TCONS_00003109 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003109
Unique NameTCONS_00003109
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1701

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003109 ID=TCONS_00003109|Name=TCONS_00003109|organism=Clytia hemisphaerica|type=transcript|length=1701bp
NNGTTGAAGTTATTGTTGGTTGCTTCTCTCATAATGGGCATCAGTTGGTT
CACAGATTCCATTAATTGTATTGTACCCGACAACCATAAAATTGATGGTG
GATTTGTCTCCGCCACATGTTGGATTCAAGGATTTTACATTTTCACTGAT
CTATGGAATCGAACTGATGAGACTTCATATTATGGTGTCACCAAAGATAT
CAACATGGATGGCCGGTTATCTACCGGCGAACTGTGCCCCATGAATCCCA
AGCTTAGACGACATGTTGTCGAAGGGTGTGAACCAATGGAAAAGACATTC
TTTCTTCagTACCATTACATGCCTTTCTTGGTTGCTGCCATGATCATTCC
ATACTATATCCCATACATTATCCATCGAACTGTGAATCGAGATCTCATTA
ATCTGAAGAATGCCATCAAAGAAGATGACGTAGACGCTGATCGACTCACC
AAATATTTCTTCAGTGTTTTTCGACACCCAACTCTCAAGTCATGTTGGCT
TGTCATCTGCAAcattatcatcaaaatacttTACATAGCTGTCAACGTTG
GTGTCTTCCTTTGTCTTGATTATATCCTCAATAACAAGTTCCGTTACTAT
GGTAATGATTGGCTTGAGTGgggtaaactcgataacccagtTCAGCACGA
CTATACGTCTAGACTACGGAACTTTCCAACGCCGGGAAATCAGCTGTTAC
CGTCTTTTGGATATTGTGAGGTTGCAAACTCTGCAAAAGATATCAAAGAA
TCAACTGGCAACTACCATAAGGTTGTTTGTGAGATATCGCAGCACGTATT
ATACCAATACACATTACTGGTATTATGGGTTGCCATATTATGTGGGATCA
TAATATCAGTTCTCGGTTTGGTCTTCATGATCTTGTACTATCTCTTCCAT
ATTTGCATCAGAGCACGATTCAGATCACCTCGTGGTGTTCGTAAAGGTCT
TTGTATGCGAGAATTGGAATATTTGGATTTCATTCACCGAAAGAACGTCA
TGTTGTATGGAGATGTCATCGAAAAATTGCGAAGAATTTAAAATGAATCA
CcagagagaaattttttaagaatttagaATTACAAGATTTTTCGCTAAAA
TCTCTGAATATCAATTAATGTAAATTAACATAATAATGGTCTTGACACAA
AGCTGGATGGATAAATTGTGAGAAGAAGATGTCCAGAGTAAATGCATGCA
TGATACGAAGCATCAGAAGCTTCAACAAATGTTACTTGTCGAAATAAAGA
TATTGCCCACAATGtatttgaattgatttgaaacaCGGTCATACTACAGA
ATAGGCCATTCCACGGTCGGGATGAATCATGGGTTAACAGGGCTGGAAAA
CTCAAAACCTACAAGGTTTTAGGTCAACAGAACGCCGTTTTTAGAACGCG
AAGGTCCTGATTATTTATGATGCATTTCTTCCGTGAAACTGCATCTTACC
AATGAGACATTATCGGGTGTTCAACTCAAAAACAgaatttgttaaatttc
aaaaagattatcttaaaaattgaattttttagtTTGTAAATATGTCACTT
TAAACTTCATGGAtggaaaaggtttttttataaatttcaatATCAGAATT
TTTTGAGCTTATATCCATATGCAAATTAATTTTTGTTGTCTGGTCCGGGC
AGTTACTTGCTGATAGCCTTCAGTAGTCATTCTTACACTGATAAACCCCA
G
Run BLAST on NCBI

protein sequence of TCONS_00003109-protein

>TCONS_00003109-protein ID=TCONS_00003109-protein|Name=TCONS_00003109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
XLKLLLVASLIMGISWFTDSINCIVPDNHKIDGGFVSATCWIQGFYIFTD
LWNRTDETSYYGVTKDINMDGRLSTGELCPMNPKLRRHVVEGCEPMEKTF
FLQYHYMPFLVAAMIIPYYIPYIIHRTVNRDLINLKNAIKEDDVDADRLT
