TCONS_00043752 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043752
Unique NameTCONS_00043752
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1553

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043752 ID=TCONS_00043752|Name=TCONS_00043752|organism=Clytia hemisphaerica|type=transcript|length=1553bp
TTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGC
TCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAG
TTATGTGGAATTCTGCTGAAGTCTCTGAAGGCATCCAAGTACGTTATGGT
AAAACAAAAGACCTTGACAAAACACAAACGAAATATACCGTCAAAACTTA
CAAAGCTTCAGACATGTGCGAATCGCCTGCTAACACAACTGGATTTTGGG
ATGCTGGGTATATTTATGATGTTTTGTTGACTGACTTGGAACCCAACACG
AGATATTATTACTCCTGTGGTAGTAAAGAGTTTATGACGTCAGTGTACAA
CTTTACAACTGTGATCAAAGGAGGAGATAAGACTCCTTTCAAATTTATCG
CTTTTGGTGACATGGGAATCACCTCCCAAGCTGAAACAACCACCAAATCA
GTTCGCCAAGAGATCGAGAATAACGATGTGAAATTTGTTTACCATGCCGG
AGACATCTCGTACGCTCGTGGATATGCGTACCTGTGGGATCAATGGTTTC
ACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGATTAACCTGGGT
AACCATGAGTACCAACACATCTATGCATTTGATAAAGACCCTTCTCACCA
ACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGGATCTTTCGGTG
AATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTGATAACGGACTC
GGTATATTCTGGCATAGTTATAACGTTGGTTTCATTCACATGGTCTCCAT
CAGCTCTGAGCACGATTACCGAGAAGGTTCACTACAATATAGATGGTTGG
AAAATGATCTGAAGAATGTCGATCGCACCAAAACACCTTTTGTGATCGTT
AGCGCCCATCGACCGATGTATTGCAGTGAATATTACCCAGgaCCAGATTG
GACTACCATACTTGGCCAACAACAATATCTGGAAGATTTGTTATACAAAT
ACCAAGTGGATGTCGGTCTTTGGGCTCACTATCACATTTACGAACGAACG
TGTAAAGTATATCGCAACGAATGCCGGGAGGACGGGATAACTCATTTGGT
GGTCGGTACAGGAGGTGTGAACTTGGAGATCAATAAATGGTTCACAAAGG
AATGGTCTAAGGTACGTGACGCTGATTTTGGTTACGGTCGATTCTCGGTG
ACAAACTCCACTCACCTTTTGTTCGAATTCGTGAAACTTAACACTGGGAA
AGTTGGCGACTCGGTTTGGATCACcaaataatttttgattaaCTGATTTC
TGACTACAgcgccgtaggaagcattttcatattgggggggctgaagttta
gtgacaccgcgagggtcaaccatggtttggcccgaggggggaaattttaa
aaattgagctctagattgcttaaaaatacactcaaaacatgcacataaaa
gacaattatgacaaattaaaaaagaaaaactttgcattcattttgcaaaa
taaccatttttgaaaaaattattgggggggcataGCTACCCtccccttgc
ccc
Run BLAST on NCBI

protein sequence of TCONS_00043752-protein

>TCONS_00043752-protein ID=TCONS_00043752-protein|Name=TCONS_00043752-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
LVAISNKVRFTNGDIFAPLQVHLAMTGKETEMRVMWNSAEVSEGIQVRYG
KTKDLDKTQTKYTVKTYKASDMCESPANTTGFWDAGYIYDVLLTDLEPNT
RYYYSCGSKEFMTSVYNFTTVIKGGDKTPFKFIAFGDMGITSQAETTTKS
VRQEIENNDVKFVYHAGDISYARGYAYLWDQWFHEIQPMSALAPYMINLG
NHEYQHIYAFDKDPSHQPMWHPSWYNGGQGSFGECAIPMVNRFHMPDNGL
GIFWHSYNVGFIHMVSISSEHDYREGSLQYRWLENDLKNVDRTKTPFVIV
SAHRPMYCSEYYPGPDWTTILGQQQYLEDLLYKYQVDVGLWAHYHIYERT
CKVYRNECREDGITHLVVGTGGVNLEINKWFTKEWSKVRDADFGYGRFSV
TNSTHLLFEFVKLNTGKVGDSVWITK
Run BLAST on NCBI

transcript from alignment at sc0004531:12..6189-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043752 ID=TCONS_00043752|Name=TCONS_00043752|organism=Clytia hemisphaerica|type=transcript|length=6178bp|location=Sequence derived from alignment at sc0004531:12..6189- (Clytia hemisphaerica)
TTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGC
TCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAG
TTATGTGGAATTCTGCTGAAGGTACTTAAGTCCTTAAAAATAGCAATTTG
TTTGCCTAGTCACTTAAGTTGTTATGCTTGAAGGATACAGAACTCAGTAT
CCTTTAAAAAGGAAAAGAACAGGGCCTGAAAGTAATGGTTGGTAGATAGC
GATATATTTATAAAGCCCGAAGGGCTAGATGACGAGATGTCGTGCTTTGG
CTGAAAAGTGTGCCGAAGTTAGGTAGGAAATCGTACCTAGGTCGGAAATC
CTACCTAGGTCGCAAATCCTACCTAGTTCACGTGACCTTACAATAGAATT
TCAGTGCTTGACCAATAAGAAGTTTCACGGGTTTTCGAAAACAATAGCAG
TAATATTTTTTGCGATATTCACATTTTTTTGCTTTGAAGAGTTTAAAGCA
CGGCATCTAGCACTTGGGGCTTTACAGAAATCTGTGAGACAGGGCTTTTA
GATAATCTTTTGATTGTTTTGACGGAAGGGGCCCAGGGGGAGGAGACTCG
GCTATTTATGAACTGAACTGAAGGGAACATTGAAGCATTCCAACCGGCAA
CTCCTTGTTTGTGGAGCTAAAGCCTGAGACCAGTTGTTCATTTCTCCTCA
AAAAACCCTATAAAGGTGTTCTTGTAAGTTTGTCTCAAATTAAGGATATT
TTCCTTTTCATTTATCAGTCTCTGAAGGCATCCAAGTACGTTATGGTAAA
ACAAAAGACCTTGACAAAACACAAACGAAATATACCGTCAAAACTTACAA
AGCTTCAGACATGTGCGAATCGCCTGCTAACACAACTGGATTTTGGGATG
CTGGGTATATTTATGATGTTTTGTTGACTGACTTGGAACCCAACACGAGA
TATTATTACTCCTGTGGTAGTAAAGAGGTAAAAATAAATACCAAGAAAAG
ACCTTATTGAAGCTCAAGCTAGAACAATAGCCACTTGAAAATTCCACTTA
ATAATTTCGTCCCCTAATTTTAGTGTCAAAGGTTTTTCTTCAATCTTTAA
TAACGACAATAATGTGGAGTCTTTTAATGAAACAGCAGAAGGAAGGTCTG
TTGGAAAGAACGCCCTTTTAAGCATTTTGTTTCGGTTGATGAACACCAGA
TCTATTTTCGACATCTTTAAGCAATTTTAAAAGTAAACCTTATATACGTG
TATTTCGATCACAATCTTAGAATTTCCTTGATCCAAATAAACATCAAAAG
TTAAACTTTCCTCTTTTCAATACAAAGGAATTCAGTATTTATATATCTTG
AGAAAAAGTAAACTCGGAGTGTGTTGAGCCCTTTCGTAATACTCTTGTTG
CCGGATCTTGAAAAAAATGATCCATTTTTTGTCTCCACATTTCAGTTTAT
GACGTCAGTGTACAACTTTACAACTGTGATCAAAGGAGGAGATAAGACTC
CTTTCAAATTTATCGCTTTTGGTGACATGGGAATCACCTCCCAAGCTGAA
ACAACCACCAAATCAGTTCGCCAAGAGATCGAGAATAACGATGTGAAATT
TGTTTACCATGCCGGAGACATCTCGTACGCTCGTGGATATGTAAGAATCT
TTTGTCATTGAAAATTTAAACTTCATGTAAACTTTATGTAAAAACACTTA
ATTTACATGAAAATCTTTAAACTTTCAGCGTACATTAATCTTCTATCTCG
GACAGATTTCCGTCTCAAGGCCATGGCAAACCAGTCCAACATTTCATGCA
ACTTTATATCCAGTGCTACATGGAGTCTTTCATCTACAAATGTTGGATGA
AATGTTTGATTGCGAACAAACTTCATCGAACACGTTATTTTCTACTTTTT
TTGAATTTTCCTTTTTTTTTGAAAATTTTACATTTCCACCAACTGTTCAA
GAATTTCATCCATCATTCGAAAAATAGCATGCTAGATGAAATGTTGCACC
GGTTTGCCCTGGTCTTTATTGATTACTATCTGAGTGAAAAAAACTTTGCT
TTCATCTACCGACTATTTGAACTATTTTACTACTGACCTTTTTGTGTATG
GTACAAATATTTCNGCTCCACTTCAAGTCCACTTGGCGATGACTGGAAAA
GAAACAGAGATGAGAGTTATGTGGAATTCTGCTGAAGGTACTTAAGTCCT
TAAAAAAGCAATTTGGGTGCCTAGTTACTTAAATTGTTATGCTTGAAGGA
TAATTATAATTATAAATCACACAGAACTCAGTATCCTTTAAAAAGGAAAA
GAACAGGGCCTGAAAGTAATGGTAGGTAGATAGTCATATATTTATAAAGC
CCGAAAGGCTAGATGTCGTGCTTTGGCTGAAAAGTGTGTCGAAGTTAGGT
AGGAAATCGTACCTAGGTCGGAAATCCTACCTAGGTCACGTGACATTACA
ATAGAATTTCAGTGCTTGACCAATAAGAAGTTTCACGGGTTTTCGAAAAC
AATAGCAGTAATATTTTTTGCGATATTCACTTTTTTTTGCTTTGAAGAGT
TTAAAGCACGACATCTAGCACTTGGGGCTTTACAGAAATCTGTGAGACAG
GGCTTTTAGACAATCTTTTGATTGTTTTGACGGAAGGGACTCGGCTATTT
ATGAACTGAACTGAAGGGAACATTGAAGCATTCCAACCGGCAACTCCTTA
TTTGTGGAGCTAAAGCCTGAGACCAGTTGTTCATTTCTCCTCAAAGCACC
CTTTAAAGGTGTTCTTGTAAGTTTGTTTCAAATTAAGGATATTTTTCTTT
TCATTTATCAGTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACTAAAG
ACCTTGACAAAACACAAACGAAATACACCGTCAAAACTTACAAAGCTTCA
GACATGTGCGAATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGATA
TATTTATGATGTTTTGTTGACTGACTTGGAACCCAACACGAGATATTATT
ACTCCTGTGGTAGTAAAGAGGTAAAAATAAATGCCAAGAAAAGACCTTAT
