TCONS_00011280 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011280
Unique NameTCONS_00011280
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2535

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011280 ID=TCONS_00011280|Name=TCONS_00011280|organism=Clytia hemisphaerica|type=transcript|length=2535bp
gaaaaagagaaagagaaaacaaaaagaaaaacatcatcatcagcacaata
aaaaagtgtattttttttattcttgcaattataatttttcagTTGACATA
AATTAATATAAAACCATGGAAGAGcctataaaacaaaatgaagaaaatat
tcCACTTGCTGCAGAACCAAATGGAAACGAAGAATCAGAAGTAGCAGCAG
CTGTTATCGCAGTAGAAGATCAAGTGACTGGTGCGCCACCCGAAGAAGCA
ATAGCTCCAGACGAAGGCACAGAAGATATTATAAAATATGATGAAGATGA
GTTACTTGTCAAACTTGTGCACAGTTATCGCTTCCTTTGGGATCCATTGA
CCAAAGGGTATAAAGATAATGACGAAAAGAAAAGAGCTTGGAGAGATATT
TCAGCTGCCTTGAATAAAGATGTTGATTTTCTAAAGAGGCGTTGGAAGAA
TTTACGAGATGGCATGATGAGATGTCTAAAGAAAGAAAACGCATCATTCC
GATCAAACAGTAAAGTTCCGACATGTCGACTATACAACCAACTCATTTTC
CTGAAAGAGTTTTTCCAAGGGAACAATGTAGACGAGAAACTACTGGTCAG
TTTCAATGGGGAGAACGACAATGATATAGAAATGCCAGACTCCCCGCACA
GCAACTCTTCACCGACACACACCGAACAGAACCAGGTTGGACGCAAGCGG
TCAGCCTCCTCCACCTTAGAACCTGTCCACCAGAGTAAATACAGTAAAAG
GGAGCGTGAGAAATTAGACATCATTATTGCAAACACTTTATCTAAATTGA
CTGACCAGCTGAAAAGTGACGAAGAAAATTCAAACTGGTTGTTCTGTAAA
AGTTTAGTTGGACTATTAGGGAAATTGAGTCCACGTCGTAATAGACTAGC
TAGAATGGAAATTCAACAAGTGCTCATGAAATACGAATTTGGGGATGAGG
TACCGGCTGAGGAAGCCTTGGTGGAGGAATAGAATGATCTTAATTCATCT
ATGGAAAGGAGCAGttttaatttatcatttttctggatggatttcatttt
tttgcacTTCATTTGGATTGGATTGGTTTACATGAATTTGGTggaatttc
cttgttttttatcgaattgtttttttgcttcACTCCTGAAAAGGCTGAAT
AAACAATTTCTGGTTCAACATTTACAACTCGCCTACAAAAATGGTTTAAG
CTTtacttttaaaatgaaaataatggtTAAAAGAGGAGATGCTGTATTAC
TTGAGGCGatgaatttaatttgaaaaaactgtAACATAACTAAAGAGTCT
CATTTTTAAACTAGAGGGAAAAGTACAGCTGGATTATGGGTCATTTTCGG
ATCAATAGCATTGGTGATATCTCTTGCGAtatctttttcaaattgaagTT
TGCAATCAAACAAGATTACATTTAAACTTGGAGACTCGAAATTTTGTTCT
CTAACACATAAAGATTCGCCAAATTGCAGATGGTGATGTTACGCTGTAAA
ATCATTACCAAGGATGATATGGTATTGTTTTTTTCAAGTACGgtatgaat
aatttttttctccatttcaaTTACTCCTTGGGTTAGGTtgggttcatttc
taaacaaggGCGTTGCTGGTACTAAAATCCCAGACATGACATGAGTACTT
TAAAGTGTTTTTCATCCCGGTTTATCATAGAAGTGGTGTTTTAGCACACT
ATGTACTCACTCGCTATGTTGTCAGAGATTTTatagtactgacccccccc
cctgttctAAAAGGTGTGAATATGCTACTTTTTTAAGGTGTCAATGCTAC
TTTACACTCCTTCCTTTCGACTTTCATTTCCTCAGTGTTTGCTAGGCCAT
ATTTTGCATTATCacgtttcaaaaattcatttcttgGCTTTTATTTCCAT
AAGGCCTGCTTTCCtttcatttttgctgtaaaaaaaatcgtttctattaa
agtctgtctcaatataatttgcagtggATACACAAaaagctgtaactttt
gatataattcGATATCGAATAATCGAttagattttcttcttcttcatttt
caatcttcattttccgatctttttttagtttttttaatgatattccactc
ctgtttatcttttcaacaagcacaaaactgcaatctaattcgaattatgt
caaaagttatagccttttttgtctccgctgcaacacttcaaattatattg
agacagactttaaattGTTCAAACAAACTGCAAACATTCTCAAGNtagcc
ttttttgtctccgctgcagcaccgcaaattatattgagacagactttaaa