KYFFSVFRHPTLKSCWLVICNIIIKILYIAVNVGVFLCLDYILNNKFRYY
GNDWLEWGKLDNPVQHDYTSRLRNFPTPGNQLLPSFGYCEVANSAKDIKE
STGNYHKVVCEISQHVLYQYTLLVLWVAILCGIIISVLGLVFMILYYLFH
ICIRARFRSPRGVRKGLCMRELEYLDFIHRKNVMLYGDVIEKLRRI
Run BLAST on NCBI

transcript from alignment at sc0000025:669386..673304+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003109 ID=TCONS_00003109|Name=TCONS_00003109|organism=Clytia hemisphaerica|type=transcript|length=3919bp|location=Sequence derived from alignment at sc0000025:669386..673304+ (Clytia hemisphaerica)
NNGTTGAAGTTATTGTTGGTTGCTTCTCTCATAATGGGCATCAGTTGGTT CACAGATTCCATTAATTGTATTGTACCCGGTAAGTTTTTGTATGGTTGTA TTTTACTTGGCTTTGTGAATTAAATCGTTCCGTTCTATTAAGGGTTCATG CAGACCCCTGTAAATTCTGGAAAAATTCCTGAAGATTGATTGCTTTAAAG TCAAGGAAACCAATGAActttaatgaaatgaaaagtttcttGGGGAAACg cagatcatatttttcatgtcttATATTAAAATACTATAGCTTGTATTTTT GGATCTGCAGGACCAGGCAGGACTGTTTCTAAAAGAAATTTAGCCTATAG GGTCAAATATGGTGGTAATCAGAGTTTCTATTACTATATTTGACAATCGA ATCTCGATCGATCCAATGCCAGTCggttgcgttcaattttgttcgaatat cgatttggttcgattagCATCGTCTAGTTTGGCTTCCGactattttattt tgattaaatttacTTAATTCCCCAGACAACCATAAAATTGATGGTGGATT TGTCTCCGCCACATGTTGGATTCAAGGATTTTACATTTTCACTGATCTAT GGAATCGAACTGATGAGACTTCATATTATGGTGTCACCAAAGATATCAAC ATGGATGGCCGGTTATCTACCGGCGAACTGTGCCCCATGAATCCCAAGCT TAGACGACATGTTGTCGAAGGGTGTGAACCAATGGAAAAGACATTCTTTC TTCaggtaattatctattcattcCCATGGCACTGGCCATGCGAAGTGACG GGTTTGTCCGAACTGAATATATAAAATTTACCCTTAGAGAGCAAATTTCG TCGGCTCAGAGCCGTTCAGAGAATGGATCTTTTGTAGTTGCAAGTGTTTT TTTGTAACCCTAAAATATATGTCAAGTGTGAAAAGGGTACCCCTATCTCT TGAACATATCCGGGCCTACCTTGCCTTAGTACCCCGACCTCATGATTGGC CCCTGCTATGCTAGAGTTTATCTATTGAAAATGTTTATCATTCTCACTAA GGTAGAAGTTGTTCAAGTAGATAGATTGCCGACCCAAGCACCCTTTCTCG TTGACTTGACTATCTATAAAAAAGTATTCCTTCCTATATTGAATTTCTTC CCTAGAAAAACCCAGGTCTGCTTTGACACTGATTCTCCTCTGTTTATAGT ACCATTACATGCCTTTCTTGGTTGCTGCCATGATCATTCCATACTATATC CCATACATTATCCATCGAACTGTGAATCGAGATCTCATTAATCTGAAGAA TGCCATCAAAGAAGATGACGTAGACGCTGATCGACTCACCAAATATTTCT TCAGTGTTTTTCGACACCCAACTCTCAAGTATGTGGCTATTTTAACTGAt cgttttttatataataagATAGGCAGACTCACTCCTGAAGCATTCTATAC AGTTTTCCATGGAATCAATCGACTCTGGATAAGATAGTTGTCAGGATTTC CCTCTCCATTAACATGAGAACCCCATGTCAATAAAATTTGAACAATCCAA TATCTTGTATTGGAGTGTTACGAGAGTTTAGCAAATCTTCCAATCTCCTT GCTTATGCGTGCAAGATCGTAAGATCATAATTTTGGTGAGTTTCGGCGAG ACTCCCTTTTTTCTTCCTCTTAAAATTAGTTAATTGGTTAATATAAGTTA ATATTGTTCTAACTTTCAACAGGTCATGTTGGCTTGTCATCTGCAAcatt atcatcaaaatacttTACATAGCTGTCAACGTTGGTGTCTTCCTTTGTCT TGATTATATCCTCAATAACAAGTTCCGTTACTATGGTAATGATTGGCTTG