TGAAGCTCAAGCTAGAACAATAGCCACTTGAAAATTCCACTTAAAAATTT
CGTCCCCTAATTTTAGTGTAAAAAGTTTTTCTTCAAACTTTAATAACGAC
AATAATGTGGAGTCTTTTAATGAAACAGCAGAAGGAAGGTCTGTTGCAAA
GAACGCCCTTTTAAGCATTTTGTTTCGGTTGATGAACACCAGATCTATTT
TCGACATCTTTAAGCAATTTTAAAAGTAAACCTTATATATTTCGATCACA
ATCTTAAAATTTCCTTGATCCAAATAAACATCAAAAGTTAAACTTTCCTC
TTTTCAATGCAAAGGAATTCAATATTTATAATTCTTGAGAAAAAGTAAAC
TCGGAGTGTTGAGCCCTTTTGTGATACAGCCTTGGCCGTTTTTTGAAACT
GATTCACTTTTTCACCCACATTTCAGTTTATGACGTCGGTGTACAACTTT
ACAACTGTGATCAAAGGAGGAGACATGACTCCTTTCAAATTTATCGCTTT
TGGTGACATGGGAATCACCTCTCAAGCTGAAACAACCACTAAATCAGTTC
GCCAAGAGATCGAGAATAACGATGTGAAATTTGTTTACCATGCCGGCGAC
ATCTCGTACGCTCGTGGATATGTAAGAATCATTTGTTATTGGGATAGTTT
AGACTCGAAGTTTTTATTGATAATTTAGTTCAAACTTTTTCCACTTCGGA
GGGATTTCCATCTTAGCAAGGCCTTCTCCATTATCGGATTACAGTAGAGT
CTCCTTAACTCGACCACCTGGTTTATAAGGCATTGTTAACTGAGGGTACC
AGCAAATTTGGTCAAGTTAAGCATATTTGCATAAAAGATTTCGAGTTGCA
GAGGCTCCACCCTCACTGCAACATCTTTATTTTGACAACTGACATTTACG
CGTGTGGTACAAATGTTTACTCTCCTTTCTCCTAAGGCGTACCTGTGGGA
TCAATGGTTTCACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGA
TTAACCTGGGTAACCATGAGTACCAACACATCTATGCATTTGATAAAGAC
CCTTCTCACCAACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGG
ATCTTTCGGTGAATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTG
ATAACGGACTCGGTATATTCTGGTATGTGTTTCCTGAAACATTTATGTAA
TCTTAGTATTACCCCAGCTGGCACACAACGTTTTTTTGACGTTTATCTAA
CGTTCACAACGTCCATATAACGTTAGATGAACGTTGAAACAACGTCGTGT
GCCAGCTGGGACTATTTATAAAAAGAACATCGAGGATTATGAAAAGTTTC
AAAATGTAAATAAGAGATTGGATCTTTTTTCCATTCAGTTTGATTTTGGA
AATTTTTGATGATTTTGATTATTGATATCAGTACAATAGCNCCGATGTGG
CATCCATCATGGTATAACGGAGGTCAAGGATCTTTCGGTGAATGTGCTAT
TCCAATGGTTAATCGATTTCATATGCCTGATAATGGACTCGGTATATTCT
GGTATGTGTTTCCTGAAACATGTTTATGTAATCTTAGTATTTATAAAAGA
ACATCGAGGATTATGAAAAGTTTCAAAATGTAAATAAGAGATTGGATCTT
TTTTCCATTCAATTTGATTTTGGAAATTTTTGATGATTTTGATTATTGAT
ATCTATACATACACTATTTCATAGTGATTTTTCTCTTATTTGTTTTCTTA
GGCATAGTTATAACGTTGGTTTCATTCACATGGTCTCCATCAGCTCTGAG
CACGATTACCGAGAAGGTTCACTACAATATAGATGGTTGGAAAATGATCT
GAAGAATGTCGATCGCACCAAAACACCTTTTGTGATCGTTAGCGCCCATC
GACCGATGTATTGCAGTGAATATTACCCAGGTGAGGTCAAAATTACGGAA
ATTGCTATAAAATCTTTTCTTTTGTGATTTTCAACTTCTCAAAAGTTACT
GGAAAGTGCCTAAGGGGTTGAAAATATGTGTGTATTCTGCAGGAATGTTA
TTTTTCGGTAAAAGCTTACTTTAGGCGTACAAACTTTCGCGAGCAGAAAC
TTTCGCGAGGTCGAAAAATCCCGAAATCTACGACATTTACTTTTGCGAAT
TTGACAAAAAAAATATTTTTTTTCGCCAATTATGTATATTTTAAGTAGAA
AATCAAGTTTTCGGTACATAAAACCAGTGTTTTCATCGTTCAAATGTACT
CAAACCGCAATTGATTGACTTTTGCATAATATCCACGCTAAATTTGATCC
TTGTTATCGTCAAAGAGTAAAGTTTGAGTAAATTTTCTTTACAGATTTCT
TTTCGCGAGCATAAACTTTCGCGAATTGCCCCCTCAAGAAATTTCAAAGA
CATTTACTTTCGCGAAAAGGGCTAGAATTCGCGAAAATCGCGAAAGTTTC
TGCTCACGAAAGTTTGTACGCCTAAAGTATTTCATGGAGATGCTGAAGTG
TTTTTTCTTTTGTAGGACCAGATTGGACTACCATACTTGGCCAACAACAA
TATCTGGAAGATTTGTTATACAAATACCAAGTGGATGTCGGTCTTTGGGC
TCACTATCACATTTACGAACGAACGTGTAAAGTATATCGCAACGAATGCC
GGGAGGACGGGATAACTCATTTGGTGGTCGGTACAGGAGGTGTGAACTTG
GAGATCAATAAATGGTTCACAAAGGAATGGTCTAAGGTACGTGACGCTGA
TTTTGGTTACGGTCGATTCTCGGTGACAAACTCCACTCACCTTTTGTTCG
AATTCGTGAAACTTAACACTGGGAAAGTTGGCGACTCGGTTTGGATCACC
AAATAATTTTTGATTAACTGATTTCTGACTACAGCGCCGTAGGAAGCATT
