TCONS_00073808 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073808
Unique NameTCONS_00073808
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073808 ID=TCONS_00073808|Name=TCONS_00073808|organism=Clytia hemisphaerica|type=transcript|length=3222bp
TCCACCGATTGAGGTTTTGAAAGTCACCCTGAAAACCTCTTTAAAATAAA
AGGTGTCTTATAAGTTTATATCGGATAATTTGTGTATACAACATAATAAC
ACGGGGGTATATTTTCCCCGACGTTTTATACAGATTGTTTTGCAATTTGA
CTTTTGGCTTAATTTCGTTGAAGGGAGTTCACAATGGATGAATTGTGCGT
TTTGTTGTTGCGTTGGTATAAATTGGCCCAAGTTCGGAGGCTCGATGTCA
ACCCAACCACACCTGCGAAGAAAAGGCTTGAAATTCATCATACGCAACCA
TGGTCAAGAAGGAAGAAATCAATACCATCCAATACTACAGTTTGAAAGCT
GTCGATGGtgaaaaagtgaagaaattacTTCGAAACACAATCAATGCTCT
TTCAGAGAAAGAATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCACAG
ACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTCACAG
CTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGA
CATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCTCTGA
GTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTC
AATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGA
AAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAA
TGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATT
GACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATGGATT
GACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTT
CAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATCCTTCAAAC
AAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCAT
TGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCG
ATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTC
GACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAA
TGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCT
CAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTAC
GTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCACC
CCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATC
ACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCAT
GAAGGCTGGATTCGACATGgAATCGCTGAGATTATCAAGATGGCTGTTGT
AAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATTGA
TTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAACG
TTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGGA
ATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGGCC
ATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACAC
GCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAAA
CTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAGTACAA
TGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTGCT
GCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTTTGTGCACC
AGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGTCACGTG
ATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAGCAATTT
CCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGGGCTGGA
AGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGCAATCTA
ATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCA
TCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATG
GCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTG
ATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATG
GCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGAC
GCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTC
AATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGAT
GTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCC
CGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACG
TTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTC
GAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCA
GAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTT
ACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATC
TTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCG
AAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGG
TGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGG
CGTTAAATAAACCGCTCATTCATACAGACACATTCAGAgaagaaatttta
gatttcaattACATATTCCAAACAACATTATTATTTTCAcgttatttttt
gtaaataattttttttgaaggttTCACCAAATTCTTGCATCAGCATTTTT
ATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCAT
CAGCATTTTTATGTCACTTCTTTTATCAAAGaacagaaaaattttgaatt
ctaaATTTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAG
CAGTTAATAGGTTGTATTCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..18650-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073808 ID=TCONS_00073808|Name=TCONS_00073808|organism=Clytia hemisphaerica|type=transcript|length=10646bp|location=Sequence derived from alignment at scaffold_98:8005..18650- (Clytia hemisphaerica)
TCCACCGATTGAGGTTTTGAAAGTCACCCTGAAAACCTCTTTAAAATAAA AGGTGTCTTATAAGTTTATATCGGATAATTTGTGTATACAACATAATAAC ACGGGGGTATATTTTCCCCGACGTTTTATACAGATTGTTTTGCAATTTGA CTTTTGGCTTAATTTCGTTGAAGGGAGTTCACAATGGATGAATTGTGCGT TTTGTTGTTGCGTTGGTATAAATTGGCCCAAGTTCGGAGGCTCGATGTCA ACCCAACCACACCTGCGAAGAAAAGGCTTGAAATTCATCATACGCAACCA TGGTCAAGAAGGAAGAAATCAATACCATCCAATACTACAGTTTGAAAGCT GTCGATGGTGAAAAAGTGAAGAAATTACTTCGAAACACAATCAATGCTCT TTCAGAGAAAGAATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCACAG ACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTCACAG CTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGA CATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCTCTGA GTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTC AATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGA AAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAA TGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATT GACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATGGATT GACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTT CAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAGATCCTGTT TTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCCATATAGTA TACTTTTATTCTTGATCAAGGCCAAATGATTTGTAAGTTACCAAGTGAAA CGATCCAAATTGCAAATACTTCTTCAAGTATGTCTTAAGACAAAACACTT TTAACGGTTTAATAAGTGGTAGAGTCTAACGGCTGTGAACCCGTTTGTGA AATTTCTTTTACTGTACTTATTTCTTAGAAATGGGGTATGTCTTGGACTA TAGCATAGTCTAGTGCGTAAGGTGACCTTTTGCCTCTTAACTCGCCAGTT AAATGAGTTTGGGAGTTTGTNGACCAGGTTTGTCACAGACGTTCTTGATA CACGTTCACTCGCTGAATTATTAATCTATGTTTCACAGCTACCAGTTTTT AGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGACATCCTTGCTTT GATGAAGAAATTCAAATATTACAATAACCTCCCTCTGAGTCAAATCCTCT GCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTCAATGACACTTTC GACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGAAAACCTCAAGTT GAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAATGTCGACTGGCT TTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATTGACCCACACGCA GTCTACCCAACCAGTATTTACCGACATTGCAATGGATTGACGTTGGCAGC AGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTTCAATAACAACAT CTATCAAAATCACTAATAAGGTATGCGAAGATCCTGTTTTGTCTTCTGCT CCAAGATATTCCTTTTTATATGTTTATTCCATTTTATAGTATACTTCTAT