AGTGgggtaaactcgataacccagtTCAGCACGACTATACGTCTAGACTA CGGAACTTTCCAACGCCGGGAAATCAGCTGTTACCGTCTTTTGGATATTG TGAGGTTGCAAACTCTGCAAAAGATATCAAAGAATCAACTGGCAACTACC ATAAGGTTCGTCATgtcattttttaagaaattactGTTAAGCTTTTTGTG AGTGTTCAAaagacatccctgtctcacagccccgttggACTCTTTTCCTT AGTGGGGATGAGAATTCCGAtggaaatcccaatggggatagaaattctat tgttccaaggatgaaaaatccagtggggatggttttggagtccaatTTTT AGACGAGTggtgatgaaatcaaagtcaatttccctgttggactgaaattc cagggtattttcccaccggggacgaaatttttaccAATTTGTTTGAAAGC GGACAACCTGTACGGAAAGAAAGGCTGCGAAATGCTTTCCCTTCCTTGTA TCTTTAATTCTTTTCAGAGCAAAAATATCTGTCGTCTTTGGCTAAAATTC TATCTTTGTTCATGGATTAACGGAAATTTGATATGTATAACACTACTCTT ACACTGCGTTTATTATGTTGGTATTATGTTGAATCATTTCTATGTTACAG GTTGTTTGTGAGATATCGCAGCACGTATTATACCAATACACATTACTGGT ATTATGGGTTGCCATATTATGTGGGATCATAATATCAGTTCTCGGTTTGG TCTTCATGATCTTGTACTATCTCTTCCATATTTGCATCAGGTagaatttt catttctttcaaacaaaagaGCAGATTTCCTTTTGATGGATGAAAGTTTC AGTAACATATTCTGTCttctttggggggggggttcccAGCTTCATTATCT ATTTGCCAGAATCTCAACTACCAACCAAATCAATTTTCGATTCTTTCCGG AGGAAGGGGAGAGTGCCACTCTGGGGCCACTCTCTTCTCCCACTTTTGCT CCATTTATCCTTGATCCATCTCTTAAATGCTAAGCATCTAGCAGAGAGAC ATCAAGTAACATTTAACAAGTTTTCGGTGTGACTTTGATATATTTATATA GATTACAACTCAAAAAAGTTTCCTCTTTTCAAAACTATGTTTGTGCATAC TAAGTTGATTCTGTTGCCAAAGAAATACTTTATTTAATCTTTCAACCAAC AATATAGAATCatcgaaaattctttttttcgttAGTCACAGTTTTCAATT ACTTAATTGGTCAACCTTCTTGTTTTCAGAGCACGATTCAGATCACCTCG TGGTGTTCGTAAAGGTCTTTGTATGCGAGAATTGGAATATTTGGATTTCA TTCACCGAAAGAACGTCATGTTGTATGGAGATGTCATCGAAAAATTGCGA AGAATTTAAAATGAATCACcagagagaaattttttaagaatttagaATTA CAAGATTTTTCGCTAAAATCTCTGAATATCAATTAATGTAAATTAACATA ATAATGGTCTTGACACAAAGCTGGATGGATAAATTGTGAGAAGAAGATGT CCAGAGTAAATGCATGCATGATACGAAGCATCAGAAGCTTCAACAAATGT TACTTGTCGAAATAAAGATATTGCCCACAATGtatttgaattgatttgaa acaCGGTCATACTACAGAATAGGCCATTCCACGGTCGGGATGAATCATGG GTTAACAGGGCTGGAAAACTCAAAACCTACAAGGTTTTAGGTCAACAGAA CGCCGTTTTTAGAACGCGAAGGTCCTGATTATTTATGATGCATTTCTTCC GTGAAACTGCATCTTACCAATGAGACATTATCGGGTGTTCAACTCAAAAA CAgaatttgttaaatttcaaaaagattatcttaaaaattgaattttttag tTTGTAAATATGTCACTTTAAACTTCATGGAtggaaaaggtttttttata aatttcaatATCAGAATTTTTTGAGCTTATATCCATATGCAAATTAATTT TTGTTGTCTGGTCCGGGCAGTTACTTGCTGATAGCCTTCAGTAGTCATTC TTACACTGATAAACCCCAG

Coding sequence (CDS) from alignment at sc0000025:669386..673304+

>TCONS_00003109 ID=TCONS_00003109|Name=TCONS_00003109|organism=Clytia hemisphaerica|type=CDS|length=6246bp|location=Sequence derived from alignment at sc0000025:669386..673304+ (Clytia hemisphaerica)
NNGTTGAAGTTATTGTTGGTTGCTTCTCTCATAATGGGCATCAGTTGGTT