tcGTTCAAACAAACGGCAAACAttctcaagttttttttatgtaGGTACAC
ATTATATTATTCTAATTTCTAATGTTAAGGACAATTTagtttacaaaaat
tattttaagctTAGATATGATGCCCACTGTATATACTTTATTTCAAGGGT
ATAGGTTTTTTAAATAAGGACCGTTTATTATTCATAATAATTAATTGGCt
ggtttctttttataataatgttttttttttctggg
Run BLAST on NCBI

protein sequence of TCONS_00011280-protein

>TCONS_00011280-protein ID=TCONS_00011280-protein|Name=TCONS_00011280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MEEPIKQNEENIPLAAEPNGNEESEVAAAVIAVEDQVTGAPPEEAIAPDE
GTEDIIKYDEDELLVKLVHSYRFLWDPLTKGYKDNDEKKRAWRDISAALN
KDVDFLKRRWKNLRDGMMRCLKKENASFRSNSKVPTCRLYNQLIFLKEFF
QGNNVDEKLLVSFNGENDNDIEMPDSPHSNSSPTHTEQNQVGRKRSASST
LEPVHQSKYSKREREKLDIIIANTLSKLTDQLKSDEENSNWLFCKSLVGL
LGKLSPRRNRLARMEIQQVLMKYEFGDEVPAEEALVEE
Run BLAST on NCBI

transcript from alignment at sc0000124:513685..518578+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011280 ID=TCONS_00011280|Name=TCONS_00011280|organism=Clytia hemisphaerica|type=transcript|length=4894bp|location=Sequence derived from alignment at sc0000124:513685..518578+ (Clytia hemisphaerica)
gaaaaagagaaagagaaaacaaaaagaaaaacatcatcatcagcacaata aaaaagtgtattttttttattcttgcaattataatttttcagTTGACATA AATTAATATAAAACCATGGAAGAGcctataaaacaaaatgaagaaaatat tcCACTTGCTGCAGAACCAAATGGAAACGAAGAATCAGAAGTAGCAGCAG CTGTTATCGCAGTAGAAGATCAAGTGACTGGTGCGCCACCCGAAGAAGCA ATAGCTCCAGACGAAGGTAAGACTTTTTTAACTATTGAAGAAGTTATTTA GTATTTAATTATTAATAGTATCAAGTCAAAACACATCCTATATAGTAAAA GATTTTTANGCAGTAGAAGATCAAGTAACTGGTGCGCCACCCGAAGAAGC TATAGCTCCAGACGAAGGTAAGACTTTTTTAAACTATTGAAGAAGCTATT TAGTATTTAATTATTAATAGTATCAAGTCAAAACACATCCTATATAGTAA AAGATTTTTATGTGTATAATCATAAAACTGTATTTTGAGCTCTCCATGGT TTTCCTCTGGTCTTTATGGACATGTACATTTgtgcagggctcgaaataac ggtcggacatcggacattgtccgacccaattgctgaaatgtccgacccaa atcgattctagtcggacatcatgtccgaccaAATTACTTTCGGTGCCTTc gaaaaatttgtcagatgcgttgtgaaatttccaaaagaaattgtaattta catagaattagtaacatctttatttacacacaaaaactctcaaagttgca atcattagtgttagatattcattttgtgtgatgctttttctcaacaaatg aaaGCATGCTTCAAGTAAAAATCATGGGCTTCTGACCATNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNATGTCCGacacaaatcaatttttgatcggacaatgtgtccgaccacc taaatatcgttatttcgagccctgtttGTGCAAAAGGGAAACAAAAGGTG CTACCCCAATCAATACATGGATCGTACTTTCCCATACTTCCACACAAACT CAACCATATGTTCAAACTCAATACTTTTTTCCCAGACAACTGTATAATGC CTTCTATATTTTGTCATAATATTCAGGCACAGAAGATATTATAAAATATG ATGAAGATGAGTTACTTGTCAAACTTGTGCACAGTTATCGCTTCCTTTGG GATCCATTGACCAAAGGGTATAAAGATAATGACGAAAAGAAAAGAGCTTG GAGAGATATTTCAGCTGCCTTGAATAAAGATGGTAAGTAATGAAACAGTT TTGCGTCCTATTACTGCCAGACTTTGCATGTTATAATTTTGTCAGGGGTC AGTTTGTACATGAGAACCATGGCATTCAATGgtctaattttgaaagtggC AAAATAAAGTTAATTACACCCTATGAACTAAGTGCAAAAACAGGTAATAT ACTTAGCCATTAACAACAATTTTTATGTACTAACCGGTACTAACTgtcaa aaattaagttttttggacctacctcggtggggtggaggtcctaaattaac