TCONS_00073842 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073842
Unique NameTCONS_00073842
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073842 ID=TCONS_00073842|Name=TCONS_00073842|organism=Clytia hemisphaerica|type=transcript|length=166bp
tggtccGTAAAGTCAGAATTTAGATATATATCTCTATTTCTCTGTAATAA
ATCaaccgttttacaaaattctttctgTGTTTGACTAAAATGGAATAAAG
TACTACTTTATATACTTTAGAAAGGGctttgaaataccaaaatagtccag
aaattccaaattatca
Run BLAST on NCBI

transcript from alignment at scaffold_98:169585..169750

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073842 ID=TCONS_00073842|Name=TCONS_00073842|organism=Clytia hemisphaerica|type=transcript|length=166bp|location=Sequence derived from alignment at scaffold_98:169585..169750 (Clytia hemisphaerica)
tgataatttggaatttctggactattttggtatttcaaagCCCTTTCTAA
AGTATATAAAGTAGTACTTTATTCCATTTTAGTCAAACAcagaaagaatt
ttgtaaaacggttGATTTATTACAGAGAAATAGAGATATATATCTAAATT
CTGACTTTACggacca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045860XLOC_045860Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073842-exon-scaffold_98-1491911889:169585..169750TCONS_00073842-exon-scaffold_98-1491911889:169585..169750Clytia hemisphaericaexon
TCONS_00073842-exon-scaffold_98-1510915933:169585..169750TCONS_00073842-exon-scaffold_98-1510915933:169585..169750Clytia hemisphaericaexon
TCONS_00073842-exon-scaffold_98-1575043694:169585..169750TCONS_00073842-exon-scaffold_98-1575043694:169585..169750Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:169585..169750 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073842 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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