TTCATATTGGGGGGGCTGAAGTTTAGTGACACCGCGAGGGTCAACCATGG
TTTGGCCCGAGGGGGGAAATTTTAAAAATTGAGCTCTAGATTGCTTAAAA
ATACACTCAAAACATGCACATAAAAGACAATTATGACAAATTAAAAAAGA
AAAACTTTGCATTCATTTTGCAAAATAACCATTTTTGAAAAAATTATTGG
GGGGGCATAGCTACCCTCCCCTTGCCCC

Coding sequence (CDS) from alignment at sc0004531:12..6189-

>TCONS_00043752 ID=TCONS_00043752|Name=TCONS_00043752|organism=Clytia hemisphaerica|type=CDS|length=8967bp|location=Sequence derived from alignment at sc0004531:12..6189- (Clytia hemisphaerica)
GACCAGATTGGACTACCATACTTGGCCAACAACAATATCTGGAAGATTTG
TTATACAAATACCAAGTGGATGTCGGTCTTTGGGCTCACTATCACATTTA
CGAACGAACGTGTAAAGTATATCGCAACGAATGCCGGGAGGACGGGATAA
CTCATTTGGTGGTCGGTACAGGAGGTGTGAACTTGGAGATCAATAAATGG
TTCACAAAGGAATGGTCTAAGGTACGTGACGCTGATTTTGGTTACGGTCG
ATTCTCGGTGACAAACTCCACTCACCTTTTGTTCGAATTCGTGAAACTTA
ACACTGGGAAAGTTGGCGACTCGGTTTGGATCACCAAATAAGCATAGTTA
TAACGTTGGTTTCATTCACATGGTCTCCATCAGCTCTGAGCACGATTACC
GAGAAGGTTCACTACAATATAGATGGTTGGAAAATGATCTGAAGAATGTC
GATCGCACCAAAACACCTTTTGTGATCGTTAGCGCCCATCGACCGATGTA
TTGCAGTGAATATTACCCAGGCGTACCTGTGGGATCAATGGTTTCACGAG
ATTCAACCAATGTCCGCTTTGGCTCCATACATGATTAACCTGGGTAACCA
TGAGTACCAACACATCTATGCATTTGATAAAGACCCTTCTCACCAACCGA
TGTGGCATCCATCATGGTATAACGGAGGTCAAGGATCTTTCGGTGAATGT
GCTATTCCAATGGTTAATCGATTTCATATGCCTGATAACGGACTCGGTAT
ATTCTGATCTCGTACGCTCGTGGATATTTTATGACGTCAGTGTACAACTT
TACAACTGTGATCAAAGGAGGAGATAAGACTCCTTTCAAATTTATCGCTT
TTGGTGACATGGGAATCACCTCCCAAGCTGAAACAACCACCAAATCAGTT
CGCCAAGAGATCGAGAATAACGATGTGAAATTTGTTTACCATGCCGGAGA
CTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACAAAAGACCTTGACAA
AACACAAACGAAATATACCGTCAAAACTTACAAAGCTTCAGACATGTGCG
AATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGGTATATTTATGAT
GTTTTGTTGACTGACTTGGAACCCAACACGAGATATTATTACTCCTGTGG
TAGTAAAGAGTTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCG
ACATTTTTGCTCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACA
GAGATGAGAGTTATGTGGAATTCTGCTGAAGGACCAGATTGGACTACCAT
ACTTGGCCAACAACAATATCTGGAAGATTTGTTATACAAATACCAAGTGG
ATGTCGGTCTTTGGGCTCACTATCACATTTACGAACGAACGTGTAAAGTA
TATCGCAACGAATGCCGGGAGGACGGGATAACTCATTTGGTGGTCGGTAC
AGGAGGTGTGAACTTGGAGATCAATAAATGGTTCACAAAGGAATGGTCTA
AGGTACGTGACGCTGATTTTGGTTACGGTCGATTCTCGGTGACAAACTCC
ACTCACCTTTTGTTCGAATTCGTGAAACTTAACACTGGGAAAGTTGGCGA
CTCGGTTTGGATCACCAAATAAGCATAGTTATAACGTTGGTTTCATTCAC
ATGGTCTCCATCAGCTCTGAGCACGATTACCGAGAAGGTTCACTACAATA
TAGATGGTTGGAAAATGATCTGAAGAATGTCGATCGCACCAAAACACCTT
TTGTGATCGTTAGCGCCCATCGACCGATGTATTGCAGTGAATATTACCCA
GGCGTACCTGTGGGATCAATGGTTTCACGAGATTCAACCAATGTCCGCTT
TGGCTCCATACATGATTAACCTGGGTAACCATGAGTACCAACACATCTAT
GCATTTGATAAAGACCCTTCTCACCAACCGATGTGGCATCCATCATGGTA
TAACGGAGGTCAAGGATCTTTCGGTGAATGTGCTATTCCAATGGTTAATC
GATTTCATATGCCTGATAACGGACTCGGTATATTCTGATCTCGTACGCTC
GTGGATATTTTATGACGTCAGTGTACAACTTTACAACTGTGATCAAAGGA
GGAGATAAGACTCCTTTCAAATTTATCGCTTTTGGTGACATGGGAATCAC
CTCCCAAGCTGAAACAACCACCAAATCAGTTCGCCAAGAGATCGAGAATA
ACGATGTGAAATTTGTTTACCATGCCGGAGACTCTCTGAAGGCATCCAAG
TACGTTATGGTAAAACAAAAGACCTTGACAAAACACAAACGAAATATACC
GTCAAAACTTACAAAGCTTCAGACATGTGCGAATCGCCTGCTAACACAAC
TGGATTTTGGGATGCTGGGTATATTTATGATGTTTTGTTGACTGACTTGG