ctgtgttcatTCGTTTGTCCGTTTGTCCTTCCGTCTGTTcattcgtctgt taccaacttttctcagtattgaatcataggaatcttttgatttttggtag aaagttgcaaaatggtggtggccaaaatgtgacggagcccaatttttgaa aaaaaaaatttgggggcaaatttgggccaaataaaatttttcccaaaaat tacaatgtttttttataaaaaacaagtaatacttttatggacctagctgg ttatcaaactaaaatcaatgaaacaatgaaacacataagacataactggt caaaatacaaaaaaataaagaaaaatgaaagcatatctattgagagaaac tttcaacactattgaaaaagacttatgaaaaagaaataaaaaagcttaaa aaatgttttctttcttcttgTATTTTGTAGTTGATTTTCTAAAGAGGCGT TGGAAGAATTTACGAGATGGCATGATGAGATGTCTAAAGAAAGAAAACGC ATCATTCCGATCAAACAGTAAAGTTCCGACATGTCGACTATACAACCAAC TCATTTTCCTGAAAGAGTTTTTCCAAGGGAACAATGTAGACGAGAAACTA CTGGTCAGTTTCAATGGGGAGAACGACAATGATATAGAAATGCCAGACTC CCCGCACAGCAACTCTTCACCGACACACACCGAACAGAACCAGGTTGGAC GCAAGCGGTCAGCCTCCTCCACCTTAGAACCTGTCCACCAGAGTAAATAC AGTAAAAGGGAGCGTGAGAAATTAGACATCATTATTGCAAACACTTTATC TAAATTGACTGACCAGCTGAAAAGTGACGAAGAAAATTCAAACTGGTTGT TCTGTAAAAGTTTAGTTGGACTATTAGGGAAATTGAGTCCACGTCGTAAT AGACTAGCTAGAATGGAAATTCAACAAGTGCTCATGAAATACGAATTTGG GGATGAGGTACCGGCTGAGGAAGCCTTGGTGGAGGAATAGAATGATCTTA ATTCATCTATGGAAAGGAGCAGttttaatttatcatttttctggatggat ttcatttttttgcacTTCATTTGGATTGGATTGGTTTACATGAATTTGGT ggaatttccttgttttttatcgaattgtttttttgcttcACTCCTGAAAA GGCTGAATAAACAATTTCTGGTTCAACATTTACAACTCGCCTACAAAAAT GGTTTAAGCTTtacttttaaaatgaaaataatggtTAAAAGAGGAGATGC TGTATTACTTGAGGCGatgaatttaatttgaaaaaactgtAACATAACTA AAGAGTCTCATTTTTAAACTAGAGGGAAAAGTACAGCTGGATTATGGGTC ATTTTCGGATCAATAGCATTGGTGATATCTCTTGCGAtatctttttcaaa ttgaagTTTGCAATCAAACAAGATTACATTTAAACTTGGAGACTCGAAAT TTTGTTCTCTAACACATAAAGATTCGCCAAATTGCAGATGGTGATGTTAC GCTGTAAAATCATTACCAAGGATGATATGGTATTGTTTTTTTCAAGTACG gtatgaataatttttttctccatttcaaTTACTCCTTGGGTTAGGTtggg ttcatttctaaacaaggGCGTTGCTGGTACTAAAATCCCAGACATGACAT GAGTACTTTAAAGTGTTTTTCATCCCGGTTTATCATAGAAGTGGTGTTTT AGCACACTATGTACTCACTCGCTATGTTGTCAGAGATTTTatagtactga cccccccccctgttctAAAAGGTGTGAATATGCTACTTTTTTAAGGTGTC AATGCTACTTTACACTCCTTCCATTCGACTTTCATTTCCTCAGTGTTNcc cccccccccccccctgttctAAAAGGTGTGAATATGCTACTTTAAGGTGT CAATGCTACTTTACACTCCTTCCTTTCGACTTTCATTTCCTCAGTGTTTG CTAGGCCATATTTTGCATTATCacgtttcaaaaattcatttcttgGCTTT TATTTCCATAAGGCCTGCTTTCCtttcatttttgctgtaaaaaaaatcgt ttctattaaagtctgtctcaatataatttgcagtggATACACAAaaagct gtaacttttgatataattcGATATCGAATAATCGAttagattttcttctt cttcattttcaatcttcattttccgatctttttttagtttttttaatgat attccactcctgtttatcttttcaacaagcacaaaactgcaatctaattc gaattatgtcaaaagttatagccttttttgtctccgctgcaacacttcaa attatattgagacagactttaaattGTTCAAACAAACTGCAAACATTCTC AAGNtagccttttttgtctccgctgcagcaccgcaaattatattgagaca gactttaaatcGTTCAAACAAACGGCAAACAttctcaagttttttttatg taGGTACACATTATATTATTCTAATTTCTAATGTTAAGGACAATTTagtt tacaaaaattattttaagctTAGATATGATGCCCACTGTATATACTTTAT TTCAAGGGTATAGGTTTTTTAAATAAGGACCGTTTATTATTCATAATAAT TAATTGGCtggtttctttttataataatgttttttttttctggg

