TCONS_00073808 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073808
Unique NameTCONS_00073808
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073808 ID=TCONS_00073808|Name=TCONS_00073808|organism=Clytia hemisphaerica|type=transcript|length=3222bp
TCCACCGATTGAGGTTTTGAAAGTCACCCTGAAAACCTCTTTAAAATAAA
AGGTGTCTTATAAGTTTATATCGGATAATTTGTGTATACAACATAATAAC
ACGGGGGTATATTTTCCCCGACGTTTTATACAGATTGTTTTGCAATTTGA
CTTTTGGCTTAATTTCGTTGAAGGGAGTTCACAATGGATGAATTGTGCGT
TTTGTTGTTGCGTTGGTATAAATTGGCCCAAGTTCGGAGGCTCGATGTCA
ACCCAACCACACCTGCGAAGAAAAGGCTTGAAATTCATCATACGCAACCA
TGGTCAAGAAGGAAGAAATCAATACCATCCAATACTACAGTTTGAAAGCT
GTCGATGGtgaaaaagtgaagaaattacTTCGAAACACAATCAATGCTCT
TTCAGAGAAAGAATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCACAG
ACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTCACAG
CTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGA
CATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCTCTGA
GTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTC
AATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGA
AAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAA
TGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATT
GACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATGGATT
GACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTT
CAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATCCTTCAAAC
AAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCAT
TGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCG
ATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTC
GACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAA
TGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCT
CAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTAC
GTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCACC
CCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATC
ACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCAT
GAAGGCTGGATTCGACATGgAATCGCTGAGATTATCAAGATGGCTGTTGT
AAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATTGA
TTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAACG
TTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGGA
ATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGGCC
ATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACAC
GCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAAA
CTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAGTACAA
TGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTGCT
GCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTTTGTGCACC
AGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGTCACGTG
ATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAGCAATTT
CCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGGGCTGGA
AGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGCAATCTA
ATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCA
TCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATG
GCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTG
ATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATG
GCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGAC
GCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTC
AATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGAT
GTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCC
CGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACG
TTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTC
GAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCA
GAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTT
ACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATC
TTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCG
AAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGG
TGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGG
CGTTAAATAAACCGCTCATTCATACAGACACATTCAGAgaagaaatttta
gatttcaattACATATTCCAAACAACATTATTATTTTCAcgttatttttt
gtaaataattttttttgaaggttTCACCAAATTCTTGCATCAGCATTTTT
ATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCAT
CAGCATTTTTATGTCACTTCTTTTATCAAAGaacagaaaaattttgaatt
ctaaATTTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAG
CAGTTAATAGGTTGTATTCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..18650-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073808 ID=TCONS_00073808|Name=TCONS_00073808|organism=Clytia hemisphaerica|type=transcript|length=10646bp|location=Sequence derived from alignment at scaffold_98:8005..18650- (Clytia hemisphaerica)
TCCACCGATTGAGGTTTTGAAAGTCACCCTGAAAACCTCTTTAAAATAAA
AGGTGTCTTATAAGTTTATATCGGATAATTTGTGTATACAACATAATAAC
ACGGGGGTATATTTTCCCCGACGTTTTATACAGATTGTTTTGCAATTTGA
CTTTTGGCTTAATTTCGTTGAAGGGAGTTCACAATGGATGAATTGTGCGT
TTTGTTGTTGCGTTGGTATAAATTGGCCCAAGTTCGGAGGCTCGATGTCA
ACCCAACCACACCTGCGAAGAAAAGGCTTGAAATTCATCATACGCAACCA
TGGTCAAGAAGGAAGAAATCAATACCATCCAATACTACAGTTTGAAAGCT
GTCGATGGTGAAAAAGTGAAGAAATTACTTCGAAACACAATCAATGCTCT
TTCAGAGAAAGAATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCACAG
ACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTCACAG
CTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGA
CATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCTCTGA
GTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTC
AATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGA
AAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAA
TGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATT
GACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATGGATT
GACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTT
CAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAGATCCTGTT
TTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCCATATAGTA
TACTTTTATTCTTGATCAAGGCCAAATGATTTGTAAGTTACCAAGTGAAA
CGATCCAAATTGCAAATACTTCTTCAAGTATGTCTTAAGACAAAACACTT
TTAACGGTTTAATAAGTGGTAGAGTCTAACGGCTGTGAACCCGTTTGTGA
AATTTCTTTTACTGTACTTATTTCTTAGAAATGGGGTATGTCTTGGACTA
TAGCATAGTCTAGTGCGTAAGGTGACCTTTTGCCTCTTAACTCGCCAGTT
AAATGAGTTTGGGAGTTTGTNGACCAGGTTTGTCACAGACGTTCTTGATA
CACGTTCACTCGCTGAATTATTAATCTATGTTTCACAGCTACCAGTTTTT
AGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGACATCCTTGCTTT
GATGAAGAAATTCAAATATTACAATAACCTCCCTCTGAGTCAAATCCTCT
GCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTCAATGACACTTTC
GACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGAAAACCTCAAGTT
GAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAATGTCGACTGGCT
TTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATTGACCCACACGCA
GTCTACCCAACCAGTATTTACCGACATTGCAATGGATTGACGTTGGCAGC
AGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTTCAATAACAACAT
CTATCAAAATCACTAATAAGGTATGCGAAGATCCTGTTTTGTCTTCTGCT
CCAAGATATTCCTTTTTATATGTTTATTCCATTTTATAGTATACTTCTAT
TCTTGATCAAGGCCAAATGATTTGTAAGTTACCAAGTAAAACGATCCAAA
