TCONS_00011280-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011280-protein
Unique NameTCONS_00011280-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011280-protein ID=TCONS_00011280-protein|Name=TCONS_00011280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MEEPIKQNEENIPLAAEPNGNEESEVAAAVIAVEDQVTGAPPEEAIAPDE
GTEDIIKYDEDELLVKLVHSYRFLWDPLTKGYKDNDEKKRAWRDISAALN
KDVDFLKRRWKNLRDGMMRCLKKENASFRSNSKVPTCRLYNQLIFLKEFF
QGNNVDEKLLVSFNGENDNDIEMPDSPHSNSSPTHTEQNQVGRKRSASST
LEPVHQSKYSKREREKLDIIIANTLSKLTDQLKSDEENSNWLFCKSLVGL
LGKLSPRRNRLARMEIQQVLMKYEFGDEVPAEEALVEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006325XLOC_006325Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011280TCONS_00011280Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
IPR004210BESS_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006578MADF domainSMARTSM00595118neu2coord: 63..151
e-value: 8.2E-16
score: 68.5
IPR006578MADF domainPFAMPF10545MADF_DNA_bdgcoord: 64..146
e-value: 2.9E-17
score: 62.6
IPR006578MADF domainPROSITEPS51029MADFcoord: 63..151
score: 14.407
IPR004210BESS motifPFAMPF02944BESScoord: 242..272
e-value: 1.8E-6
score: 27.5
IPR004210BESS motifPROSITEPS51031BESScoord: 237..276
score: 9.774
NoneNo IPR availableGENE3D1.10.10.60coord: 57..129
e-value: 0.002
score: 17.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011280-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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