TCTTGATCAAGGCCAAATGATTTGTAAGTTACCAAGTAAAACGATCCAAA TTGCAAATACTTCTTCAAGTAGGTCTGATATCTAAAGACAAAACACTTTT AACGGTTTAATAAGTGGTAGAGTCTAACGGCTGTGAACCCGTTTGTGAAA TTTCTTGTACTGTACTTATTTCTTAGAAATGGGGTATGTCTTGGACTATA GCATAGTCTAGTGCGTAAGGTGACCTTTTGTCTCTTAACTCGCCAGTTAA ATGAGTTTGGGAGTTTGTTTGCTCCGTCTCTGGATTCTTCGGGAAGTGTC TTCTGTCTCCCGATCCCTAGCCTGGTTAACCAAGCCGGTTTTTACAAGGC CAAGAAAGATACGGCTGAAGACCATATAGCATTATCGGTGCTTTAATGAT TTTTATGATGTACGGAATTTTAATTTTGCCTTGAAAAAACTGGCTTACGC GAAGCGCGCGTTCATATTTTGAACGCAGAAGTCGGTGAGACTCGGCGAGC ATTTGGCCTCTTCTAATTGGTCATAATACACCATGTGATAAGAAACGAAA TTTTTCGTTTGTTTTGAAAACGCTTTTCACTTCTCAACGAAAAACTTTTT AAACATATTTTATTCTGTACTTTTTGCATAAAAAGAAAGATATGTTTTTC TCTCTCCCTCTTTTAATTTGCAAAACCTTTATATAACTGAATGAAAGAGA AGTTCATTAAATAGGGAGGAGGGTGTGTTTATTTAACAAATTCCTTATTT TTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TTCTTTAACAGAGATTGCACGGGTCAAAGTTACGAAATATGAGCAATGAG GCATTTTACTCCAAAACAGATTTTGACACATCATGTCAAAAGCTAGTAAT TTGACCTGATAATCGAATCAAAAATGAGAAATCAAGTATTTGAAAACTCC CAAAATGGGAAATTAAACAAAGAGTGCCTCTGCTGTATTTGAAAGATGAC GTAAGATGAGAAAGAAAAGTACTATCCTACACAACAGGGAATATATAATA GTTCCTGTGTTGTTATAAAGAAACTCGTGTTAGGTCAAATAGGACGACAC TGCATTTACTAGTCGAAGATTCAGGCCCGAGAATATCCAGGAATTAAGTT TTTTTGAACTGCCAATTTATTTTGTCACCCAGGTAATAAAGGGTTTTAAG CATCACAGGGGCAGATTTGAATTGTCTTTAATAAAAATTGCAGTTAAAGC CTTCGTAATTTCACAAGCACCATGCTTGTGTAATCAAAGTAATTGCCATT GAAGTTAAGCCTAATTTTGGCCCAAACGCTGGGAAACCAGGTTAGAAGCT GGTAACATCGTGTATAAGCGGTTTGCATTTGAATTACCAATTGTTCATCT CTCAGGTGCTTCATCCTTCAAACAAGACATTGATCAACACTTACCTACAC TTTGGGCGTTGCGTCGCCATCATTGACGATAAAGTCATCCTGCACTATGG TGAAGAATTGCAAAAATATTTCGATCATTTCGGTGTTGAGTTGGTGAATT TGATCCATGGTGGTAACGAGGTCGACAAAGATATCAAGAGCGTGGAGAAG ATTTTAGTGCAGCTGAAACAAAATGGTGTGTCGAGAAACGAACCTATCCT TATTGTTGGCGGGGGCGTTATCTCAGATATTGGTGGTTTTGCAACCGCCC TTTATCATCGAAATACGCCCTACGTCATGTTGTGTACATCCATTGTATCT GGTATTGACGCCGGACCTTCACCCCGAACATGTTGTGATGGATTCGGGTT TAAGAATCTGTACGGTGCATATCACCCGCCCATCTTGACGCTGACCGATC GTTCTTTCTTCAAAACACTTCATGAAGGCTGGATTCGACATGGTGAGTCA TTGAAATACTTTTCATTATTCCTTATAGTTTTCTTCTATATGCCGCATCT GTATTCGATATATTAACGAACTTTCCTACTTTCAGCTACATAAAAACAAC GAAAAGAGCATGATTTATTTTGAAATTAACTTATTGTTTAAAACAGCATT GACAAATTTAATATGCACTCCCTAAAGACCGTCATCAATCTTGAAAGTGC AGTCAGTCGTCACAAATAATGATTATTTCCAATGACGTTGAAGTGTCTTG GCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCTCTTAGAGAATGAAGTC CTCTGAAAATTGGACCTGTAAGACTCTTTTGTATTTTGAAATGAGCGTAT TTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCCTAACTATTTTCCATTT TTTCAGGAATCGCTGAGATTATCAAGATGGCTGTTGTAAAAGACAAAAGT TTATTCGAATTAATTGAGAAGGCCGGACCTCGATTGATTCGTACGAAATT CGGAACGGTTGGCAACACGGACGCCGAATTCGAAACGTTGTGCGATCTTA TCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGGAATACGGAAACCTT TGGGAGACACATCAATGCCGACCTCACGCTTACGGCCATACGTGGTCGCC TGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACACGCTGTTGCCACAT GTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAAACTTCATCACGGCA GAGGAATGCAGCCGTATTTTACGTTTGATCAGTACAATGGAGTTATCCCT TTGGCATGACATTATGGATAACCATGATTTGGTTGCTGCCGCAAACACCA AGGTCATNTCATTATTCCTTATAGTTTTCTTCTATATGCCGCATCTGTAT TCGATATATTAACGAACTTTCCTACTTTCAGCTACATAAAAACAATGAAA AGAGCATGATTTATTTTGAAATTAACTTATTGTTTAAAACAGCATTGACA AATTTAATATGCACTCCCTAAAGACCGTCATCAATCTTGAAAGTGCAGTC AGTCGTCACAAATAATGATTATTTCCAATGACGTTGAAGTGTCTTGGCAA AAATAGGCTGCTACCCCTCTTTCGGTCCCTCTTAGAGAATGAAGTCCTCT GAAAATTGGACCTGTAAGACTCTTTTGTATTTTGAAATGAGCGTATTTTG