TTGCAAATACTTCTTCAAGTAGGTCTGATATCTAAAGACAAAACACTTTT
AACGGTTTAATAAGTGGTAGAGTCTAACGGCTGTGAACCCGTTTGTGAAA
TTTCTTGTACTGTACTTATTTCTTAGAAATGGGGTATGTCTTGGACTATA
GCATAGTCTAGTGCGTAAGGTGACCTTTTGTCTCTTAACTCGCCAGTTAA
ATGAGTTTGGGAGTTTGTTTGCTCCGTCTCTGGATTCTTCGGGAAGTGTC
TTCTGTCTCCCGATCCCTAGCCTGGTTAACCAAGCCGGTTTTTACAAGGC
CAAGAAAGATACGGCTGAAGACCATATAGCATTATCGGTGCTTTAATGAT
TTTTATGATGTACGGAATTTTAATTTTGCCTTGAAAAAACTGGCTTACGC
GAAGCGCGCGTTCATATTTTGAACGCAGAAGTCGGTGAGACTCGGCGAGC
ATTTGGCCTCTTCTAATTGGTCATAATACACCATGTGATAAGAAACGAAA
TTTTTCGTTTGTTTTGAAAACGCTTTTCACTTCTCAACGAAAAACTTTTT
AAACATATTTTATTCTGTACTTTTTGCATAAAAAGAAAGATATGTTTTTC
TCTCTCCCTCTTTTAATTTGCAAAACCTTTATATAACTGAATGAAAGAGA
AGTTCATTAAATAGGGAGGAGGGTGTGTTTATTTAACAAATTCCTTATTT
TTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGCTTGG
AAAAGCTTGAAGCACTCAATCTAGCCCTTCGGGATTTACAGAAATCTGTA
CCGTTACCGTAGCTGCGGCAGACCATGAAGGTCAAGGTGTCTTAACAATG
TGTTGACTGACTAATGTCGTTCTTTGGGAAGTTGTAATATCGCCGCATTT
TTCTTTAACAGAGATTGCACGGGTCAAAGTTACGAAATATGAGCAATGAG
GCATTTTACTCCAAAACAGATTTTGACACATCATGTCAAAAGCTAGTAAT
TTGACCTGATAATCGAATCAAAAATGAGAAATCAAGTATTTGAAAACTCC
CAAAATGGGAAATTAAACAAAGAGTGCCTCTGCTGTATTTGAAAGATGAC
GTAAGATGAGAAAGAAAAGTACTATCCTACACAACAGGGAATATATAATA
GTTCCTGTGTTGTTATAAAGAAACTCGTGTTAGGTCAAATAGGACGACAC
TGCATTTACTAGTCGAAGATTCAGGCCCGAGAATATCCAGGAATTAAGTT
TTTTTGAACTGCCAATTTATTTTGTCACCCAGGTAATAAAGGGTTTTAAG
CATCACAGGGGCAGATTTGAATTGTCTTTAATAAAAATTGCAGTTAAAGC
CTTCGTAATTTCACAAGCACCATGCTTGTGTAATCAAAGTAATTGCCATT
GAAGTTAAGCCTAATTTTGGCCCAAACGCTGGGAAACCAGGTTAGAAGCT
GGTAACATCGTGTATAAGCGGTTTGCATTTGAATTACCAATTGTTCATCT
CTCAGGTGCTTCATCCTTCAAACAAGACATTGATCAACACTTACCTACAC
TTTGGGCGTTGCGTCGCCATCATTGACGATAAAGTCATCCTGCACTATGG
TGAAGAATTGCAAAAATATTTCGATCATTTCGGTGTTGAGTTGGTGAATT
TGATCCATGGTGGTAACGAGGTCGACAAAGATATCAAGAGCGTGGAGAAG
ATTTTAGTGCAGCTGAAACAAAATGGTGTGTCGAGAAACGAACCTATCCT
TATTGTTGGCGGGGGCGTTATCTCAGATATTGGTGGTTTTGCAACCGCCC
TTTATCATCGAAATACGCCCTACGTCATGTTGTGTACATCCATTGTATCT
GGTATTGACGCCGGACCTTCACCCCGAACATGTTGTGATGGATTCGGGTT
TAAGAATCTGTACGGTGCATATCACCCGCCCATCTTGACGCTGACCGATC
GTTCTTTCTTCAAAACACTTCATGAAGGCTGGATTCGACATGGTGAGTCA
TTGAAATACTTTTCATTATTCCTTATAGTTTTCTTCTATATGCCGCATCT
GTATTCGATATATTAACGAACTTTCCTACTTTCAGCTACATAAAAACAAC
GAAAAGAGCATGATTTATTTTGAAATTAACTTATTGTTTAAAACAGCATT
GACAAATTTAATATGCACTCCCTAAAGACCGTCATCAATCTTGAAAGTGC
AGTCAGTCGTCACAAATAATGATTATTTCCAATGACGTTGAAGTGTCTTG
GCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCTCTTAGAGAATGAAGTC
CTCTGAAAATTGGACCTGTAAGACTCTTTTGTATTTTGAAATGAGCGTAT
TTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCCTAACTATTTTCCATTT
TTTCAGGAATCGCTGAGATTATCAAGATGGCTGTTGTAAAAGACAAAAGT
TTATTCGAATTAATTGAGAAGGCCGGACCTCGATTGATTCGTACGAAATT
CGGAACGGTTGGCAACACGGACGCCGAATTCGAAACGTTGTGCGATCTTA
TCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGGAATACGGAAACCTT
TGGGAGACACATCAATGCCGACCTCACGCTTACGGCCATACGTGGTCGCC
TGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACACGCTGTTGCCACAT
GTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAAACTTCATCACGGCA
GAGGAATGCAGCCGTATTTTACGTTTGATCAGTACAATGGAGTTATCCCT
TTGGCATGACATTATGGATAACCATGATTTGGTTGCTGCCGCAAACACCA
AGGTCATNTCATTATTCCTTATAGTTTTCTTCTATATGCCGCATCTGTAT
TCGATATATTAACGAACTTTCCTACTTTCAGCTACATAAAAACAATGAAA
AGAGCATGATTTATTTTGAAATTAACTTATTGTTTAAAACAGCATTGACA
AATTTAATATGCACTCCCTAAAGACCGTCATCAATCTTGAAAGTGCAGTC
AGTCGTCACAAATAATGATTATTTCCAATGACGTTGAAGTGTCTTGGCAA