CACAGATTCCATTAATTGTATTGTACCCGACAACCATAAAATTGATGGTG
GATTTGTCTCCGCCACATGTTGGATTCAAGGATTTTACATTTTCACTGAT
CTATGGAATCGAACTGATGAGACTTCATATTATGGTGTCACCAAAGATAT
CAACATGGATGGCCGGTTATCTACCGGCGAACTGTGCCCCATGAATCCCA
AGCTTAGACGACATGTTGTCGAAGGGTGTGAACCAATGGAAAAGACATTC
TTTCTTCagTACCATTACATGCCTTTCTTGGTTGCTGCCATGATCATTCC
ATACTATATCCCATACATTATCCATCGAACTGTGAATCGAGATCTCATTA
ATCTGAAGAATGCCATCAAAGAAGATGACGTAGACGCTGATCGACTCACC
AAATATTTCTTCAGTGTTTTTCGACACCCAACTCTCAAGTCATGTTGGCT
TGTCATCTGCAAcattatcatcaaaatacttTACATAGCTGTCAACGTTG
GTGTCTTCCTTTGTCTTGATTATATCCTCAATAACAAGTTCCGTTACTAT
GGTAATGATTGGCTTGAGTGgggtaaactcgataacccagtTCAGCACGA
CTATACGTCTAGACTACGGAACTTTCCAACGCCGGGAAATCAGCTGTTAC
CGTCTTTTGGATATTGTGAGGTTGCAAACTCTGCAAAAGATATCAAAGAA
TCAACTGGCAACTACCATAAGGTTGTTTGTGAGATATCGCAGCACGTATT
ATACCAATACACATTACTGGTATTATGGGTTGCCATATTATGTGGGATCA
TAATATCAGTTCTCGGTTTGGTCTTCATGATCTTGTACTATCTCTTCCAT
ATTTGCATCAGAGCACGATTCAGATCACCTCGTGGTGTTCGTAAAGGTCT
TTGTATGCGAGAATTGGAATATTTGGATTTCATTCACCGAAAGAACGTCA
TGTTGTATGGAGATGTCATCGAAAAATTGCGAAGAATTTAANNGTTGAAG
TTATTGTTGGTTGCTTCTCTCATAATGGGCATCAGTTGGTTCACAGATTC
CATTAATTGTATTGTACCCGACAACCATAAAATTGATGGTGGATTTGTCT
CCGCCACATGTTGGATTCAAGGATTTTACATTTTCACTGATCTATGGAAT
CGAACTGATGAGACTTCATATTATGGTGTCACCAAAGATATCAACATGGA
TGGCCGGTTATCTACCGGCGAACTGTGCCCCATGAATCCCAAGCTTAGAC
GACATGTTGTCGAAGGGTGTGAACCAATGGAAAAGACATTCTTTCTTCag
TACCATTACATGCCTTTCTTGGTTGCTGCCATGATCATTCCATACTATAT
CCCATACATTATCCATCGAACTGTGAATCGAGATCTCATTAATCTGAAGA
ATGCCATCAAAGAAGATGACGTAGACGCTGATCGACTCACCAAATATTTC
TTCAGTGTTTTTCGACACCCAACTCTCAAGTCATGTTGGCTTGTCATCTG
CAAcattatcatcaaaatacttTACATAGCTGTCAACGTTGGTGTCTTCC
TTTGTCTTGATTATATCCTCAATAACAAGTTCCGTTACTATGGTAATGAT
TGGCTTGAGTGgggtaaactcgataacccagtTCAGCACGACTATACGTC
TAGACTACGGAACTTTCCAACGCCGGGAAATCAGCTGTTACCGTCTTTTG
GATATTGTGAGGTTGCAAACTCTGCAAAAGATATCAAAGAATCAACTGGC
AACTACCATAAGGTTGTTTGTGAGATATCGCAGCACGTATTATACCAATA
CACATTACTGGTATTATGGGTTGCCATATTATGTGGGATCATAATATCAG
TTCTCGGTTTGGTCTTCATGATCTTGTACTATCTCTTCCATATTTGCATC
AGAGCACGATTCAGATCACCTCGTGGTGTTCGTAAAGGTCTTTGTATGCG
AGAATTGGAATATTTGGATTTCATTCACCGAAAGAACGTCATGTTGTATG
GAGATGTCATCGAAAAATTGCGAAGAATTTAANNGTTGAAGTTATTGTTG
GTTGCTTCTCTCATAATGGGCATCAGTTGGTTCACAGATTCCATTAATTG
TATTGTACCCGACAACCATAAAATTGATGGTGGATTTGTCTCCGCCACAT
GTTGGATTCAAGGATTTTACATTTTCACTGATCTATGGAATCGAACTGAT
GAGACTTCATATTATGGTGTCACCAAAGATATCAACATGGATGGCCGGTT
ATCTACCGGCGAACTGTGCCCCATGAATCCCAAGCTTAGACGACATGTTG
TCGAAGGGTGTGAACCAATGGAAAAGACATTCTTTCTTCagTACCATTAC
ATGCCTTTCTTGGTTGCTGCCATGATCATTCCATACTATATCCCATACAT