AGAAAAAGTCAGAAAGGAGGAAAAAATCCCTAACTATTTTCCATTTTTTC AGGAATCGCTGAGATTATCAAGATGGCTGTTGTAAAAGACAAAAGTTTAT TCGAATTAATTGAGAAGGCCGGACCTCGATTGATTCGTACGAAATTCGGA ACGGTTGGCAACACGGACGCCGAATTCGAAACGTTGTGCGATCTTATCAT TGGTAAAGCTATGGAAGGATACGTTCGTTCGGAATACGGAAACCTTTGGG AGACACATCAATGCCGACCTCACGCTTACGGCCATACGTGGTCGCCTGGT TACGAGCTTCCCGCTGGCATGCTTCACGGACACGCTGTTGCCACATGTAT GGGGTATGGAGCTTATTTGGCAAAGTTGGAAAACTTCATCACGGCAGAAG AATGCAGCCGTATTTTACGTTTGATCAGTACAATGGAGTTATCCCTTTGG CATGACATTATGGATAACCATGATTTGGTTGCTGCCGCAAACACCAAGGT CATCGAGAAAAGAGGTAGGCTTTATGTTAGAAAGAAAGTGTATTGTGTCT TTAAACATGGTGTGCGAGCGTTGCACATTTGCAAAACAGACTATAAAACC ACAGATATCTAAGCCCGAAGGGCTAGATAGGCAACTTTAAGCTTTCTCCA GCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTCGTGCCGATGG ATAGGATCTAGCATTTTAATTGTTTTCGGAGCGCGAGATCAAAAACGTAG GCGAAAAACGCTATTTCACATCTCTCAAACCGGTGAAATTGCATATTTTA GTCACGTGACTCTGGTAGGAAATCCTTCCAAAGATGAGCTTCACTTTTTG ATAAAAGCCGCAAATCTAGCCCTTCGGGCTTTACAGATATCTGTGTATAA AACAACATAAGGTTTCGATGGCCAACATATTTAGAACAAGTGAAGGACAA TTTAAGCTTTAATGGACTCTAAAACACCCAATTTTTTAGAAAATCTAACA AAAATAATCACAAAATGGATGAAATTAAGAACAATTTTTGCCTTACAGCA TAAAAGGCTAAGAACATCCAAAAACAAACACTCAGTTTAAGCCTGTGGTG GCTGTTTGCGACAGCTAAAGTGAGATTAATATTGCAAACCACAATATAAT GATAGTTATTTTGTTATCAAAGGTAATAAACAGAGAAACAAACGCTAAGA GGGATAAAATTTCGAGCAATTGTTGTTGCTGAGAAAATTGATTATATATT TCGCTCGCTCGATTGTTTTTCTAGAGCTCAAAACTAGAGTAACATTTTGA TAGATTTTATTTATTTCGAAAGTTATGCAACTGTATTTTTTATCTCTCTC GTGGGTCTTGTCAATGCAATTATGTGATTACTTCAAAAAGCATTTTACTA AGGAATGAGCTTCGTGAAAATTCTGATCGAGGTGAGAGAGAGAATGTAGC ATGTTTGAGACAAGGCATTCGTTGAGAGAATATTTATCGAAATTTTTTTC TGTTTAATTCTAAAGATTCTTTTGCAACTTTCTCCTGCTACAAAACAAAT CTGGCTCTAAATATTTTCTGTTATACTGGTGGCGAAGTCTAGATTACCAT ACATACCCCCTTCTCACAACGTTTTGAAGTGACACAATCATAAACTGATT ATCTAAAAAATTGTTTCATCTCTAAAACATTCTTTGAGAACGTTTATCCA TCCTACGATACAGAAGTGGTTCGAAATTTATGACAATCGTCATCCTACTT TCCCAATTTCGAACAAAATATTTTTTTCACCACCCCTGTATCAATCACTT AAACTTGTTTTGGGTTACAAAGGTGTAACTCGTTAATTTACAGTCAAAAA TATTGAATCCTTCTAATGATATTGTATCTTTCTCATCTCACAGGTGGCAA TCTTTGTGCACCAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACG AGTTGTCACGTGATACCATTAACCAGACATTGGATGATTACAAAATGCTG TGTCAGCAATTTCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGA TGTAGGGCTGGAAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATG TTTTGCAATCTAATGGTGCACCAAAGGTATGTTTCTTTCTTTGATTTCAA TGCTTTTAGAAACTGAAAAACTTCCAATTAAACGCAACACTAATTTAATT CAATCGGTTCTTCATGATCGCGATTCTTAAGTTTTGTTTACTTCTCAGTT CTATTTTCTATTAAATCCATGGTCAAACACTAGTCTATGAACCACTGAAA TTGTGTCAAGATCGGAATAAAAAAGTATAGCAAAATATAGAAATTTGGGC TATTTTGCAGTCCTCCTTTGGTGTTTACTGCTTCTTCCAAAGAATGATGA TGATGGTCATTTTATGAAAAAATAGTTAAATTTTGTCGATTTAGCCTTTA AATATTCTGCATAAAAAGTATTTTTCTTGTTCTTATAGCATCCAAACGGA AGTGCAGAATCCAACCCTCCGTCATCTTACTCCGAATGGATCAAAACGGT TCAAACAGAGCGGAACAGTGAATGGCAAATGAACGTCACTTTCCAAAAAG CCCTGGATACTGAATCCCCTCCTGATTTCAATCACTTCAAATTGTTTCAT GATGGCGTCGAAACATACGCCATGGCTCAAACGACCATCCCTTCAAAAGG TGTCCAAAATATCGCCAATTTGACGCAAAACAACGAAATGTTTTCTCCCT GCATGGTTGGTTCGCTTGAGAGTCAATTCCTAAAAATGCAATGCCAAATC AAAGGAGCTCGCAACGTGCTGGATGTCGGTACGTTTACTGGAATGTCTGC TTTGGCGATGGCTGAAGGAATCCCCGATGATGGTCAAGTTGTCACTTTAG AATGTGATGAAAAAATTGCTGACGTTGCACAACAAGCTTTTTCAGCGTCG AAAGTCGGTCACAAGATCCGTCTCGAGTTAGGAAACGCCCTTCAAAGTAT GAAGAAATTGGCAGCAAACGGCCAGAAATTCGACGTCATTTTTCTTGACG CCGATAAAGAGAATTACATCCTTTACTACGATCTAGCCATGGATGAAGGA