT CGTCAAAGAGTAAAGTTTGAGTAAATTTTCTTTACAGATTTCTTTTCGCG AGCATAAACTTTCGCGAATTGCCCCCTCAAGAAATTTCAAAGACATTTAC TTTCGCGAAAAGGGCTAGAATTCGCGAAAATCGCGAAAGTTTCTGCTCAC GAAAGTTTGTACGCCTAAAGTATTTCATGGAGATGCTGAAGTGTTTTTTC TTTTGTAGGACCAGATTGGACTACCATACTTGGCCAACAACAATATCTGG AAGATTTGTTATACAAATACCAAGTGGATGTCGGTCTTTGGGCTCACTAT CACATTTACGAACGAACGTGTAAAGTATATCGCAACGAATGCCGGGAGGA CGGGATAACTCATTTGGTGGTCGGTACAGGAGGTGTGAACTTGGAGATCA ATAAATGGTTCACAAAGGAATGGTCTAAGGTACGTGACGCTGATTTTGGT TACGGTCGATTCTCGGTGACAAACTCCACTCACCTTTTGTTCGAATTCGT GAAACTTAACACTGGGAAAGTTGGCGACTCGGTTTGGATCACCAAATAAT TTTTGATTAACTGATTTCTGACTACAGCGCCGTAGGAAGCATTTTCATAT TGGGGGGGCTGAAGTTTAGTGACACCGCGAGGGTCAACCATGGTTTGGCC CGAGGGGGGAAATTTTAAAAATTGAGCTCTAGATTGCTTAAAAATACACT CAAAACATGCACATAAAAGACAATTATGACAAATTAAAAAAGAAAAACTT TGCATTCATTTTGCAAAATAACCATTTTTGAAAAAATTATTGGGGGGGCA TAGCTACCCTCCCCTTGCCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043754TCONS_00043754Clytia hemisphaericatranscript
TCONS_00043753TCONS_00043753Clytia hemisphaericatranscript
TCONS_00043752TCONS_00043752Clytia hemisphaericatranscript
TCONS_00043751TCONS_00043751Clytia hemisphaericatranscript
TCONS_00043750TCONS_00043750Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043752-proteinTCONS_00043752-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004531supercontigsc0004531:12..6532 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.1 50.39 31.28 27.97 271.3 210.45 125.18 126.74 187.86 160.19 147.07 137.64 77.91 85.88 105.05 86.93 89.62 128.53 147.2 207.25 82.56 81.97 82.86 109.15 134.52 112.55 154.23 187.66 172.63 188.79