TATCCATCGAACTGTGAATCGAGATCTCATTAATCTGAAGAATGCCATCA
AAGAAGATGACGTAGACGCTGATCGACTCACCAAATATTTCTTCAGTGTT
TTTCGACACCCAACTCTCAAGTCATGTTGGCTTGTCATCTGCAAcattat
catcaaaatacttTACATAGCTGTCAACGTTGGTGTCTTCCTTTGTCTTG
ATTATATCCTCAATAACAAGTTCCGTTACTATGGTAATGATTGGCTTGAG
TGgggtaaactcgataacccagtTCAGCACGACTATACGTCTAGACTACG
GAACTTTCCAACGCCGGGAAATCAGCTGTTACCGTCTTTTGGATATTGTG
AGGTTGCAAACTCTGCAAAAGATATCAAAGAATCAACTGGCAACTACCAT
AAGGTTGTTTGTGAGATATCGCAGCACGTATTATACCAATACACATTACT
GGTATTATGGGTTGCCATATTATGTGGGATCATAATATCAGTTCTCGGTT
TGGTCTTCATGATCTTGTACTATCTCTTCCATATTTGCATCAGAGCACGA
TTCAGATCACCTCGTGGTGTTCGTAAAGGTCTTTGTATGCGAGAATTGGA
ATATTTGGATTTCATTCACCGAAAGAACGTCATGTTGTATGGAGATGTCA
TCGAAAAATTGCGAAGAATTTAANNGTTGAAGTTATTGTTGGTTGCTTCT
CTCATAATGGGCATCAGTTGGTTCACAGATTCCATTAATTGTATTGTACC
CGACAACCATAAAATTGATGGTGGATTTGTCTCCGCCACATGTTGGATTC
AAGGATTTTACATTTTCACTGATCTATGGAATCGAACTGATGAGACTTCA
TATTATGGTGTCACCAAAGATATCAACATGGATGGCCGGTTATCTACCGG
CGAACTGTGCCCCATGAATCCCAAGCTTAGACGACATGTTGTCGAAGGGT
GTGAACCAATGGAAAAGACATTCTTTCTTCagTACCATTACATGCCTTTC
TTGGTTGCTGCCATGATCATTCCATACTATATCCCATACATTATCCATCG
AACTGTGAATCGAGATCTCATTAATCTGAAGAATGCCATCAAAGAAGATG
ACGTAGACGCTGATCGACTCACCAAATATTTCTTCAGTGTTTTTCGACAC
CCAACTCTCAAGTCATGTTGGCTTGTCATCTGCAAcattatcatcaaaat
acttTACATAGCTGTCAACGTTGGTGTCTTCCTTTGTCTTGATTATATCC
TCAATAACAAGTTCCGTTACTATGGTAATGATTGGCTTGAGTGgggtaaa
ctcgataacccagtTCAGCACGACTATACGTCTAGACTACGGAACTTTCC
AACGCCGGGAAATCAGCTGTTACCGTCTTTTGGATATTGTGAGGTTGCAA
ACTCTGCAAAAGATATCAAAGAATCAACTGGCAACTACCATAAGGTTGTT
TGTGAGATATCGCAGCACGTATTATACCAATACACATTACTGGTATTATG
GGTTGCCATATTATGTGGGATCATAATATCAGTTCTCGGTTTGGTCTTCA
TGATCTTGTACTATCTCTTCCATATTTGCATCAGAGCACGATTCAGATCA
CCTCGTGGTGTTCGTAAAGGTCTTTGTATGCGAGAATTGGAATATTTGGA
TTTCATTCACCGAAAGAACGTCATGTTGTATGGAGATGTCATCGAAAAAT
TGCGAAGAATTTAANNGTTGAAGTTATTGTTGGTTGCTTCTCTCATAATG
GGCATCAGTTGGTTCACAGATTCCATTAATTGTATTGTACCCGACAACCA
TAAAATTGATGGTGGATTTGTCTCCGCCACATGTTGGATTCAAGGATTTT
ACATTTTCACTGATCTATGGAATCGAACTGATGAGACTTCATATTATGGT
GTCACCAAAGATATCAACATGGATGGCCGGTTATCTACCGGCGAACTGTG
CCCCATGAATCCCAAGCTTAGACGACATGTTGTCGAAGGGTGTGAACCAA
TGGAAAAGACATTCTTTCTTCagTACCATTACATGCCTTTCTTGGTTGCT
GCCATGATCATTCCATACTATATCCCATACATTATCCATCGAACTGTGAA
TCGAGATCTCATTAATCTGAAGAATGCCATCAAAGAAGATGACGTAGACG
CTGATCGACTCACCAAATATTTCTTCAGTGTTTTTCGACACCCAACTCTC
AAGTCATGTTGGCTTGTCATCTGCAAcattatcatcaaaatacttTACAT
AGCTGTCAACGTTGGTGTCTTCCTTTGTCTTGATTATATCCTCAATAACA
AGTTCCGTTACTATGGTAATGATTGGCTTGAGTGgggtaaactcgataac
