XLOC_002371 (gene) - C. hemisphaerica

Overview
NameXLOC_002371
Unique NameXLOC_002371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:228493..234607-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002371 ID=XLOC_002371|Name=XLOC_002371|organism=Clytia hemisphaerica|type=gene|length=6115bp|location=Sequence derived from alignment at sc0000041:228493..234607- (Clytia hemisphaerica)
AAGATATTTTTCGATAACATTCGTGACGGTATGTTTGTGTTTATTGAGAT TCTTACAGTGGTCTGACTGATTCAATGCGTGTGTACTGTACTTACCTATA ATAATCCAAAATTTCCCTTAACATTCAAAAGCGCCGAAATCGCAAAAATT CGGATAGTACTGGGGTGCTGCATTTGAAAATAAGATAAAACCAAGCTGGC AAATCAAACATTATTTTATTAGTATACTGCAGTAGCGTAGCCAAGAGGGG CGCAGAATTTTTATGCCATTATAATTATCTTTTAAATATCATGAATAGAT AATTAGTGTCATAAAAATCTGCTTTCCTACACAAATTTTGCGCCCCTCTG TTGTCTACGCTACTGAGTACATATGAGTATTTTCCAAACCATTTTCTAGA CGTTCATTCTTCAGAGTATTCAGTAATTTGTATCTTCCGTAGAAAAGTTT TCATTCGATTTTTAAAGGAAGTTTTGGATTGTTATAGGTAGTAGGGTACA CATGCATTTTTTTACGTATCTCCGTTCAATGCTTTCCACTTTCGTTTAGA CCAAGAACATAATTTTGAGAAACAGACGGAAAAGAAAGCAGACACTTTGA ACATTCAGTATGATTTCTCCAGCGTGATGCATTATGGGAAATTTTCATTC GCTCAAGATCGTGAGTTCCTTCTTCTTGCTTTTTCATCCTTTTTTACTTT TCCACAATGTTTGAATACTTTTATGACTCAGAGGCTTTTCGTCTACTTCA TTTTTTCGAACATTTCTCCTTCTTCCAGCTTCAAAGCCTACCATCCTCCC GATACAGAACCCGAATCAAGAAATCGGGCAACGAGATGCTGTCTCTGACA CCGATATCGAACAAATCAATATCTTGTACAGTTGCTCAGGTATCGATATG ATTCTGTTACGAGAGGACGATTCCTAAACCAGTGTTGTGAAACACAGAGT GTCTTGCTTCTGATAATATTAGCGAGTTTATGTATTTGCACTTTGAGGAC GGTAGTGACTGAAGCGATTTGGAATAGCCTGCAGTTTTAACCCGCAAGAT TGAGGACAGTAAAAGTGCTGATTTACTGTCGTCCTCAGCTGGTCAGGGTT TAGGTCAAATTAGAACCTTACCGTCTCTGTTCAAGAAAAACACGCATACA TAAACTCGGTAATATCTCGGGAGCATTTTCTTAACTTCATAATCATTTGG GCCAAGTTCTTTTGATGATGAATATGATTTTTATCCACAGTTTCTGGAAA TGGTTGGAGCAAATGGTCAGAATATGGAGCATGTAGTGTAGACTGCATCA AACAACGATCACGTTTTTGCATGAATTCGGACAAAGCAAGCTGTCCGAAC CCAACTAATTATGGTTACAACAGATATGGAGTTGACCTTCAAGAAACAAA ATGCACGTCTAACGAATGTGCAGGTACAGTCTATCAAACACTTCTTTACT GTTCATAGGTTATATGTTTGCTTTCAATTTTCAGGATTTTTCACGAAACT CCAGGTTTTTCAAAGGAAAATGAAAGATTACGATACTGTTCGAAGGTCCA TTTCTAAATTTTACGGTTGCTTTCTCAATTTGCATCAAAAACTCATTTTT AGGAGTGATTGATGGAAATTGGGGTTCCTGGGGAGATTGGGGCGAGTGTA GTGAAGCATGTGGAACGGGGAAACATTCCAGAACAAGACAATGTAATAAT CCAACTCCTCAAAATGACGGACAAAGCTGTAAAGGTTCGGCAAGTGAAGA AAAGGAATGTTTTATCAAACCTTGCAACTCAGGTATGACCCGGTTTCTTG CCTCTACTTTAAAAATAAAGATTTTCGAAAGAATCTCGATTCGAACCCAA CTTGGTTTATGTTTGTCTGCAAAAAAACGGTAATTTGAAAATTCACTGGT GTACTACGCCACGCCTTACGTGCACTTTAGTACAAAACAAATTTATGTAA