AACCCAACACGAGATATTATTACTCCTGTGGTAGTAAAGAGTTAGTTGCT
ATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGCTCCACTTCA
AGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAGTTATGTGGA
ATTCTGCTGAAGGACCAGATTGGACTACCATACTTGGCCAACAACAATAT
CTGGAAGATTTGTTATACAAATACCAAGTGGATGTCGGTCTTTGGGCTCA
CTATCACATTTACGAACGAACGTGTAAAGTATATCGCAACGAATGCCGGG
AGGACGGGATAACTCATTTGGTGGTCGGTACAGGAGGTGTGAACTTGGAG
ATCAATAAATGGTTCACAAAGGAATGGTCTAAGGTACGTGACGCTGATTT
TGGTTACGGTCGATTCTCGGTGACAAACTCCACTCACCTTTTGTTCGAAT
TCGTGAAACTTAACACTGGGAAAGTTGGCGACTCGGTTTGGATCACCAAA
TAAGCATAGTTATAACGTTGGTTTCATTCACATGGTCTCCATCAGCTCTG
AGCACGATTACCGAGAAGGTTCACTACAATATAGATGGTTGGAAAATGAT
CTGAAGAATGTCGATCGCACCAAAACACCTTTTGTGATCGTTAGCGCCCA
TCGACCGATGTATTGCAGTGAATATTACCCAGGCGTACCTGTGGGATCAA
TGGTTTCACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGATTAA
CCTGGGTAACCATGAGTACCAACACATCTATGCATTTGATAAAGACCCTT
CTCACCAACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGGATCT
TTCGGTGAATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTGATAA
CGGACTCGGTATATTCTGATCTCGTACGCTCGTGGATATTTTATGACGTC
AGTGTACAACTTTACAACTGTGATCAAAGGAGGAGATAAGACTCCTTTCA
AATTTATCGCTTTTGGTGACATGGGAATCACCTCCCAAGCTGAAACAACC
ACCAAATCAGTTCGCCAAGAGATCGAGAATAACGATGTGAAATTTGTTTA
CCATGCCGGAGACTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACAAA
AGACCTTGACAAAACACAAACGAAATATACCGTCAAAACTTACAAAGCTT
CAGACATGTGCGAATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGG
TATATTTATGATGTTTTGTTGACTGACTTGGAACCCAACACGAGATATTA
TTACTCCTGTGGTAGTAAAGAGTTAGTTGCTATTAGCAACAAAGTGAGGT
TTACAAATGGCGACATTTTTGCTCCACTTCAAGTCCACTTGGCGATGACT
GGAAAAGAAACAGAGATGAGAGTTATGTGGAATTCTGCTGAAGGACCAGA
TTGGACTACCATACTTGGCCAACAACAATATCTGGAAGATTTGTTATACA
AATACCAAGTGGATGTCGGTCTTTGGGCTCACTATCACATTTACGAACGA
ACGTGTAAAGTATATCGCAACGAATGCCGGGAGGACGGGATAACTCATTT
GGTGGTCGGTACAGGAGGTGTGAACTTGGAGATCAATAAATGGTTCACAA
AGGAATGGTCTAAGGTACGTGACGCTGATTTTGGTTACGGTCGATTCTCG
GTGACAAACTCCACTCACCTTTTGTTCGAATTCGTGAAACTTAACACTGG
GAAAGTTGGCGACTCGGTTTGGATCACCAAATAAGCATAGTTATAACGTT
GGTTTCATTCACATGGTCTCCATCAGCTCTGAGCACGATTACCGAGAAGG
TTCACTACAATATAGATGGTTGGAAAATGATCTGAAGAATGTCGATCGCA
CCAAAACACCTTTTGTGATCGTTAGCGCCCATCGACCGATGTATTGCAGT
GAATATTACCCAGGCGTACCTGTGGGATCAATGGTTTCACGAGATTCAAC
CAATGTCCGCTTTGGCTCCATACATGATTAACCTGGGTAACCATGAGTAC
CAACACATCTATGCATTTGATAAAGACCCTTCTCACCAACCGATGTGGCA
TCCATCATGGTATAACGGAGGTCAAGGATCTTTCGGTGAATGTGCTATTC
CAATGGTTAATCGATTTCATATGCCTGATAACGGACTCGGTATATTCTGA
TCTCGTACGCTCGTGGATATTTTATGACGTCAGTGTACAACTTTACAACT
GTGATCAAAGGAGGAGATAAGACTCCTTTCAAATTTATCGCTTTTGGTGA
CATGGGAATCACCTCCCAAGCTGAAACAACCACCAAATCAGTTCGCCAAG
AGATCGAGAATAACGATGTGAAATTTGTTTACCATGCCGGAGACTCTCTG
AAGGCATCCAAGTACGTTATGGTAAAACAAAAGACCTTGACAAAACACAA
ACGAAATATACCGTCAAAACTTACAAAGCTTCAGACATGTGCGAATCGCC
TGCTAACACAACTGGATTTTGGGATGCTGGGTATATTTATGATGTTTTGT
TGACTGACTTGGAACCCAACACGAGATATTATTACTCCTGTGGTAGTAAA
GAGTTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTT
TGCTCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGA
GAGTTATGTGGAATTCTGCTGAAGGACCAGATTGGACTACCATACTTGGC
CAACAACAATATCTGGAAGATTTGTTATACAAATACCAAGTGGATGTCGG