ccagtTCAGCACGACTATACGTCTAGACTACGGAACTTTCCAACGCCGGG
AAATCAGCTGTTACCGTCTTTTGGATATTGTGAGGTTGCAAACTCTGCAA
AAGATATCAAAGAATCAACTGGCAACTACCATAAGGTTGTTTGTGAGATA
TCGCAGCACGTATTATACCAATACACATTACTGGTATTATGGGTTGCCAT
ATTATGTGGGATCATAATATCAGTTCTCGGTTTGGTCTTCATGATCTTGT
ACTATCTCTTCCATATTTGCATCAGAGCACGATTCAGATCACCTCGTGGT
GTTCGTAAAGGTCTTTGTATGCGAGAATTGGAATATTTGGATTTCATTCA
CCGAAAGAACGTCATGTTGTATGGAGATGTCATCGAAAAATTGCGAAGAA
TTTAANNGTTGAAGTTATTGTTGGTTGCTTCTCTCATAATGGGCATCAGT
TGGTTCACAGATTCCATTAATTGTATTGTACCCGACAACCATAAAATTGA
TGGTGGATTTGTCTCCGCCACATGTTGGATTCAAGGATTTTACATTTTCA
CTGATCTATGGAATCGAACTGATGAGACTTCATATTATGGTGTCACCAAA
GATATCAACATGGATGGCCGGTTATCTACCGGCGAACTGTGCCCCATGAA
TCCCAAGCTTAGACGACATGTTGTCGAAGGGTGTGAACCAATGGAAAAGA
CATTCTTTCTTCagTACCATTACATGCCTTTCTTGGTTGCTGCCATGATC
ATTCCATACTATATCCCATACATTATCCATCGAACTGTGAATCGAGATCT
CATTAATCTGAAGAATGCCATCAAAGAAGATGACGTAGACGCTGATCGAC
TCACCAAATATTTCTTCAGTGTTTTTCGACACCCAACTCTCAAGTCATGT
TGGCTTGTCATCTGCAAcattatcatcaaaatacttTACATAGCTGTCAA
CGTTGGTGTCTTCCTTTGTCTTGATTATATCCTCAATAACAAGTTCCGTT
ACTATGGTAATGATTGGCTTGAGTGgggtaaactcgataacccagtTCAG
CACGACTATACGTCTAGACTACGGAACTTTCCAACGCCGGGAAATCAGCT
GTTACCGTCTTTTGGATATTGTGAGGTTGCAAACTCTGCAAAAGATATCA
AAGAATCAACTGGCAACTACCATAAGGTTGTTTGTGAGATATCGCAGCAC
GTATTATACCAATACACATTACTGGTATTATGGGTTGCCATATTATGTGG
GATCATAATATCAGTTCTCGGTTTGGTCTTCATGATCTTGTACTATCTCT
TCCATATTTGCATCAGAGCACGATTCAGATCACCTCGTGGTGTTCGTAAA
GGTCTTTGTATGCGAGAATTGGAATATTTGGATTTCATTCACCGAAAGAA
CGTCATGTTGTATGGAGATGTCATCGAAAAATTGCGAAGAATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001729XLOC_001729Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003109-proteinTCONS_00003109-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003109-exon-sc0000025-1491911889:669386..669464TCONS_00003109-exon-sc0000025-1491911889:669386..669464Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1510915933:669386..669464TCONS_00003109-exon-sc0000025-1510915933:669386..669464Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1575043694:669386..669464TCONS_00003109-exon-sc0000025-1575043694:669386..669464Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1491911889:669911..670140TCONS_00003109-exon-sc0000025-1491911889:669911..670140Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1510915933:669911..670140TCONS_00003109-exon-sc0000025-1510915933:669911..670140Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1575043694:669911..670140TCONS_00003109-exon-