XLOC_001729 (gene) - C. hemisphaerica

Overview
NameXLOC_001729
Unique NameXLOC_001729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:669386..673304+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001729 ID=XLOC_001729|Name=XLOC_001729|organism=Clytia hemisphaerica|type=gene|length=3919bp|location=Sequence derived from alignment at sc0000025:669386..673304+ (Clytia hemisphaerica)
NNGTTGAAGTTATTGTTGGTTGCTTCTCTCATAATGGGCATCAGTTGGTT CACAGATTCCATTAATTGTATTGTACCCGGTAAGTTTTTGTATGGTTGTA TTTTACTTGGCTTTGTGAATTAAATCGTTCCGTTCTATTAAGGGTTCATG CAGACCCCTGTAAATTCTGGAAAAATTCCTGAAGATTGATTGCTTTAAAG TCAAGGAAACCAATGAActttaatgaaatgaaaagtttcttGGGGAAACg cagatcatatttttcatgtcttATATTAAAATACTATAGCTTGTATTTTT GGATCTGCAGGACCAGGCAGGACTGTTTCTAAAAGAAATTTAGCCTATAG GGTCAAATATGGTGGTAATCAGAGTTTCTATTACTATATTTGACAATCGA ATCTCGATCGATCCAATGCCAGTCggttgcgttcaattttgttcgaatat cgatttggttcgattagCATCGTCTAGTTTGGCTTCCGactattttattt tgattaaatttacTTAATTCCCCAGACAACCATAAAATTGATGGTGGATT TGTCTCCGCCACATGTTGGATTCAAGGATTTTACATTTTCACTGATCTAT GGAATCGAACTGATGAGACTTCATATTATGGTGTCACCAAAGATATCAAC ATGGATGGCCGGTTATCTACCGGCGAACTGTGCCCCATGAATCCCAAGCT TAGACGACATGTTGTCGAAGGGTGTGAACCAATGGAAAAGACATTCTTTC TTCaggtaattatctattcattcCCATGGCACTGGCCATGCGAAGTGACG GGTTTGTCCGAACTGAATATATAAAATTTACCCTTAGAGAGCAAATTTCG TCGGCTCAGAGCCGTTCAGAGAATGGATCTTTTGTAGTTGCAAGTGTTTT TTTGTAACCCTAAAATATATGTCAAGTGTGAAAAGGGTACCCCTATCTCT TGAACATATCCGGGCCTACCTTGCCTTAGTACCCCGACCTCATGATTGGC CCCTGCTATGCTAGAGTTTATCTATTGAAAATGTTTATCATTCTCACTAA GGTAGAAGTTGTTCAAGTAGATAGATTGCCGACCCAAGCACCCTTTCTCG TTGACTTGACTATCTATAAAAAAGTATTCCTTCCTATATTGAATTTCTTC CCTAGAAAAACCCAGGTCTGCTTTGACACTGATTCTCCTCTGTTTATAGT ACCATTACATGCCTTTCTTGGTTGCTGCCATGATCATTCCATACTATATC CCATACATTATCCATCGAACTGTGAATCGAGATCTCATTAATCTGAAGAA TGCCATCAAAGAAGATGACGTAGACGCTGATCGACTCACCAAATATTTCT TCAGTGTTTTTCGACACCCAACTCTCAAGTATGTGGCTATTTTAACTGAt cgttttttatataataagATAGGCAGACTCACTCCTGAAGCATTCTATAC AGTTTTCCATGGAATCAATCGACTCTGGATAAGATAGTTGTCAGGATTTC CCTCTCCATTAACATGAGAACCCCATGTCAATAAAATTTGAACAATCCAA TATCTTGTATTGGAGTGTTACGAGAGTTTAGCAAATCTTCCAATCTCCTT GCTTATGCGTGCAAGATCGTAAGATCATAATTTTGGTGAGTTTCGGCGAG ACTCCCTTTTTTCTTCCTCTTAAAATTAGTTAATTGGTTAATATAAGTTA ATATTGTTCTAACTTTCAACAGGTCATGTTGGCTTGTCATCTGCAAcatt atcatcaaaatacttTACATAGCTGTCAACGTTGGTGTCTTCCTTTGTCT TGATTATATCCTCAATAACAAGTTCCGTTACTATGGTAATGATTGGCTTG AGTGgggtaaactcgataacccagtTCAGCACGACTATACGTCTAGACTA CGGAACTTTCCAACGCCGGGAAATCAGCTGTTACCGTCTTTTGGATATTG TGAGGTTGCAAACTCTGCAAAAGATATCAAAGAATCAACTGGCAACTACC