TCTTTGGGCTCACTATCACATTTACGAACGAACGTGTAAAGTATATCGCA
ACGAATGCCGGGAGGACGGGATAACTCATTTGGTGGTCGGTACAGGAGGT
GTGAACTTGGAGATCAATAAATGGTTCACAAAGGAATGGTCTAAGGTACG
TGACGCTGATTTTGGTTACGGTCGATTCTCGGTGACAAACTCCACTCACC
TTTTGTTCGAATTCGTGAAACTTAACACTGGGAAAGTTGGCGACTCGGTT
TGGATCACCAAATAAGCATAGTTATAACGTTGGTTTCATTCACATGGTCT
CCATCAGCTCTGAGCACGATTACCGAGAAGGTTCACTACAATATAGATGG
TTGGAAAATGATCTGAAGAATGTCGATCGCACCAAAACACCTTTTGTGAT
CGTTAGCGCCCATCGACCGATGTATTGCAGTGAATATTACCCAGGCGTAC
CTGTGGGATCAATGGTTTCACGAGATTCAACCAATGTCCGCTTTGGCTCC
ATACATGATTAACCTGGGTAACCATGAGTACCAACACATCTATGCATTTG
ATAAAGACCCTTCTCACCAACCGATGTGGCATCCATCATGGTATAACGGA
GGTCAAGGATCTTTCGGTGAATGTGCTATTCCAATGGTTAATCGATTTCA
TATGCCTGATAACGGACTCGGTATATTCTGATCTCGTACGCTCGTGGATA
TTTTATGACGTCAGTGTACAACTTTACAACTGTGATCAAAGGAGGAGATA
AGACTCCTTTCAAATTTATCGCTTTTGGTGACATGGGAATCACCTCCCAA
GCTGAAACAACCACCAAATCAGTTCGCCAAGAGATCGAGAATAACGATGT
GAAATTTGTTTACCATGCCGGAGACTCTCTGAAGGCATCCAAGTACGTTA
TGGTAAAACAAAAGACCTTGACAAAACACAAACGAAATATACCGTCAAAA
CTTACAAAGCTTCAGACATGTGCGAATCGCCTGCTAACACAACTGGATTT
TGGGATGCTGGGTATATTTATGATGTTTTGTTGACTGACTTGGAACCCAA
CACGAGATATTATTACTCCTGTGGTAGTAAAGAGTTAGTTGCTATTAGCA
ACAAAGTGAGGTTTACAAATGGCGACATTTTTGCTCCACTTCAAGTCCAC
TTGGCGATGACTGGAAAAGAAACAGAGATGAGAGTTATGTGGAATTCTGC
TGAAGGACCAGATTGGACTACCATACTTGGCCAACAACAATATCTGGAAG
ATTTGTTATACAAATACCAAGTGGATGTCGGTCTTTGGGCTCACTATCAC
ATTTACGAACGAACGTGTAAAGTATATCGCAACGAATGCCGGGAGGACGG
GATAACTCATTTGGTGGTCGGTACAGGAGGTGTGAACTTGGAGATCAATA
AATGGTTCACAAAGGAATGGTCTAAGGTACGTGACGCTGATTTTGGTTAC
GGTCGATTCTCGGTGACAAACTCCACTCACCTTTTGTTCGAATTCGTGAA
ACTTAACACTGGGAAAGTTGGCGACTCGGTTTGGATCACCAAATAAGCAT
AGTTATAACGTTGGTTTCATTCACATGGTCTCCATCAGCTCTGAGCACGA
TTACCGAGAAGGTTCACTACAATATAGATGGTTGGAAAATGATCTGAAGA
ATGTCGATCGCACCAAAACACCTTTTGTGATCGTTAGCGCCCATCGACCG
ATGTATTGCAGTGAATATTACCCAGGCGTACCTGTGGGATCAATGGTTTC
ACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGATTAACCTGGGT
AACCATGAGTACCAACACATCTATGCATTTGATAAAGACCCTTCTCACCA
ACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGGATCTTTCGGTG
AATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTGATAACGGACTC
GGTATATTCTGATCTCGTACGCTCGTGGATATTTTATGACGTCAGTGTAC
AACTTTACAACTGTGATCAAAGGAGGAGATAAGACTCCTTTCAAATTTAT
CGCTTTTGGTGACATGGGAATCACCTCCCAAGCTGAAACAACCACCAAAT
CAGTTCGCCAAGAGATCGAGAATAACGATGTGAAATTTGTTTACCATGCC
GGAGACTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACAAAAGACCTT
GACAAAACACAAACGAAATATACCGTCAAAACTTACAAAGCTTCAGACAT
GTGCGAATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGGTATATTT
ATGATGTTTTGTTGACTGACTTGGAACCCAACACGAGATATTATTACTCC
TGTGGTAGTAAAGAGTTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAA
TGGCGACATTTTTGCTCCACTTCAAGTCCACTTGGCGATGACTGGAAAAG
AAACAGAGATGAGAGTTATGTGGAATTCTGCTGAAGGACCAGATTGGACT
ACCATACTTGGCCAACAACAATATCTGGAAGATTTGTTATACAAATACCA
AGTGGATGTCGGTCTTTGGGCTCACTATCACATTTACGAACGAACGTGTA
AAGTATATCGCAACGAATGCCGGGAGGACGGGATAACTCATTTGGTGGTC
GGTACAGGAGGTGTGAACTTGGAGATCAATAAATGGTTCACAAAGGAATG
GTCTAAGGTACGTGACGCTGATTTTGGTTACGGTCGATTCTCGGTGACAA
ACTCCACTCACCTTTTGTTCGAATTCGTGAAACTTAACACTGGGAAAGTT
GGCGACTCGGTTTGGATCACCAAATAAGCATAGTTATAACGTTGGTTTCA
