TCONS_00073526 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073526
Unique NameTCONS_00073526
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1269

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073526 ID=TCONS_00073526|Name=TCONS_00073526|organism=Clytia hemisphaerica|type=transcript|length=1269bp
TATTCCCTGCATTCAACTTTTTGGAGATTGAACCTTCATCTTATCAATCA
TGCTCCGACTTATCTTTAGTCTAACACTTCTAATCATTGCAGTTCacgCT
TGCTCTGACAAAAACACAAAGTGTCCAAAATGGAAGGACGACCCAAGAGA
TTTGTGCAATACACATGaatacgtcatcaaaaattgcaaGAAGTCTTGCG
GCAGATGTGGAGGCTCAGCTACCTGCGCTGACAAAAACGCAAAATGTCCT
AAATGGAAGGACGACCGAAGAGATTTGTGTAATACACATGAATACGTCAT
CCAAAATTGCAAGAAGTCTTGTGGCAGATGTGGAGGCTCTGGTGGTGGTT
CAGGCGGAGGCtctggtggtggtggtggttcAGGCGGATCCACCGGTGGA
TCGGAAGGAAAATGTGGCGTTTCACGGGCGGCCCAAAGTCGAATTGTTGG
AGGGACCACAGCCAGAGCTGGTGCTTGGCCGTGGCAAGTTTCTTTGCAAA
TTTATAACCAACACTTTTGCGGTGGAAGTATCTTGACATCAACCTGGATT
TTGACTGCGGCACATTGCGTCGATGACAAGACAGAACGACCAAATCAAGT
CTACGTTATCGCTGGTgctcaaaacataaaaattaccGAATCAAGTCAAC
AGAGGATAAGAGCAAGGAGAATTATAATGCATCCATCGTTTCGCAGGGAT
GAAAATAACACACCTATTAGCGATATCGCCCTTATCCAACTTTCATCAAA
ACTGAACATGAATGATCGCGTCGTAAGAGCATGTTTACCGCAACAAGGAG
TCTACCCAACAATTGGAAAAAGGTGTTACATCACAGGCTGGGGTGATCTG
TCTTTCGAAGGTTCAAGTCCTGCTCGATTACAACAAGCTAAATTGCCGGT
GATCAGATCAGATGGTGAAACTGTGGATGTTGGATATAATAGCCCAAGAG
AAGGTGTATCCAATGCATGCCAAGGTGATTCTGGTGGTCCCCTGAGTTGT
CAACGTGATGATGGTACATGGCAAGTTGAAGGTGCTGCAAGCTATGTTCT
AAATAGATGTCAATACCTTAGTGCGTATGCGCCACTCAATAAATATTTGA
GTTGGGTCAAAAGATATGTGCCTGGCTTGTAAATATTGTTATGCAGGTGG
CATTTCTgttttggactcaaaacaccATGTGGATTTGGAAATTGTCTGTT
atcacccagctggcacataaagTTTTTTCGACGTCTATCTAATGTTCGCA
ACGTCCATAACGATAGaag
Run BLAST on NCBI

transcript from alignment at scaffold_94:139990..150033+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073526 ID=TCONS_00073526|Name=TCONS_00073526|organism=Clytia hemisphaerica|type=transcript|length=10044bp|location=Sequence derived from alignment at scaffold_94:139990..150033+ (Clytia hemisphaerica)