Coding sequence (CDS) from alignment at sc0000124:513685..518578+

>TCONS_00011280 ID=TCONS_00011280|Name=TCONS_00011280|organism=Clytia hemisphaerica|type=CDS|length=2601bp|location=Sequence derived from alignment at sc0000124:513685..518578+ (Clytia hemisphaerica)
ATGGAAGAGcctataaaacaaaatgaagaaaatattcCACTTGCTGCAGA
ACCAAATGGAAACGAAGAATCAGAAGTAGCAGCAGCTGTTATCGCAGTAG
AAGATCAAGTGACTGGTGCGCCACCCGAAGAAGCAATAGCTCCAGACGAA
GGCACAGAAGATATTATAAAATATGATGAAGATGAGTTACTTGTCAAACT
TGTGCACAGTTATCGCTTCCTTTGGGATCCATTGACCAAAGGGTATAAAG
ATAATGACGAAAAGAAAAGAGCTTGGAGAGATATTTCAGCTGCCTTGAAT
AAAGATGTTGATTTTCTAAAGAGGCGTTGGAAGAATTTACGAGATGGCAT
GATGAGATGTCTAAAGAAAGAAAACGCATCATTCCGATCAAACAGTAAAG
TTCCGACATGTCGACTATACAACCAACTCATTTTCCTGAAAGAGTTTTTC
CAAGGGAACAATGTAGACGAGAAACTACTGGTCAGTTTCAATGGGGAGAA
CGACAATGATATAGAAATGCCAGACTCCCCGCACAGCAACTCTTCACCGA
CACACACCGAACAGAACCAGGTTGGACGCAAGCGGTCAGCCTCCTCCACC
TTAGAACCTGTCCACCAGAGTAAATACAGTAAAAGGGAGCGTGAGAAATT
AGACATCATTATTGCAAACACTTTATCTAAATTGACTGACCAGCTGAAAA
GTGACGAAGAAAATTCAAACTGGTTGTTCTGTAAAAGTTTAGTTGGACTA
TTAGGGAAATTGAGTCCACGTCGTAATAGACTAGCTAGAATGGAAATTCA
ACAAGTGCTCATGAAATACGAATTTGGGGATGAGGTACCGGCTGAGGAAG
CCTTGGTGGAGGAATAGATGGAAGAGcctataaaacaaaatgaagaaaat
attcCACTTGCTGCAGAACCAAATGGAAACGAAGAATCAGAAGTAGCAGC
AGCTGTTATCGCAGTAGAAGATCAAGTGACTGGTGCGCCACCCGAAGAAG
CAATAGCTCCAGACGAAGGCACAGAAGATATTATAAAATATGATGAAGAT
GAGTTACTTGTCAAACTTGTGCACAGTTATCGCTTCCTTTGGGATCCATT
GACCAAAGGGTATAAAGATAATGACGAAAAGAAAAGAGCTTGGAGAGATA
TTTCAGCTGCCTTGAATAAAGATGTTGATTTTCTAAAGAGGCGTTGGAAG
AATTTACGAGATGGCATGATGAGATGTCTAAAGAAAGAAAACGCATCATT
CCGATCAAACAGTAAAGTTCCGACATGTCGACTATACAACCAACTCATTT
TCCTGAAAGAGTTTTTCCAAGGGAACAATGTAGACGAGAAACTACTGGTC
AGTTTCAATGGGGAGAACGACAATGATATAGAAATGCCAGACTCCCCGCA
CAGCAACTCTTCACCGACACACACCGAACAGAACCAGGTTGGACGCAAGC
GGTCAGCCTCCTCCACCTTAGAACCTGTCCACCAGAGTAAATACAGTAAA
AGGGAGCGTGAGAAATTAGACATCATTATTGCAAACACTTTATCTAAATT
GACTGACCAGCTGAAAAGTGACGAAGAAAATTCAAACTGGTTGTTCTGTA
AAAGTTTAGTTGGACTATTAGGGAAATTGAGTCCACGTCGTAATAGACTA
GCTAGAATGGAAATTCAACAAGTGCTCATGAAATACGAATTTGGGGATGA
GGTACCGGCTGAGGAAGCCTTGGTGGAGGAATAGATGGAAGAGcctataa
aacaaaatgaagaaaatattcCACTTGCTGCAGAACCAAATGGAAACGAA
GAATCAGAAGTAGCAGCAGCTGTTATCGCAGTAGAAGATCAAGTGACTGG
TGCGCCACCCGAAGAAGCAATAGCTCCAGACGAAGGCACAGAAGATATTA
TAAAATATGATGAAGATGAGTTACTTGTCAAACTTGTGCACAGTTATCGC
TTCCTTTGGGATCCATTGACCAAAGGGTATAAAGATAATGACGAAAAGAA
AAGAGCTTGGAGAGATATTTCAGCTGCCTTGAATAAAGATGTTGATTTTC
TAAAGAGGCGTTGGAAGAATTTACGAGATGGCATGATGAGATGTCTAAAG
AAAGAAAACGCATCATTCCGATCAAACAGTAAAGTTCCGACATGTCGACT
ATACAACCAACTCATTTTCCTGAAAGAGTTTTTCCAAGGGAACAATGTAG
ACGAGAAACTACTGGTCAGTTTCAATGGGGAGAACGACAATGATATAGAA
ATGCCAGACTCCCCGCACAGCAACTCTTCACCGACACACACCGAACAGAA
CCAGGTTGGACGCAAGCGGTCAGCCTCCTCCACCTTAGAACCTGTCCACC