AAATAGGCTGCTACCCCTCTTTCGGTCCCTCTTAGAGAATGAAGTCCTCT
GAAAATTGGACCTGTAAGACTCTTTTGTATTTTGAAATGAGCGTATTTTG
AGAAAAAGTCAGAAAGGAGGAAAAAATCCCTAACTATTTTCCATTTTTTC
AGGAATCGCTGAGATTATCAAGATGGCTGTTGTAAAAGACAAAAGTTTAT
TCGAATTAATTGAGAAGGCCGGACCTCGATTGATTCGTACGAAATTCGGA
ACGGTTGGCAACACGGACGCCGAATTCGAAACGTTGTGCGATCTTATCAT
TGGTAAAGCTATGGAAGGATACGTTCGTTCGGAATACGGAAACCTTTGGG
AGACACATCAATGCCGACCTCACGCTTACGGCCATACGTGGTCGCCTGGT
TACGAGCTTCCCGCTGGCATGCTTCACGGACACGCTGTTGCCACATGTAT
GGGGTATGGAGCTTATTTGGCAAAGTTGGAAAACTTCATCACGGCAGAAG
AATGCAGCCGTATTTTACGTTTGATCAGTACAATGGAGTTATCCCTTTGG
CATGACATTATGGATAACCATGATTTGGTTGCTGCCGCAAACACCAAGGT
CATCGAGAAAAGAGGTAGGCTTTATGTTAGAAAGAAAGTGTATTGTGTCT
TTAAACATGGTGTGCGAGCGTTGCACATTTGCAAAACAGACTATAAAACC
ACAGATATCTAAGCCCGAAGGGCTAGATAGGCAACTTTAAGCTTTCTCCA
GCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTCGTGCCGATGG
ATAGGATCTAGCATTTTAATTGTTTTCGGAGCGCGAGATCAAAAACGTAG
GCGAAAAACGCTATTTCACATCTCTCAAACCGGTGAAATTGCATATTTTA
GTCACGTGACTCTGGTAGGAAATCCTTCCAAAGATGAGCTTCACTTTTTG
ATAAAAGCCGCAAATCTAGCCCTTCGGGCTTTACAGATATCTGTGTATAA
AACAACATAAGGTTTCGATGGCCAACATATTTAGAACAAGTGAAGGACAA
TTTAAGCTTTAATGGACTCTAAAACACCCAATTTTTTAGAAAATCTAACA
AAAATAATCACAAAATGGATGAAATTAAGAACAATTTTTGCCTTACAGCA
TAAAAGGCTAAGAACATCCAAAAACAAACACTCAGTTTAAGCCTGTGGTG
GCTGTTTGCGACAGCTAAAGTGAGATTAATATTGCAAACCACAATATAAT
GATAGTTATTTTGTTATCAAAGGTAATAAACAGAGAAACAAACGCTAAGA
GGGATAAAATTTCGAGCAATTGTTGTTGCTGAGAAAATTGATTATATATT
TCGCTCGCTCGATTGTTTTTCTAGAGCTCAAAACTAGAGTAACATTTTGA
TAGATTTTATTTATTTCGAAAGTTATGCAACTGTATTTTTTATCTCTCTC
GTGGGTCTTGTCAATGCAATTATGTGATTACTTCAAAAAGCATTTTACTA
AGGAATGAGCTTCGTGAAAATTCTGATCGAGGTGAGAGAGAGAATGTAGC
ATGTTTGAGACAAGGCATTCGTTGAGAGAATATTTATCGAAATTTTTTTC
TGTTTAATTCTAAAGATTCTTTTGCAACTTTCTCCTGCTACAAAACAAAT
CTGGCTCTAAATATTTTCTGTTATACTGGTGGCGAAGTCTAGATTACCAT
ACATACCCCCTTCTCACAACGTTTTGAAGTGACACAATCATAAACTGATT
ATCTAAAAAATTGTTTCATCTCTAAAACATTCTTTGAGAACGTTTATCCA
TCCTACGATACAGAAGTGGTTCGAAATTTATGACAATCGTCATCCTACTT
TCCCAATTTCGAACAAAATATTTTTTTCACCACCCCTGTATCAATCACTT
AAACTTGTTTTGGGTTACAAAGGTGTAACTCGTTAATTTACAGTCAAAAA
TATTGAATCCTTCTAATGATATTGTATCTTTCTCATCTCACAGGTGGCAA
TCTTTGTGCACCAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACG
AGTTGTCACGTGATACCATTAACCAGACATTGGATGATTACAAAATGCTG
TGTCAGCAATTTCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGA
TGTAGGGCTGGAAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATG
TTTTGCAATCTAATGGTGCACCAAAGGTATGTTTCTTTCTTTGATTTCAA
TGCTTTTAGAAACTGAAAAACTTCCAATTAAACGCAACACTAATTTAATT
CAATCGGTTCTTCATGATCGCGATTCTTAAGTTTTGTTTACTTCTCAGTT
CTATTTTCTATTAAATCCATGGTCAAACACTAGTCTATGAACCACTGAAA
TTGTGTCAAGATCGGAATAAAAAAGTATAGCAAAATATAGAAATTTGGGC
TATTTTGCAGTCCTCCTTTGGTGTTTACTGCTTCTTCCAAAGAATGATGA
TGATGGTCATTTTATGAAAAAATAGTTAAATTTTGTCGATTTAGCCTTTA
AATATTCTGCATAAAAAGTATTTTTCTTGTTCTTATAGCATCCAAACGGA
AGTGCAGAATCCAACCCTCCGTCATCTTACTCCGAATGGATCAAAACGGT
TCAAACAGAGCGGAACAGTGAATGGCAAATGAACGTCACTTTCCAAAAAG
CCCTGGATACTGAATCCCCTCCTGATTTCAATCACTTCAAATTGTTTCAT
GATGGCGTCGAAACATACGCCATGGCTCAAACGACCATCCCTTCAAAAGG
TGTCCAAAATATCGCCAATTTGACGCAAAACAACGAAATGTTTTCTCCCT
GCATGGTTGGTTCGCTTGAGAGTCAATTCCTAAAAATGCAATGCCAAATC
AAAGGAGCTCGCAACGTGCTGGATGTCGGTACGTTTACTGGAATGTCTGC
TTTGGCGATGGCTGAAGGAATCCCCGATGATGGTCAAGTTGTCACTTTAG
AATGTGATGAAAAAATTGCTGACGTTGCACAACAAGCTTTTTCAGCGTCG
AAAGTCGGTCACAAGATCCGTCTCGAGTTAGGAAACGCCCTTCAAAGTAT
GAAGAAATTGGCAGCAAACGGCCAGAAATTCGACGTCATTTTTCTTGACG