TATTCCCTGCATTCAACTTTTTGGAGATTGAACCTTCATCTTATCAATCA TGCTCCGACTTATCTTTAGTCTAACACTTCTAATCATTGCAGTTCGTaag tttattttatattcaCAATTAACCTAAAGTCtatctcaatataatctgca gtggagacaaaaaggctgtaactttagAGATGGTATTCAAATTAGATAAG ATAGCGGGTTTGTTTTtgctcattgaaaagataatcgaTGAATAAAGCAG aagttttatcaaaattgaaaaaagaagatgaaaactGAAGAGGGGGGGGC CGAACGGGGTTtgtgatttccgaaataccgaataattttgccaaaatttc ccaaattccgtaaaaaaattcttgcaattccgataccaatttttttgggt atttttcctcgttttgacaaattttttatcaaatttgatttttcatgtat gaattccggaAAAGgaagataaaaactttataacaaaaaaaagttttata gcaaaaattcatggatttccgataccgaaacaatttcagaattccgaaat accgaaggaattttgcccgatttccgaaattccgaagaaaaaaggtaCGC CCCACCTTATTTGGTCAGAATCCTTTGGAAGCATTATATTGACTGCATTG ATNAGGTACGATTTCCGCACGTTTctgcaattccgaaataccgtacgccc cctaAAGAAGGCAAAAGTAAACTAGGGTATAATAAGGTACCGCTTAGGGA AAGAAAGTTCTTCCAAGGTGAACTGATGTAGAAGAGAAATTTCGAAAACA AttctttttatcattattaacatttttttttttctaaagacgCTTGCTCT GACAAAAACACAAAGTGTCCAAAATGGAAGGACGACCCAAGAGATTTGTG CAATACACATGaatacgtcatcaaaaattgcaaGAAGTCTTGCGGCAGGT GCGAAGGtaagttttaaaattcattaCAGGACTTTAATCGGAATAATTTT CAATATCGTGAGCCAAAAAAAGAACCGCAAAATTTTGTGGATTCATTTTT ACGGATcagcattttgaaaaattttaattgcattttaattgcattttaat tgcatttttaTTGCTGCTCAATCGAAAACTCCTAAaatctattcacgata agtgtgcactcatttttcttttacctataacttttgaaggaattctttaa tctttatgaatttggtatcattggaaagttattattagtgagtggaacga tttgaaataaaaaatcttttaaataattctaaaaatgaagatgaaaatga gaagaaaaaaatgaagatcttgtagaaaagtgcaataactatcattttca cagaagtgaatccttaatcatcgaacgtcatcactgtgaaaaagattctc aaaaataatcattcagtcaaaagatatcaaacaaaggttgcatcaaggat ttattatacactggatatacaagtaacagatttttgccgatttctcgtgt actagctatgtccgcagtaatgatattattgttcactcttcttccctcat taaatgatttttcgaagcatttttattgcatttcttatcgaaaatcactc atccaactcccaaaagagacttaaaactttcctgtgagagtcagattctt ccacttaattgctaattacaagtcgttatgacgtttcaagctgtttAAAA GATGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNtaaaagatgcaaaagacgtgttgtgtataaga aattttatGTTGACACCGGGAagtttcaaacttcaacctcaaaaaaacca ccttgccaccacgtgcctcccaaggattttcataccacagtggagccaag acactcaagtcttatgtatatTAATTTCAgttcttctggggacagtcttg gaaagatatttccaattgaaaatttcgtgtcattataagcattttgtctg aatttctggtctaatgatgtttttctcacattagattttaCAGATGTATC CTGCTTGGTATGCTAGCcctactttcaaacttttttatgcaaatgtacaa aaagaaagagctagagaacttttttaaaataagactgataaacatttttt taaatcagacatctccgagccgccatgacagttgtcctttgcggacaaag ctagaacatcaattgttttctgaaacaatgaaaatacaatgatcgctctc caccGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNttcaaaatggtagcctagCTGA AGAAAACATTAAAGCTTAGGCCTTATGCATGCGTGCGCTTAGTGAACTAG TGTGAACAAGGTGTAGTGCTTGGTTACAAAAATGGTGTTTAgcaaaacta aaaatcaaatgGTGCAGTTTGTTGGCTAAACCCTCGGTTTAGCGAACgaa gaaaacacagaaaaaagacTGTTGGCTTTGATCGTCTGTTTAGGTAAACT TTTAGATGAATCAATGCGTTCGCTAAACcctctgtttcacttttttgggt ttttggctaAATGGTATGCACCCAAAgatataagctgattgacgtctaaa aatgctgttttctgctgttttctgctgtttttggggtcaatcacttatta actttgtatcgtaactttatattgaaaataaatatttttagtgaaatttt ttcacagtgatgacctcctaagatcacagaatctctccagtgaaaatgaa agttattatccatatagcggtcattaagtaagccattaaagattcgaacg gcgggcggtattgaaaggttctatgactcaaatagtcatacccgcgctga ggaaACAAGGGTGTCGtccttcagagggctgaaatatcattaaccgccct ggttatagggcgataacgtcatttgcggcccgctcggaactttattgaag tcgttgcattgaagcgatgagactaaaccgacgtcagaaaataacacttt ttggtcatttgcggcccgctcggaactttattgaagtcgttgcattgaag cgatgagactaaaccgacgtcagaaaataacactttttggtcatttgcgg cccgctcgcaagggtactcaaaacttgttgaagtcattgcattgaagcga aaagacttggctgacgctagaaaaaaacgtgtgtGTGGATTTaacagaaa ataacaacaacgacctcaaactgaacgctattgttatattatagcacttt tctacaagatcttcatttttttcttcttcattttcatctttatttttgta atttttttaatttgttgaaGCAATGCTTTCATCCATCAAAAGAGTGCTTA ACCAACCGAAGTTAGAAGCGTTATATCGTAGTTAAAGTATATaatgaaaa tcattttttcaatactggcagtttcatttttttacaaacaatcctcagtt gaaaataaattttttaaaaactagagttccgttgctcttacaaaaaaata acactGCAGGGTCTTCGTAagaaattgacgtcattttagtCCTTGGTGTC GTGAACTTTTAAAGTGAACTTGTTCACGTGACGGCATTTTGAAATCAGTT CATTCCTGGAAGAATGACCCCCAAGAATGTACTCCCCCCGTACAACCAGA ACGTTGAAACGAAAGTTGCACGAAGGTTTCTGCAACTCATAGATAAGTAC TTTCCAAAACACCACATACTCAACAAAATATTCAACCGCAACACTGTCAA AGTCAGCTATAGTTGcaccaaaaacatgaaaaatatcataCAGAGTCACA ATAAAAACATCCTGGAAGACGAAGCAAACGAGAACGTAGACAACCGAATG TGTAACTGCAGGGTAAAAGCCAACTGTCCCCTGAACAGATCGTGTTTAGT TGAGCGATCAGTATACCAAGCCACATGCGAGGAAGAACCAGATTACGACG AGAAGTTTTACATCGGACTTGCCGAACCTGCTTTCAAAAAACGTTTTGCA AACCACCGCTACGAAAAAGAGACGGAATTGTCAAAAGAAGTTTGGAGGTT AAAACGAAAAAACCTATCGCCAAAAATCGCATGGAAAACCATCCGNTTTT TTTGTTCGAAAACTTCCTTACAACATTTTCCTACACTGTTTCATTTAATT AAAGCTACCTGCGCTGACAAAAACGTAAAGTGTCCTAAATGGAAGGACGA CCAAAGAGATTTGTGTAATACACATGAATACGTCATCCAAAATTGCAAGA AGTCTTGTGGCAGATGTGGAGGCTCAGGTATGTTGTTAAAGTTAACAAAG GAGGAGGGGAGTAACTAGATAACAAATACTTTAAAGCATTTTTACAAGAT GTGATAATTTGAAATCCTGTTGTTTTTGACATATGTGTTCtaaatataaa