sc0000025-1575043694:669911..670140Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1491911889:670585..670763TCONS_00003109-exon-sc0000025-1491911889:670585..670763Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1510915933:670585..670763TCONS_00003109-exon-sc0000025-1510915933:670585..670763Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1575043694:670585..670763TCONS_00003109-exon-sc0000025-1575043694:670585..670763Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1491911889:671108..671390TCONS_00003109-exon-sc0000025-1491911889:671108..671390Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1510915933:671108..671390TCONS_00003109-exon-sc0000025-1510915933:671108..671390Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1575043694:671108..671390TCONS_00003109-exon-sc0000025-1575043694:671108..671390Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1491911889:671886..672025TCONS_00003109-exon-sc0000025-1491911889:671886..672025Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1510915933:671886..672025TCONS_00003109-exon-sc0000025-1510915933:671886..672025Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1575043694:671886..672025TCONS_00003109-exon-sc0000025-1575043694:671886..672025Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1491911889:672515..673304TCONS_00003109-exon-sc0000025-1491911889:672515..673304Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1510915933:672515..673304TCONS_00003109-exon-sc0000025-1510915933:672515..673304Clytia hemisphaericaexon
TCONS_00003109-exon-sc0000025-1575043694:672515..673304TCONS_00003109-exon-sc0000025-1575043694:672515..673304Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:669386..673304 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.784695 0.857953 0.619238 0.237063 0.673404 0.785529 14.9187 16.3422 15.0484 11.2187 10.4796 9.75525 24.6231 24.6844 35.0655 27.5745 20.9744 18.4792 15.4697 14.8918 15.1048 13.4231 15.8405 20.0279 23.6919 26.2711 11.2162 9.8824 2.53367 2.31252
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000990Innexin
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Cellular Component
TermDefinition
GO:0005921gap junction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005921 gap junction
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003109 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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