AATACTCACAAGCGCCAAAGAAGGTGCAGAAAGACACGTTTCTGCGTCAA AACTTCAAAATCTAAAAAATTAATACTAAGTCTCAAACTAATTTCTTACA GGTTCGCTTGATTGCACTTTTGACGACGATTCAGACCGTCTTTGTGGATG GACATCTGAAGATTCAATGAACTTTCAATGGACGCGTAACCGAGGAGGTA CTCCTTCCACCAGCACTGGTCCTTCAGAAGATAAAACCTCTGGAAGTGGT ATGAAAATAGTCCACGTACCATTTGTCTTTTTCTGTACAATTAATTACAA TCTTAAGGTAATTTTCTAAACACCCCTGTGTCATAGACCCGCTGGGACAC CAGCCTTACTTGTGGTTTGGCAAAAAATTCGTTCCCGGTGGGTTTCAACC CCCACTGAGAAATTCACTTTAATTTCATCCCCACTCGAAATTCAATTTAA AAATTGCACTCCAAAACCATTCCCACTGGATTGTTTAACCTTGGAACAAC AGAATTTCTATCCCCTTTGGAATTTCAACATGAATCTTTATCCCCACTGA GGAAAACAGCCCCATCGGGGCTGTGAGGCAGGTGTGTTTTTAACGTTCTA ATGTTTAATGCTTCCAAAAGAATATGCATAGAGTAGATAGCAGTCATTTT ATTTTAAGATCTGGTAGGGTGATTTAGGGTTAAAAATTTAAAGATAGCAC CCCAATTTCTCACAAGAACCTACTGGTGTTAGGAAAAGATAACATTGCTA ACAACCTCTTTTGCAGGGTATTACATGTACATCGAGACATCTTCGCCAGC GAGAGAAGGATGGAAGGCTCGATTAACCAGTTCACTCATTGGTGCACAAG TTGTCAAATGTATAAAGCTCTCATACCATATGTATGGAGCAAGTATCGGT AAGTGAATCAAAACTTTCTACGAAATTTTAGGTATAAAACAGAATGGCCA CGAATGGTTGTTTAAGATCTCTTCATTACTATGCTGGTAGATAGTAACTT TTGAAGCCTTCGGATATTCTTTACTTTTTGAGTTTTAAGCCTAAGAATGT TCTTAAGATGTTCTTATTTTCCCCATTTTATGAGTACTTTTTGTCCATTT TACTATTTTACTAAGAAATCGGGTGTTTTAGAGCCCCCAAAGCCTTAAAA TGTTCTTAACTTGTTCTTAACATTTTGTCATTGAAACTTTATGTTCTTAT ATAGTTTGTTCTTATAAAAAACGTGATATTCTGTTGCATTTTCTAACCAC AGCATCCTCAGAGATCACGAATATTACGTCCTTTAATCACTCTTTTTTCC AGCCTCAGTATAATCGAAACTTGTATGTTTTCAGGAACTTTGAATATCAT TGCAAAGGACCAAACAACAAACGAGGAACACATCCTTTTCGAGAAGTCTG GTAACCAAGGGAACACGTGGCAAACAATAGAAGTGACTGTTCAAAACTCT AATCCTTATAAGGTTTGTTGTTTAATAATTTGTAAAATCATGTATGTTCT CCCTCATAAACACACCTTTCTCCTTAAAACTGCAAACTTAAATGATATTG TCAATGGTCTCGACGAGATAAGTGGATGCCACAGAGCGTCGAACTGCTTC CAAGTATTCCAAGTATATTCTGATTCGACTCGGCTAACCATGAGTTAAAC AGAATGAGCCAGATGTTTGTTAGTTCTTGCGGGGGGGGCTACTACTCTTA CTAACCGACAGTGGTAATCGGCTGAGGTTCGAAAATGGACCCTACGTGAG ACTGAAAATTCTGGAATCATAAGTTTCATGACTTTTCTCTCATTAGATTG TGTTGGAAGGTGTGAGAGGATTTGATTGGCAAGGTGACATCGCAATTGAT GATATTGAGTTCACAAATGGAGCTTGTATCAGTAAGCATTTCTTTCTTTA TCTTTGTGCTTTACTAAGTAATGTTCAAACAGGCTCCATTGTACAAACTT GTGAATAAAGTCAAGGGTTAATCNGTTGAGTTCACAAATGGAGCTTGCAT CAGTAAGCATTTCTTTCTTTATCTTTGTGCTTTACTAAGTAATGTTCAAA CAGGCTCCATTGTACAAACTTGTGAATAAAGTCAAGGGTTAATCAATTGA TCAAACTATTTCAATACGCTTGGATTATGTCAAAACCTTGTACAATCTGT GAATCGAAAAGATTTCACCAATCCAGAACATTGAATAATCATAGCATTAA GCATATTTGAGTCTACAAAAAGCTGATCTTCAAAGCTTTTGAAAAATATT AAAAGTACCGTGCACAGTCAGTTTTTTTCTTGTTGACGAGGGCCTGTGTT