AGAGTAAATACAGTAAAAGGGAGCGTGAGAAATTAGACATCATTATTGCA
AACACTTTATCTAAATTGACTGACCAGCTGAAAAGTGACGAAGAAAATTC
AAACTGGTTGTTCTGTAAAAGTTTAGTTGGACTATTAGGGAAATTGAGTC
CACGTCGTAATAGACTAGCTAGAATGGAAATTCAACAAGTGCTCATGAAA
TACGAATTTGGGGATGAGGTACCGGCTGAGGAAGCCTTGGTGGAGGAATA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006325XLOC_006325Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011280-proteinTCONS_00011280-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011280-exon-sc0000124-1491911889:513685..513950TCONS_00011280-exon-sc0000124-1491911889:513685..513950Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1510915933:513685..513950TCONS_00011280-exon-sc0000124-1510915933:513685..513950Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1575043694:513685..513950TCONS_00011280-exon-sc0000124-1575043694:513685..513950Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1491911889:515511..515666TCONS_00011280-exon-sc0000124-1491911889:515511..515666Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1510915933:515511..515666TCONS_00011280-exon-sc0000124-1510915933:515511..515666Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1575043694:515511..515666TCONS_00011280-exon-sc0000124-1575043694:515511..515666Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1491911889:516365..517729TCONS_00011280-exon-sc0000124-1491911889:516365..517729Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1510915933:516365..517729TCONS_00011280-exon-sc0000124-1510915933:516365..517729Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1575043694:516365..517729TCONS_00011280-exon-sc0000124-1575043694:516365..517729Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1491911889:517831..518578TCONS_00011280-exon-sc0000124-1491911889:517831..518578Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1510915933:517831..518578TCONS_00011280-exon-sc0000124-1510915933:517831..518578Clytia hemisphaericaexon
TCONS_00011280-exon-sc0000124-1575043694:517831..518578TCONS_00011280-exon-sc0000124-1575043694:517831..518578Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000124supercontigsc0000124:513685..518578 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.9478 23.3465 17.2222 16.9557 44.8673 32.2432 33.4342 37.8652 13.5581 16.203 12.1285 6.99426 8.63969 7.40351 7.5948 8.11259 17.0971 14.9923 4.07562 4.45749 10.7856 9.34247 14.2027 16.7443 19.7851 26.7089 9.13736 7.79819 9.55801 13.2445
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
IPR004210BESS_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011280 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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