GTGTTAGCCGAAGGTGGAATTATCTTAGCTGATAATGTGTTGTGTTCTCT TTTGTACGACAAGAAAGATTTTCGAAGTCAGAAGCTTCACGAGTTCAACC AACATGTGAAGAATGACGATCGGGTGGAGCAAGTTGTTTTGACCGTACGG GAAGGGATCTCTATCATCAGAAGGCGTTAAATAAACCGCTCATTCATACA GACACATTCAGAGAAGAAATTTTAGATTTCAATTACATATTCCAAACAAC ATTATTATTTTCACGTTATTTTTTGTAAATAATTTTTTTTGAAGGTTTCA CCAAATTCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGAACAG AAAAATTTTNTTCTTTTCTTGCATCAGCATTTTTATGTCACTTCTTTTAT CAAAGAACAGAAAAATTTTGAATTCTAAATTTTGTAAATGATTTTCCTTT ATATCTGAAGTAATCATTGTCAAGCAGTTAATAGGTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073808-exon-scaffold_98-1575043694:17719..18650TCONS_00073808-exon-scaffold_98-1575043694:17719..18650Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:12809..13295TCONS_00073808-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:11991..12394TCONS_00073808-exon-scaffold_98-1575043694:11991..12394Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:11087..11144TCONS_00073808-exon-scaffold_98-1575043694:11087..11144Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:9475..9707TCONS_00073808-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1575043694:8005..9112TCONS_00073808-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:17719..18650TCONS_00073808-exon-scaffold_98-1510915933:17719..18650Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:12809..13295TCONS_00073808-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:11991..12394TCONS_00073808-exon-scaffold_98-1510915933:11991..12394Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:11087..11144TCONS_00073808-exon-scaffold_98-1510915933:11087..11144Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:9475..9707TCONS_00073808-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1510915933:8005..9112TCONS_00073808-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:17719..18650TCONS_00073808-exon-scaffold_98-1491911889:17719..18650Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:12809..13295TCONS_00073808-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:11991..12394TCONS_00073808-exon-scaffold_98-1491911889:11991..12394Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:11087..11144TCONS_00073808-exon-scaffold_98-1491911889:11087..11144Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:9475..9707TCONS_00073808-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073808-exon-scaffold_98-1491911889:8005..9112TCONS_00073808-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..18650 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26106 0 0 0 2.0962 1.46163 3.92569 9.66895 0.747378 2.68792 0.898593 0.768963 0 0 0.045093 0 0 0.339103 0 0 0.174141 0 0 0.191308 0.562871 0.230401 1.57405 0 0 0
Blast
BLAST of TCONS_00073808 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.241e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 3
Query: 2379 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2882
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255          
The following BLAST results are available for this feature:
BLAST of TCONS_00073808 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD17.241e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
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