AAAGCTTTTTTGAGCTAGTTTTACTGTAGGACAACTTGAATAAGCACACC ACCTTTTCGTTTCAGAACAAGTGGTGACCACGCCTTCTCCCACGCCCACA ATCCTTCGCGTTGGATGTTTCCAAGATCAAGGCTACATCAACGGTCGCCG GCCGTTCACCCATCGTGGAGATTTAAGTGGTTTAGCCATCTCCACCAATC AGCTTTCGGAGCTTCGCGATCATTATTATGACGTAGTTAGGTATTGTGGA TCGTTAGCAAGGAATAATGGCTTCAAGGTATAATTTAATACTTCAATTTA TCCCAAGTTCTTTAATTTCAACAGATTTTGAATATTCAAGTTTTTTGTCA TTGCTGCGTGTTTCAATTGTCTTTGAAGTTCATTCTATGGATCCCAAGGA TTCTGCTCATCCTCAAGCGAAAGGAGTTTCTTATATAGGAAATACTAGAT GGTTCCCATCGTCGCAAACGCCGGTTAACGGTTTTGCTTGCACATCAAAA GCCTTTAAAATACTATAATGTGGGTTAATGCCTGACATCGTTTTGGCTTA AAATGCCGAAAACAATAATATAAAATTATACTTCTAAACTTTCTACATTA GTCAAAATTTTGTGTCTGTAAGCCTCGATGATATGTCTTTTTAAGATAAC CGAAGTTTGTGTTCAATGAAATGCCATAGTGACCCTGTCAAAATTATGGA GGGTACCCGTCGTTACAGACGCCCAAAGGTGTCTGAGGTGGTGAGAGGGT TGCTTCTAGGAAAGAAAAAGCCTTAGTTGTGAAGGAGAGGCTCGCGCTTT GCGATTGAGCACTGAAGGGTTTCCCGTTTGTTGGGTTCACATGCGGACAG CTTAAGACCGGCGCATATGCAATGCAACCAACATTGAAACCTTTTTAAAT AATGTTAGACAAAGTTTAATCATCAAACAACAATGTTGGATTTTGTTGCT TGTGTTGATATAGAATAATTCGAAATCGTGCAACAAAAATTTCACACCTT TTTATTTGAAACTTTGTGACGTCGCAGTACTTTTTCATGAAATTGAGGTC AGAACTTTTTTCGTTTACCAGTAGTGGCAAATTTTATACAACTTTTGTCT ACATTACGTCATGAATATCATGAATAGATATATAATATTATAGACTCATA CTCTGTGGATCCAGTTTGAAAATGCTCTCACCGATCTCCTTTTTTTCAGT TTTTCGCCATCCAGCAATATTATGAATGTTGGACAGGACCGACTTTCGAT GTTCAGTACAGTCGAGATGGAGAAAGTAAGGGTTGCTGGCCCGAACAACA AATGGGGTACGGCCCTCATATCGTCGGCCAATATTTGTCGAATATGGTGT ACCAGTGGAGTGATTTGTAATAATTTTTCCCAAGCTGACTATATTGAATA AGCTGTTCTATGCGCACCAAAATATGTGGTGTCAGATGAAACAGCAGAAA ATATGAGATACAATTGATGCTATAAGAAACATTAAGAAGAAGACATTGTG CATCTTGTTGATGGCTGGTGGCTTGATTGGCTGTAATCATAAACTGGTAT ACCAATGGTTATCTCTATAACACTATTCTTTCACTAGAATTTGAGCATCG TTGTACATTATTTTGAGGGGAAAATTCACAAAAATAATGCTCGTACACTT TTTTTCATAACTCTGAAATTAAANGAAATTTTTATCGTTTTTTTTTGTTT TTTTTCTACATGAGGGCACGCAACCCTCGAAAAAGGTCAAATCCTCGATA TGCTTGTTAGCAAAAAATCGTTTTCCTCAAAATTTTCTTCACAAATTTAC AAACTTGGAAGAGGTATTGGAAAAATTTTTATCTAAAGTGATCGCTTATT GTTAAAAGCTTTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004270TCONS_00004270Clytia hemisphaericatranscript
TCONS_00004269TCONS_00004269Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004270-proteinTCONS_00004270-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:228493..234607 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.06 1.83 1.52 1.75 5.49 3.74 22.24 22.63 17.16 16.37 25.06 16.1 32.2 34.92 24.57 30.28 17.98 21.37 20.32 16.18 43.87 44.78 5.56 6.76 10.69 6.73 2.93 3.57 13.45 20.57