TTCACATGGTCTCCATCAGCTCTGAGCACGATTACCGAGAAGGTTCACTA
CAATATAGATGGTTGGAAAATGATCTGAAGAATGTCGATCGCACCAAAAC
ACCTTTTGTGATCGTTAGCGCCCATCGACCGATGTATTGCAGTGAATATT
ACCCAGGCGTACCTGTGGGATCAATGGTTTCACGAGATTCAACCAATGTC
CGCTTTGGCTCCATACATGATTAACCTGGGTAACCATGAGTACCAACACA
TCTATGCATTTGATAAAGACCCTTCTCACCAACCGATGTGGCATCCATCA
TGGTATAACGGAGGTCAAGGATCTTTCGGTGAATGTGCTATTCCAATGGT
TAATCGATTTCATATGCCTGATAACGGACTCGGTATATTCTGATCTCGTA
CGCTCGTGGATATTTTATGACGTCAGTGTACAACTTTACAACTGTGATCA
AAGGAGGAGATAAGACTCCTTTCAAATTTATCGCTTTTGGTGACATGGGA
ATCACCTCCCAAGCTGAAACAACCACCAAATCAGTTCGCCAAGAGATCGA
GAATAACGATGTGAAATTTGTTTACCATGCCGGAGACTCTCTGAAGGCAT
CCAAGTACGTTATGGTAAAACAAAAGACCTTGACAAAACACAAACGAAAT
ATACCGTCAAAACTTACAAAGCTTCAGACATGTGCGAATCGCCTGCTAAC
ACAACTGGATTTTGGGATGCTGGGTATATTTATGATGTTTTGTTGACTGA
CTTGGAACCCAACACGAGATATTATTACTCCTGTGGTAGTAAAGAGTTAG
TTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGCTCCA
CTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAGTTAT
GTGGAATTCTGCTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027430XLOC_027430Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043752-exon-sc0004531-1575043694:6069..6189TCONS_00043752-exon-sc0004531-1575043694:6069..6189Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1575043694:5213..5421TCONS_00043752-exon-sc0004531-1575043694:5213..5421Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1575043694:4571..4744TCONS_00043752-exon-sc0004531-1575043694:4571..4744Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1575043694:2519..2539TCONS_00043752-exon-sc0004531-1575043694:2519..2539Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1575043694:1968..2203TCONS_00043752-exon-sc0004531-1575043694:1968..2203Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1575043694:1210..1388TCONS_00043752-exon-sc0004531-1575043694:1210..1388Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1575043694:12..624TCONS_00043752-exon-sc0004531-1575043694:12..624Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:6069..6189TCONS_00043752-exon-sc0004531-1510915933:6069..6189Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:5213..5421TCONS_00043752-exon-sc0004531-1510915933:5213..5421Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:4571..4744TCONS_00043752-exon-sc0004531-1510915933:4571..4744Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:2519..2539TCONS_00043752-exon-sc0004531-1510915933:2519..2539Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:1968..2203TCONS_00043752-exon-sc0004531-1510915933:1968..2203Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:1210..1388TCONS_00043752-exon-sc0004531-1510915933:1210..1388Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1510915933:12..624TCONS_00043752-exon-sc0004531-1510915933:12..624Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:6069..6189TCONS_00043752-exon-sc0004531-1491911889:6069..6189Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:5213..5421TCONS_00043752-exon-sc0004531-1491911889:5213..5421Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:4571..4744TCONS_00043752-exon-sc0004531-1491911889:4571..4744Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:2519..2539TCONS_00043752-exon-sc0004531-1491911889:2519..2539Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:1968..2203TCONS_00043752-exon-sc0004531-1491911889:1968..2203Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:1210..1388TCONS_00043752-exon-sc0004531-1491911889:1210..1388Clytia hemisphaericaexon
