XLOC_000271 (gene) - C. hemisphaerica

Overview
NameXLOC_000271
Unique NameXLOC_000271
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:127258..130649+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000271 ID=XLOC_000271|Name=XLOC_000271|organism=Clytia hemisphaerica|type=gene|length=3392bp|location=Sequence derived from alignment at sc0000002:127258..130649+ (Clytia hemisphaerica)
AGTCACCTTACCACATGCTGACAACAGGCGCCAAAGCCGAGATGTTTATT
CTCTACATCAGTAAGGAATCGTTAAACATTCATGTGACATCACCAGGGGA
TATAATCGAAAAATGTGAgattgtttttcaaatttatttcttattttctt
ttaaatattttaaatctcTCTCACACCAGTAATAAGTTAGACTTTATAAA
TCATTTTCTGGATATTATTCGTCGGATATTAGTATATAGGAATAGGTCAG
TTGGAACTGCTCACAAGTTTCTGTCTCTAATGCGTTGATAATTTTAGTCT
AGCTGGTCTAGCGAAATTAGTTAAGCGAAAATTATCGTACCGTATTTTTA
CAAAAGTCCGCTCAAAAATCAAATTNTCGTTGATAATTTTAGTCTAGCGA
AATTAGTAACGGCGAAAATTATCGTACCGTATTTTTACAAAAGTCCgctc
aaaaatcaaattacTTTCTGAAGTACTGATTGGTTTATTTGGCTCAATTA
CATCATAATTTTGAGACTTTGGGATTGATTTGATTGTCGAGCGGACATTT
GTATTGTAGAGCCGTATAAACGGTACATAGGCCATTTCatagtcgaaatg
gatcatgggtaatcaggactgattgcgcccgATAACGGTTCCCCGTTAGG
TTAGACGcaataaaaatcttcaaaaattttcaaaacattggaCCAATAGG
AAGTCGttattacccattacgctttgcgactgtggaATGACCTATAAAGA
TTTATGGTTGGTTTTGTGGTTCGATACCGCTAAATTTTGAATCCAAGCCT
AGCCCCCAATAGCTGCTAGTCGTAGTAAGTAAAAGTCTCGATTTACGTAG
TGTAGAATTATTTCTAAAAACATGATTTTTAGCTGTGATAGGTCAAACTC
ACTTGTCAAACAATTTGATAGCTGTCAGCCTAGCTTCAGCCCAGTTTAGT
TTCAGGGTGGTATCGCATTAGATTTATTTTCCATGGTAGGATTTTTGTTG
GCAGTTGCTTGTGTTTTATAAGCTTGATTTTACAGTGGAGCCTCTATAAT
AACTGAAACACGCCCGGGGAACCaaatctttttcgaaaattttcgagtta
tggacACCGAGTTATATTTGTAAGGCACTTTAAACTGAAGGGACAAAAAa
ctgttcgaattaaggagataCTTGGGTAAGAGGTTTATTATTTTTGCACT
TAGATACAGAAATCAGTCCAGTTAAGATTTTTAACGCTATTCCCCATCCT
AATTTAATAGCCTTGGATAATTTCGTAGAGTTGTTTTCTTTCAACTGAAG
TgaattttttaagtaaaaatttagaaaaacatttccAAAGCAAGCTAACT
AAACAGACAGTTCGCATTTTCTGTTCTTGTcgaaatttatttgttttttg
tgCAAGCTTNACTAAACAGACAGTTTGCATTTTCTGTTCTTGTcgaaatt
tatttgttttttgtgCAAGCTTGAACATAACAGCAACACCTTTTGATTCT
TACTTGTCGTACTTAACTCTCTTACGATCTCACTCAAGCATGATTAGCCT
CCGGACCCAGGGATTAGCCTATTTTATAGTTGAGTTCTCACTTCCTGATT
TAACTCTCACTCCCAAATATCTTTTCATCGGAAGATTTTTTTTACATGTT
GGTTTGAAAGAGGAAGAATTAAGATATTAAAAAGGGATTtagtttctttt
gattttttttgtattttaggaATTCAAAACGGTTTCTACTCTCATACACA
TAGACACTAGACATCTTTCTAAATGAAAATGGCGACAGAATTTTTCAGGT
TTAAAGATGGAAGCTTTCTCCATaatggattttattttgttaaaaaatct
ggactaattggaaaaaattttactCGTGAGATTTGTGTGGGCTACCAAGT
CAACTGATAAAGATGTTAGACGTCTCTAGTATTTTTTCTGATTCACAAGG
TCTGACCAATATACCAACCCTTATTCCACAAAATGGTTGGGTTCGAATAA
CGTCAAATGTCAATTATCTGGCAACTTGTTAATGCTTTGATATAATTGGG
AATTGAAAGACCATCATTGAACATTTTAGAGAGATCATAATGTGTTTTAC
ACGTTTTAAGTATCTTTCTCTCAGTTTGATTTTATAATGGTTCTACATGG
TAGTCTTTTTGGACTCAATTATCATGATCTCGATCCATGATACTCTAAAA
AAAAGTTCTAGTCTTGGCAAATTAGCTTTTAGTTCTGAATGAAAAAGAAG
ctcaaaaaaagaattctacAGATACCCAAGCTACCAGCTGACCAGAAGAA
TGGaatttcttttaagatttttaaaaagattataatttCTCTTTCAACTt
gggttttatttttttcccatAGTTAAAGATAAAGAAGTTCTTTTAACCAC
GCGAGGTATAAATAAAGTAAAGTACTATTGTATTGTAATAATAgaataga
aaaacaaaagaaaagtttggATTGAAAGAGGTTAGATGGAAATTTGTTGT
AAGCACTTTAGTTACTATCCTCTTAACGTATCTAAGAAATAGTTTGCACC
TAGCCTGgtttgtttttcatttgagaGTCTAGTTTATTTTCTCTAATATA
TTTTGGAGATTCTATTCTGTGTAgctattgacaacaaatgaaaGTATTCA
GGTTGCTTAAGTCAAAATAATACCAGTAATGTTACCTTAATTTGGACGAT
TGAAAGTTgtgttagtttttttctgaagctcaagtttttcttataaaaaa
ttaggttaaaatcttcaaaatattcttcaaaaagatttttctaaaagacG
GATTCAGAAATACATAGGACTTGTCTACTTTTCATTCACAAGTACCATAA
TACAAATGCTTTTGTCTTTTGCTTCACTCGTATTCAATGAAAAGTACACg
aaataaagaatttctgaaggaaattttaaaatcttaaatttttgtgGAAG
ATTATACAGAGATTCTCTCGTATTCGTTTTCCTTTTGGGGCTTTCATTCT
GAATGCTCATCTATAGGTCTAACTTGAGATACAGTCGACGCTTTCTAACT
CTATTTTCGAGGGGAATTattgaattttcatcgaataggggagcgtatcg
aatatagagcgtcgtttatgagagatTCTTGTTGACATTGACTTTCAATA
TTAGCGAAAAATGAAACGTATAATATAGTAGAGCGTAAAATAAGAAAGAT
TCAACCGTATTGTGGATGTTAATTCTGGAAAACTGTACTGTAATGGCTGC
TTACATGTTCATGAATTTGTGTTGTACAAAATAATTGAAAGGAGTTCCTA
AAGTTTTTTACCTATTCATTTTTTAAGGTTTAAACACAGTAACACGATTC
AAGATTGAAGAACATTGGATGTCAAGAGACTTTGATCAGACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000403TCONS_00000403Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:127258..130649 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	1.46	0	0	0	3.3	0	0	0	0	0	0	0	0	0	0	0	0	0