XLOC_001763 (gene) - C. hemisphaerica

Overview
NameXLOC_001763
Unique NameXLOC_001763
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:595864..598759-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001763 ID=XLOC_001763|Name=XLOC_001763|organism=Clytia hemisphaerica|type=gene|length=2896bp|location=Sequence derived from alignment at sc0000025:595864..598759- (Clytia hemisphaerica)
ATGAAAATAATCATTTTGAGTAATTTTGAAGTGTATTTAATACTACAGGT
TTCCCTTTATTTAAGCTGTTTAAAATCTACAAGTAAAATAACATTTTCTA
TTGGAAAATAAAATCTAAAAGGTAATTTGAAATTGATTAAAATAGTTTGA
GTATATAATTATGATGGCAAAATTCGAAAATACAAATTTTTAGTCGAAAC
AAATTTTTAGTCGAAGGGAATATTGATCTCGTAAATTCTAAGTCATTATC
AGCTCAAATATTCAATCCTTTTTGCACAATCTTCAGATTTTTCCGATCAT
GAGATCCGTTAGACCTTGTCAGAATAAAAATATTTTATATTGATCGTAAT
ATATTCTGATGTTGTAATCGTTCCATTACATTCGGTTTCTCAGTTAGGCC
AGTTTCAGCCATTACGAAAGAAAACTTCCGAGTTGCGTAAAAATAATCGT
TTTTCAAAATTTGAATTTTCCATAATGGCATAATGGTTGACTTTTGTTTT
GAGAGCAAAGGCTATAACCTCTTGTACTTCAATAGTTCTCCACTTATTTG
CTGGAATGGCTTCATCCATTGCCTTTAAAGCTTACAGTCCGAATCATTAA
CAGCTTTCTCGTAAACAATTTTCTCAAGCATCAGCCATCTCCATCCCAGT
ATTGGTCTTGCTACTTTCGACACCACCCATCACTTTCCTATTGAATTTCT
TGATCTGTTTCAAAATCTTTGGTTGTAGAAAGATGTAACAAAGTGGATCT
GATATAATGTTCAAAACATTGACACCGATAAGTCCTACGATAACCAACAA
TCGGTCTTCCCCTAACTCCACATGGTTCACAATGATACTTGGTACATAAT
TGAACAAGAAAAAAGTCATAACAATAGCAAAAGGGAGAGCAAATTTACGT
AACATCCTGTACCGGTTGTTGGTTGACCCAGTATTGTTACCACCGTGTGC
CAACCGAGAAGTGTACAGGACTTTGCNCTGCTTTTCGAACCAATCGTTTT
ACTAACATTATATGTACCTCCAAATAAATGAAAATAATCATTTTGAGTAA
TTTTGAAGTGTATTTAATACTACAGGTTTCCCTTTATTTAAGCTGTTTAA
AATCTACAAGTAAAATAACATTTTCTATTGGAAAATAAAATCTAAAAGGT
AATTTGAAATTGATTAAAATAGTTTGAGTATATAATTATGATGGCAAAAT
TCGAAAATACAAATTTTTAGTCGAAACAAATTTTTAGTCGAAGGGAATAT
TGATCTCGTAAATTCTAAGTCATTATCAGCTCAAATATTCAATCCTTTTT
GCACAATCTTCAGATTTTTCCGATCATGAGATCCGTTAGACCTTGTCAGA
ATAAAAATATTTTATATTGATCGTAATATATTCTGATGTTGTAATCGTTC
CATTACATTCGGTTTCTCAGTTAGGCCAGTTTCAGCCATTACGAAAGAAA
ACTTCCGAGTTGCGTAAAAATAATCGTTTTTCAAAATTTGAATTTTCCAT
AATGGCATAATGGTTGACTTTTGTTTTGAGAGCAAAGGCTATAACCTCTT
GTACTTCAATAGTTCTCCACTTATTTGCTGGAATGGCTTCATCCATTGCC
TTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCTCGTAAACAATTTTC
TCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTACTTTCGACAC
CACCCATCACTTTCCTATTGAATTTCTTGATCTGTTTCAAAATCTTTGGT
TGTAGAAAGATGTAACAAAGTGGATCTGATATAATGTTCAAAACATTGAC
ACCGATAAGTCCTACGATAACCAACAATCGGTCTTCCCCTAACTCCACAT
GGTTCACAATGATACTTGGTACATAATTGAACAAGAAAAAAGTCATAACA
ATAGCAAAAGGGAGAGCAAATTTACGTAACATCCTGTACCGGTTGTTGGT
TGACCCAGTATTGTTACCACCGTGTGCCAACCGAGAAGTGTACAGGACTT
TGCAGATGATAAACACATATGCCACCGTAGCGTAACAAGTTGTGAATCCG
TTAAAAACGTGATGCGAGTAGTTGTTGTACGGTGCTCGCTCTGTAGATGT
GGTGTGTTTTAATACCACGCCTGTTGATATAGCGCCACACCATATAAATC
CAATGGCAACATAACTAGCTATTGTTGGGATGTATTTACGATATTTCAAC
TCCAATATGACATACAGCAATCTATCTGTTGTCAGTAAAACCAAGTTAAT
AATATAAGCTACATAAGCAGCTTGATAAGTTACCAAAAAGTCTAAGGAGA
AACCGACATCATAGCCAAAGATGGCTACTGACCATGCATTTGTGGCAATG
TTGAAGAATGAAACCAGATTCAAATGGATCAGTAGGATGGACTGGTTTGA
CAGAATCTTCATCTTGAGTGTACTGATCTGTAGTACCATTGCCAGTAGAT
TCAGCAACATTGCAATGACCATTAATGCTATGTCGAGAACAGCCACAATG
GAGATTGCACCAGCATTGGTATGAAGATGTTGTGTAGCATTTGAATGATT
CGAATGTGCCATTATCGTTNCGATCATAATATATTGTGATGTTGTAATCG
TCCCATTACATTCGGTTTCTAGTTAGGCCAGTTCCAGCCATTATGAAAGA
AAACTTCCGAGTTGCGTAAAAATAATCGTTTTTTCAAAATTTGTATTTTT
CCATAATGGCATAATGGTTGACTTTTATTTTGAGAGCAAAGGCTATAACC
TCTTCTACTTCAATAGTTCTCCACTTATTTGCTGGAATGGCTTCATCCAT
TGCTTTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCTCGTAAACAAT
TTTCTCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003197TCONS_00003197Clytia hemisphaericatranscript
TCONS_00003196TCONS_00003196Clytia hemisphaericatranscript
TCONS_00003195TCONS_00003195Clytia hemisphaericatranscript
TCONS_00003194TCONS_00003194Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003194-proteinTCONS_00003194-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:595864..598759 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.74	0.65	0.82	0.62	32.23	22.18	13.57	12.58	10.49	21.15	11.87	25.2	23.71	18.65	25.9	20.96	12.15	20.76	39.45	53.33	22.88	27.66	22.06	24.06	27.88	21.21	3.81	4.95	228.85	135.49