Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003194 ID=TCONS_00003194|Name=TCONS_00003194|organism=Clytia hemisphaerica|type=transcript|length=1406bp
aattttccatAATGGCATAATGGTtgacttttgttttgagagCAAAGGCT
ATAACCTCTTGTACTTCAATAGTTCTCCACTTATTTGCTGGAATGGCTTC
ATCCATTGCCTTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCTCGTA
AACAATTTTCTCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTA
CTTTCGACACCACCCATCACTTTCCTATTGAATTTCTTGAtctgtttcaa
aatctttggttGTAGAAAGATGTAACAAAGTGGATCTGATATAATGTTCA
AAACATTGACACCGATAAGTCCTACGATAACCAACAATCGGTCTTCCCCT
AACTCCACATGGTTCACAATGATACTTGGTACATAATTGAACAAGAAAAA
AGTCATAACAATAGCAAAAGGGAGAGCAAATTTACGTAACATCCTGTACC
GGTTGTTGGTTGACCCAGTATTGTTACCACCGTGTGCCAACCGAGAAGTG
TACAGGACTTTGCAGATGATAAACACATATGCCACCGTAGCGTAACAAGT
TGTGAATCCGTTAAAAACGTGATGCGAGTAGTTGTTGTACGGTGCTCGCT
CTGTAGATGTGGTGTGTTTTAATACCACGCCTGTTgatatagcgccacac
catataAATCCAATGGCAACATAACTAGCTATTGTTGGGATGTATTTACG
ATATTTCAACTCCAATATGACATACAGCAATCTATCTGTTGTCAGTAAAA
CCAAGTTAATAATATAAGCTACATAAGCAGCTTGATAAGTTACCAAAAAG
TCTAAGGAGAAACCGACATCATAGCCAAAGATGGCTACTGACCATGCATT
TGTGGCAATGTTGAAGAATGAAACCAGATTCAAATGGATCAGTAGGATGG
ACTGGTTTGACAGAATCTTCATCTTGAGTGTACTGATCTGTAGTACCATT
GCCAGTAGATTCAGCAACATTGCAATGACCATTAATGCTATGTCGAGAAC
AGCCACAATGGAGATTGCACCAGCATTGGTATGAAGATGTTGTGTAGCAT
TTGAATGATTCGAATGTGCCATTATCGTTNCGATCATAATATATTGTGAT
GTTGTAATCGTCCCATTACATTCGGTTTCTAGTTAGGCCAGTTCCAGCCA
TTATGAAAGAAAACTTCCGAGTTGCGTAAAAATaatcgttttttcaaaat
ttgtatttttccaTAATGGCATAATGGTTGACTTTTATTTTGAGAGCAAA
GGCTATAACCTCTTCTACTTCAATAGTTCTCCACTTATTTGCTGGAATGG
CTTCATCCATTGCTTTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCT
CGTAAACAATTTTCTCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTT
GCTACT Run BLAST on NCBI protein sequence of TCONS_00003194-protein >TCONS_00003194-protein ID=TCONS_00003194-protein|Name=TCONS_00003194-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MIXTIMAHSNHSNATQHLHTNAGAISIVAVLDIALMVIAMLLNLLAMVLQ
ISTLKMKILSNQSILLIHLNLVSFFNIATNAWSVAIFGYDVGFSLDFLVT
YQAAYVAYIINLVLLTTDRLLYVILELKYRKYIPTIASYVAIGFIWCGAI
STGVVLKHTTSTERAPYNNYSHHVFNGFTTCYATVAYVFIICKVLYTSRL
AHGGNNTGSTNNRYRMLRKFALPFAIVMTFFLFNYVPSIIVNHVELGEDR
LLVIVGLIGVNVLNIISDPLCYIFLQPKILKQIKKFNRKVMGGVESSKTN
TGMEMADA Run BLAST on NCBI transcript from alignment at sc0000025:595864..597269- Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003194 ID=TCONS_00003194|Name=TCONS_00003194|organism=Clytia hemisphaerica|type=transcript|length=1406bp|location=Sequence derived from alignment at sc0000025:595864..597269- (Clytia hemisphaerica)
AATTTTCCATAATGGCATAATGGTTGACTTTTGTTTTGAGAGCAAAGGCT
ATAACCTCTTGTACTTCAATAGTTCTCCACTTATTTGCTGGAATGGCTTC
ATCCATTGCCTTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCTCGTA
AACAATTTTCTCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTA
CTTTCGACACCACCCATCACTTTCCTATTGAATTTCTTGATCTGTTTCAA
AATCTTTGGTTGTAGAAAGATGTAACAAAGTGGATCTGATATAATGTTCA
AAACATTGACACCGATAAGTCCTACGATAACCAACAATCGGTCTTCCCCT
AACTCCACATGGTTCACAATGATACTTGGTACATAATTGAACAAGAAAAA