ttaaatttcttgGCTTTCAAATTAAGGATCTTGCGAAATTTNGAAATGCC GTCACGTGAACAAGTTCActttaatagttcacgacacaaggactaaaatg acgtcaatttttgacgaagaccctgcaatgttatttttttgtgagAGCAA CGGAACTctagtttttaaaaaatataattttttaaagatttttttatttc aaattgtcccactcactaatatcttaccaatgataccaaatttataaaga ttaaagaattccttcaaaaNGTTTTgcacttctttttttctttgacattt tttgacttATTTTTCAACTCTAACATTATTCTAAACCGCTGAAAAGATAA TCAAAaaagcattttaattttttaggcAAATAACTTCAAAGATTGGACTT TTTATCCTCTAATTCCAGGAACCTTATTTTTGCTAAACTGGTACTCTTAA GCCTCTGGATATCAGCTATAAAGCCTTTAGAAGCAATTTCATCTGAGTGA AAgacttttttgttgttgctatGTTTGCATCTACGGGCCACATTCTAAAT AAGAACGTAACTTCCGATGCAATAAGTTTATGTTATCTAGCTGAAATCTA GCTGAAATCAGGAggctttacacgtttttttttttttaagaaacacactt ttaagaaacatgaggctcagaatgcctaaaaactaagaaacatctaagaa acatgctgaggctgagaatgagaaaatgacatttttaaaacggttttttt agaaccttccaatctttgcatgaaaagtaggctgattatgtcaaaaaagt ttagaaacatgtaaaaaacatttaaggctcaaaaggccgatttcttaaga aacattgagactgcttggtaaaactagtttcttaaaaaaaacgtgtataa tacGTCTGTttagcaaaaattagttcctagCGTCGAAGGATAAAAACCTA TTTTTTTTCGTCTTCAACTTTCATTTtcgaacatttttgaaatctttttg acaGTCTATGCTTCTTAAACTGCTTTTTCATATAACTTAAGCTACCTGCG CTGACAAAAACGCAAAATGTCCTAAATGGAAGGACGACCGAAGAGATTTG TGTAATACACATGAATACGTCATCCAAAATTGCAAGAAGTCTTGTGGCAG ATGTGGAGGCTCTGGTGGTGGTTCAGGCGGAGGCtctggtggtggtggtg gttcAGGCGGATCCACCGGTGGATCGGAAGGAAAATGTGGCGTTTCACGG GCGGCCCAAAGTCGAATTGTTGGAGGGACCACAGCCAGAGCTGGTGCTTG GCCGTGGCAAGTTTCTTTGCAAATTTATAACCAACACTTTTGCGGTGGAA GTATCTTGACATCAACCTGGGTAAGTATCTTATCCGGACAAGTATCTCAG ATATGATTCTAANGCACTTTTGCGGCGGAAGTATTTTGACATCAACCTGG GTAAGTATCTTATCCGGACAAGTATTTTGAAATATCTCAGATATGATTCT AAATATAAGTTTTTTAGTTTCTAGccaaattttaaatctttttgttccta tgaaaattttctataccttaaaggaagaaattttagcaggaatttaattt ggcggatggccggaaaagttttttagagggaatttaatttggcggacgga cgcaaaaactaaatttgccgggaatttaatttggcgtttgctgaaaaatt tatccttaaaatggtgtaaaaacggtaaaaataatgcaaaaacactttaa aaaaatttaatttggcgggaatttaatttggcggattctggccgAATCcg ccaaatctgccaaattttctttccgccaaaatttcttcctttaagtaGCA TTTTCTTTGTATGTAATTTGAtatatttcgatttgggaggagTTTAGTTT CTTTCAGTCTATATTCTCTGCCTTATTGGTACCAATATTTGAGCTTTTGA ATCCTGAAATCGTACGAGTAAGTTGATTATTTCTGACTATAATCGAAACC GACAAATAGAGCATAACAGTAAAGATGTAGACCATTTCATTCTCAGATTT TGACTGCGGCACATTGCGTCGATGACAAGACAGAACGACCAAATCAAGTC