CCGATAAAGAGAATTACATCCTTTACTACGATCTAGCCATGGATGAAGGA
GTGTTAGCCGAAGGTGGAATTATCTTAGCTGATAATGTGTTGTGTTCTCT
TTTGTACGACAAGAAAGATTTTCGAAGTCAGAAGCTTCACGAGTTCAACC
AACATGTGAAGAATGACGATCGGGTGGAGCAAGTTGTTTTGACCGTACGG
GAAGGGATCTCTATCATCAGAAGGCGTTAAATAAACCGCTCATTCATACA
GACACATTCAGAGAAGAAATTTTAGATTTCAATTACATATTCCAAACAAC
ATTATTATTTTCACGTTATTTTTTGTAAATAATTTTTTTTGAAGGTTTCA
CCAAATTCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGAACAG
AAAAATTTTNTTCTTTTCTTGCATCAGCATTTTTATGTCACTTCTTTTAT
CAAAGAACAGAAAAATTTTGAATTCTAAATTTTGTAAATGATTTTCCTTT
ATATCTGAAGTAATCATTGTCAAGCAGTTAATAGGTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073808-exon-scaffold_98-1575043694:17719..18650TCONS_00073808-exon-scaffold_98-1575043694:17719..18650Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:12809..13295TCONS_00073808-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:11991..12394TCONS_00073808-exon-scaffold_98-1575043694:11991..12394Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:11087..11144TCONS_00073808-exon-scaffold_98-1575043694:11087..11144Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:9475..9707TCONS_00073808-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:8005..9112TCONS_00073808-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:17719..18650TCONS_00073808-exon-scaffold_98-1510915933:17719..18650Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:12809..13295TCONS_00073808-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:11991..12394TCONS_00073808-exon-scaffold_98-1510915933:11991..12394Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:11087..11144TCONS_00073808-exon-scaffold_98-1510915933:11087..11144Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:9475..9707TCONS_00073808-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:8005..9112TCONS_00073808-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:17719..18650TCONS_00073808-exon-scaffold_98-1491911889:17719..18650Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:12809..13295TCONS_00073808-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:11991..12394TCONS_00073808-exon-scaffold_98-1491911889:11991..12394Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:11087..11144TCONS_00073808-exon-scaffold_98-1491911889:11087..11144Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:9475..9707TCONS_00073808-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:8005..9112TCONS_00073808-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..18650 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26106	0	0	0	2.0962	1.46163	3.92569	9.66895	0.747378	2.68792	0.898593	0.768963	0	0	0.045093	0	0	0.339103	0	0	0.174141	0	0	0.191308	0.562871	0.230401	1.57405	0	0	0
Blast
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BLAST of TCONS_00073808 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.241e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 3 
Query: 2379 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2882
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255
The following BLAST results are available for this feature:
BLAST of TCONS_00073808 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD17.241e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
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