AGTCATAACAATAGCAAAAGGGAGAGCAAATTTACGTAACATCCTGTACC
GGTTGTTGGTTGACCCAGTATTGTTACCACCGTGTGCCAACCGAGAAGTG
TACAGGACTTTGCAGATGATAAACACATATGCCACCGTAGCGTAACAAGT
TGTGAATCCGTTAAAAACGTGATGCGAGTAGTTGTTGTACGGTGCTCGCT
CTGTAGATGTGGTGTGTTTTAATACCACGCCTGTTGATATAGCGCCACAC
CATATAAATCCAATGGCAACATAACTAGCTATTGTTGGGATGTATTTACG
ATATTTCAACTCCAATATGACATACAGCAATCTATCTGTTGTCAGTAAAA
CCAAGTTAATAATATAAGCTACATAAGCAGCTTGATAAGTTACCAAAAAG
TCTAAGGAGAAACCGACATCATAGCCAAAGATGGCTACTGACCATGCATT
TGTGGCAATGTTGAAGAATGAAACCAGATTCAAATGGATCAGTAGGATGG
ACTGGTTTGACAGAATCTTCATCTTGAGTGTACTGATCTGTAGTACCATT
GCCAGTAGATTCAGCAACATTGCAATGACCATTAATGCTATGTCGAGAAC
AGCCACAATGGAGATTGCACCAGCATTGGTATGAAGATGTTGTGTAGCAT
TTGAATGATTCGAATGTGCCATTATCGTTNCGATCATAATATATTGTGAT
GTTGTAATCGTCCCATTACATTCGGTTTCTAGTTAGGCCAGTTCCAGCCA
TTATGAAAGAAAACTTCCGAGTTGCGTAAAAATAATCGTTTTTTCAAAAT
TTGTATTTTTCCATAATGGCATAATGGTTGACTTTTATTTTGAGAGCAAA
GGCTATAACCTCTTCTACTTCAATAGTTCTCCACTTATTTGCTGGAATGG
CTTCATCCATTGCTTTTAAAGCTTACAGTCCGAATCATTAACAGCTTTCT
CGTAAACAATTTTCTCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTT
GCTACT Coding sequence (CDS) from alignment at sc0000025:595864..597269- >TCONS_00003194 ID=TCONS_00003194|Name=TCONS_00003194|organism=Clytia hemisphaerica|type=CDS|length=927bp|location=Sequence derived from alignment at sc0000025:595864..597269- (Clytia hemisphaerica)
TCAAGCATCAGCCATCTCCATCCCAGTATTGGTCTTGCTACTTTCGACAC
CACCCATCACTTTCCTATTGAATTTCTTGATCTGTTTCAAAATCTTTGGT
TGTAGAAAGATGTAACAAAGTGGATCTGATATAATGTTCAAAACATTGAC
ACCGATAAGTCCTACGATAACCAACAATCGGTCTTCCCCTAACTCCACAT
GGTTCACAATGATACTTGGTACATAATTGAACAAGAAAAAAGTCATAACA
ATAGCAAAAGGGAGAGCAAATTTACGTAACATCCTGTACCGGTTGTTGGT
TGACCCAGTATTGTTACCACCGTGTGCCAACCGAGAAGTGTACAGGACTT
TGCAGATGATAAACACATATGCCACCGTAGCGTAACAAGTTGTGAATCCG
TTAAAAACGTGATGCGAGTAGTTGTTGTACGGTGCTCGCTCTGTAGATGT
GGTGTGTTTTAATACCACGCCTGTTGATATAGCGCCACACCATATAAATC
CAATGGCAACATAACTAGCTATTGTTGGGATGTATTTACGATATTTCAAC
TCCAATATGACATACAGCAATCTATCTGTTGTCAGTAAAACCAAGTTAAT
AATATAAGCTACATAAGCAGCTTGATAAGTTACCAAAAAGTCTAAGGAGA
AACCGACATCATAGCCAAAGATGGCTACTGACCATGCATTTGTGGCAATG
TTGAAGAATGAAACCAGATTCAAATGGATCAGTAGGATGGACTGGTTTGA
CAGAATCTTCATCTTGAGTGTACTGATCTGTAGTACCATTGCCAGTAGAT
TCAGCAACATTGCAATGACCATTAATGCTATGTCGAGAACAGCCACAATG
GAGATTGCACCAGCATTGGTATGAAGATGTTGTGTAGCATTTGAATGATT
CGAATGTGCCATTATCGTTNCGATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003194-exon-sc0000025-1575043694:595864..597269 | TCONS_00003194-exon-sc0000025-1575043694:595864..597269 | Clytia hemisphaerica | exon |
| TCONS_00003194-exon-sc0000025-1510915933:595864..597269 | TCONS_00003194-exon-sc0000025-1510915933:595864..597269 | Clytia hemisphaerica | exon |
| TCONS_00003194-exon-sc0000025-1491911889:595864..597269 | TCONS_00003194-exon-sc0000025-1491911889:595864..597269 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:595864..597269 - |
Blast
The following BLAST results are available for this feature:
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