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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073666 ID=TCONS_00073666|Name=TCONS_00073666|organism=Clytia hemisphaerica|type=transcript|length=410bp
AATAAATGAGGAAATCTGTAAGTTGGAAAGGCAATGTTATGGGGAGGGCC
AACAAGCAAGACAATCAGCCTCACATGTTTTAGCTTTTATTGTACTACTT
ACGAGCTGGACAAACACTCGATCAGTTGGATCCGTGTGGTACAACTCTGG
GAGTTCGAGAATACCATAATCCCAGGGCTTTACATGATCAAATTAAGAAG
AGAACACATCGACTAAATAGGATGACATTTAAACTTGCAGCTCAGGTAAC
TTCCATATGAACTCAAAAATTTTGCTTATGTTACTAAGCATACAATTATA
CAACAGTTATCATTTTTTATACCTATTTTTCCTTCTTATTTTTGACCATG
CTAGGTGAAGTCTGAGAATTAGGTCTGTCTGAAATAAAATGGCTTTTTAT
GACAATAAAA Run BLAST on NCBI transcript from alignment at scaffold_97:569645..570621+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073666 ID=TCONS_00073666|Name=TCONS_00073666|organism=Clytia hemisphaerica|type=transcript|length=977bp|location=Sequence derived from alignment at scaffold_97:569645..570621+ (Clytia hemisphaerica)
AATAAATGAGGAAATCTGTAAGTTGGAAAGGCAATGTTATGGGGAGGGCC
AACAAGCAAGACAATCAGCCTCACATGTTTTAGCTTTTATTGTACTACTT
ACGAGGTATCTACACTggatttacttttgtttttgttttttccctaCTGC
ATCTGCTTCAAGTGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCAAGATAAAGTCCATTTCTTCAGTATTAATCTGA
TGTGCTTTGGatagaaagctctatttcatTTGTGAGTAtacaaaacaatt
ttgaaaactctCATGGAAAAAGAAGCACCAAAAACTTTTGTAAATCAATG
GTTTGTCTATTATTTCCAGAGGATATATACCTTAGATATTATTAATGATG
ATTTGTTTGAATAGTATTATCACTACCAGgtgttaaaattcaaaaaaata
attgggTTTCCTTTCCTTTTAGCTGGACAAACACTCGATCAGTTGGATCC
GTGTGGTACAACTCTGGGAGTTCGAGAATACCATAATCCCAGGGCTTTAC
ATGATCAAATTAAGAAGAGAACACATCGACTAAATAGGATGACATTTAAA
CTTGCAGCTCAGGTAACTTCCATATGAACTCAAAAATTTTGCTTATGTTA
CTAAGCATACAATTATACAACAGTTATCATTTTTTATACCTATTTTTCCT
TCTTATTTTTGACCATGCTAGGTGAAGTCTGAGAATTAGGTCTGTCTGAA
ATAAAATGGCTTTTTATGACAATAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073666-exon-scaffold_97-1491911889:569645..569749 | TCONS_00073666-exon-scaffold_97-1491911889:569645..569749 | Clytia hemisphaerica | exon |
| TCONS_00073666-exon-scaffold_97-1510915933:569645..569749 | TCONS_00073666-exon-scaffold_97-1510915933:569645..569749 | Clytia hemisphaerica | exon |
| TCONS_00073666-exon-scaffold_97-1575043694:569645..569749 | TCONS_00073666-exon-scaffold_97-1575043694:569645..569749 | Clytia hemisphaerica | exon |
| TCONS_00073666-exon-scaffold_97-1491911889:570317..570621 | TCONS_00073666-exon-scaffold_97-1491911889:570317..570621 | Clytia hemisphaerica | exon |
| TCONS_00073666-exon-scaffold_97-1510915933:570317..570621 | TCONS_00073666-exon-scaffold_97-1510915933:570317..570621 | Clytia hemisphaerica | exon |
| TCONS_00073666-exon-scaffold_97-1575043694:570317..570621 | TCONS_00073666-exon-scaffold_97-1575043694:570317..570621 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:569645..570621 + |
Blast
The following BLAST results are available for this feature:
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