ATAAGGTTCGTCATgtcattttttaagaaattactGTTAAGCTTTTTGTG AGTGTTCAAaagacatccctgtctcacagccccgttggACTCTTTTCCTT AGTGGGGATGAGAATTCCGAtggaaatcccaatggggatagaaattctat tgttccaaggatgaaaaatccagtggggatggttttggagtccaatTTTT AGACGAGTggtgatgaaatcaaagtcaatttccctgttggactgaaattc cagggtattttcccaccggggacgaaatttttaccAATTTGTTTGAAAGC GGACAACCTGTACGGAAAGAAAGGCTGCGAAATGCTTTCCCTTCCTTGTA TCTTTAATTCTTTTCAGAGCAAAAATATCTGTCGTCTTTGGCTAAAATTC TATCTTTGTTCATGGATTAACGGAAATTTGATATGTATAACACTACTCTT ACACTGCGTTTATTATGTTGGTATTATGTTGAATCATTTCTATGTTACAG GTTGTTTGTGAGATATCGCAGCACGTATTATACCAATACACATTACTGGT ATTATGGGTTGCCATATTATGTGGGATCATAATATCAGTTCTCGGTTTGG TCTTCATGATCTTGTACTATCTCTTCCATATTTGCATCAGGTagaatttt catttctttcaaacaaaagaGCAGATTTCCTTTTGATGGATGAAAGTTTC AGTAACATATTCTGTCttctttggggggggggttcccAGCTTCATTATCT ATTTGCCAGAATCTCAACTACCAACCAAATCAATTTTCGATTCTTTCCGG AGGAAGGGGAGAGTGCCACTCTGGGGCCACTCTCTTCTCCCACTTTTGCT CCATTTATCCTTGATCCATCTCTTAAATGCTAAGCATCTAGCAGAGAGAC ATCAAGTAACATTTAACAAGTTTTCGGTGTGACTTTGATATATTTATATA GATTACAACTCAAAAAAGTTTCCTCTTTTCAAAACTATGTTTGTGCATAC TAAGTTGATTCTGTTGCCAAAGAAATACTTTATTTAATCTTTCAACCAAC AATATAGAATCatcgaaaattctttttttcgttAGTCACAGTTTTCAATT ACTTAATTGGTCAACCTTCTTGTTTTCAGAGCACGATTCAGATCACCTCG TGGTGTTCGTAAAGGTCTTTGTATGCGAGAATTGGAATATTTGGATTTCA TTCACCGAAAGAACGTCATGTTGTATGGAGATGTCATCGAAAAATTGCGA AGAATTTAAAATGAATCACcagagagaaattttttaagaatttagaATTA CAAGATTTTTCGCTAAAATCTCTGAATATCAATTAATGTAAATTAACATA ATAATGGTCTTGACACAAAGCTGGATGGATAAATTGTGAGAAGAAGATGT CCAGAGTAAATGCATGCATGATACGAAGCATCAGAAGCTTCAACAAATGT TACTTGTCGAAATAAAGATATTGCCCACAATGtatttgaattgatttgaa acaCGGTCATACTACAGAATAGGCCATTCCACGGTCGGGATGAATCATGG GTTAACAGGGCTGGAAAACTCAAAACCTACAAGGTTTTAGGTCAACAGAA CGCCGTTTTTAGAACGCGAAGGTCCTGATTATTTATGATGCATTTCTTCC GTGAAACTGCATCTTACCAATGAGACATTATCGGGTGTTCAACTCAAAAA CAgaatttgttaaatttcaaaaagattatcttaaaaattgaattttttag tTTGTAAATATGTCACTTTAAACTTCATGGAtggaaaaggtttttttata aatttcaatATCAGAATTTTTTGAGCTTATATCCATATGCAAATTAATTT TTGTTGTCTGGTCCGGGCAGTTACTTGCTGATAGCCTTCAGTAGTCATTC TTACACTGATAAACCCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003109TCONS_00003109Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003109-proteinTCONS_00003109-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:669386..673304 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.78 0.86 0.62 0.24 0.67 0.79 14.92 16.34 15.05 11.22 10.48 9.76 24.62 24.68 35.07 27.57 20.97 18.48 15.47 14.89 15.1 13.42 15.84 20.03 23.69 26.27 11.22 9.88 2.53 2.31