TCONS_00043752-exon-sc0004531-1491911889:12..624TCONS_00043752-exon-sc0004531-1491911889:12..624Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043752-proteinTCONS_00043752-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004531supercontigsc0004531:12..6189 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.2531	12.2405	4.81415	0.622813	136.659	109.303	54.9422	57.8374	49.9214	41.746	39.5313	41.3409	23.9546	28.3252	41.467	32.7765	34.8036	56.3813	58.263	86.1241	17.8289	16.5385	18.5057	30.4706	30.8489	29.7902	41.1173	51.7282	43.007	43.6234
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like
IPR025733Purple_acid_PPase_C_dom
IPR015914Purple_acid_Pase_N
IPR004843Calcineurin-like_PHP_ApaH
IPR008963Purple_acid_Pase-like_N
Vocabulary: Molecular Function
TermDefinition
GO:0003993acid phosphatase activity
GO:0046872metal ion binding
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
Blast
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BLAST of TCONS_00043752 vs. Swiss-Prot (Human)
Match: ACP7 (Acid phosphatase type 7 OS=Homo sapiens GN=ACP7 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.779e-41
Identity = 110/370 (29.73%), Postives = 172/370 (46.49%), Query Frame = 1 
Query:  259 YIYDVLLTDLEPNTRYYYSCGSKEFMTSVYNFTTVIKGGDKTPFKFIAFGDMGITSQAETTTKSVRQEIENNDVKFVYHAGDISYA--RGYAYLWDQWFHEIQPMSALAPYMINLGNHEYQHIYAFDKDPSHQPMWHPSWYNGGQGSFGECAIPMVNRFHMPDNGLGIFWHSYNVGFIHMVSISSE------HDYREGSLQYRWLENDLK--NVDRTKTPFVIVSAHRPMYCSE-------YYPGPDWTTILGQQQYLEDLLYKYQVDVGLWAHYHIYERTCKVYR----NECRE------DGITHLVVGTGGVNLEINKW--FTKEWSKVRDADFGYGRFSVTNSTHLLFEFVKLNT-GKVGDSVWITK 1278
            YI+ V L  L P  +Y Y CGS +  +  + F  +  G   +P +   FGD+G  +        +R++ +      V H GD +Y   +  A + D++   I+P++A  PYM   GNHE ++ ++  K                             RF MP +  G+ W+S+++G  H++S S+E      +       Q+RWLE+DL+  N +R   P++I   HRPMYCS         +       + G+   LEDL YKY VD+ LWAH H YER   +Y     N  RE       G  H++ G+ G    +  +  F + WS VR  ++GY R  + N TH+  + V  +  GK+ D VW+ +
Sbjct:   92 YIHRVTLRKLLPGVQYVYRCGSAQGWSRRFRFRALKNGAHWSP-RLAVFGDLG--ADNPKAVPRLRRDTQQGMYDAVLHVGDFAYNLDQDNARVGDRFMRLIEPVAASLPYMTCPGNHEERYNFSNYK----------------------------ARFSMPGDNEGL-WYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNADLDDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVFNGSREMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILNGTHIHIQQVSDDQDGKIVDDVWVVR 429
The following BLAST results are available for this feature:
BLAST of TCONS_00043752 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACP72.779e-4129.73Acid phosphatase type 7 OS=Homo sapiens GN=ACP7 PE... [more]
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