TACGTTATCGCTGGTgctcaaaacataaaaattaccGAATCAAGTCAACA GAGGATAAGAGCAAGGAGAATTATAATGCATCCATCGTTTCGCAGGGATG AAAATAACACACCTATTAGCGATATCGCCCTTATCCAACTTTCATCAAAA CTGAACATGAATGATCGCGTCGTAAGAGCATGTTTACCGCAACAAGGAGT CTACCCAACAATTGGAAAAAGGTGTTACATCACAGGTAAGACGTTTTCAA TTCTTGAATAATCATACTTACTGATAAATATGTTCTTAATCATTTATTGA CCCAGCGGCGCGCGCAATGGGCCTTTGAAACACAACTGGTCGAAAATATT TGACTTTGTCGGGCTCAAACCCTGGTCGGGGCCTATGCGTGCGCAATTAT GAATCGACGATTTCAGGCTAAAATCGAACTACCTGACTTTCTATTGTGTG CATGTGTGAGAAGTAATTAATACCTCCAACTTATatggtcaaatctttct ttcttaacTAGTAACAAAAGTTTAAAATAATTAAATCTTTATTACTCGCC CGACTCGAGTctatacattgaaaaaaaatcgctCCTGTTGTAAGGCGATT CTGCAGCGGAAAAATATGCCAACAGTGCCAACACTGCTGGGCCTATACGC CGCTTAGGATTTCTTCTGTACATTCAAATGGtcattcttaaattttattt caaacaatGTTTCAACCTCCTTAGGTTGCATACCTTTTAATactcaaaac caaaaaaactcaAACCGTTTCGCTAAACtgcaaatggtttgggtttgcTT ACAGTTGAAAATTACGCATGCGCAGTATTATGAAATAGAATTGCGAGAAA GGTCCTTACTCCCTGTGAGTCACACCACTgacctggaccaagcaatatct cccatctttgattggagtttttttggaattggtacccgaggagaagccat tgcaatgttaaaaattaacgtctagtgctgctacatcatcaaaagaattc gaggaaaagtagacctagcgctctcgatgcatttacaccgctatcgagta gtgccgccattagggtaccaatttNctttcgcgaaaagggccacaATTTG CGAAAATcatgaaagtttctgctcgcgaaagtttgtacgcctaaagtggt gccgccattagggtaccaattttcaaaaaactccgatcaaagattttgct tggctgggattgagaagcttggtccaggttatataaaggtcagtgatggT CAAAATGGTAGCATAGCTGAAAAAAACATTAAAGCTTAGGGCTGCGTAAA CAAGGTGTAGTACTTGGTCAGAATAATGgtttagcaaaacaaaaaattga atggtGCCGcgtccaatgaagtataagcccgaagggctagaagtcaatct ccattggtaggatttgaagccaacaaatcctaccaaagttacgcggcctt gagcggctcccctgggttttacacaaatgacagattgaaactaaaattta ccgctaaatttcgaaaaaaatatcaatcgtaaacaaaggaattgctagat tcaatctgtcgtcaaaaatgcggcgcatttttcaaggcttcactttttct tgcctgagaaaggttagagattgaactttaGCCCTTCGGGTCTTAAACTC AATGGCCGCGTCTCTGTTGGCTAAACCCTCGGTTTAGCGAACGAAGAAAA CACATAAAAAAGACTGTTGACTTTGAAAGTCTGTTTAGGCaaacttttaa atgaatcaaTGCGTTCGCTAAACTCTCTGTTTCACTATTTTGGGTTTTTG GCTAAAACCCTTAGTAGAGGTCTTCATTAGGTTTACAAACGTTCAGTTGA GATCGGTGTTTTGACGTCATATGACATCAATGCAATGACCTCAATCTGAT GTGCGAGAGCATTGGTTTCCAGAACCCAGACGTCACATACTGACCATAGT CTAAATTTAGACCATGTTTACTATGTGGCACCGTCTCACGGAACTGGATC TCCAATGCTTCTTGCGCCTTcctatcaaatttattttcctcTCTTTTTAA AGGGGTTTAAGATTAGACGTTTTATACAGTAAGGTTTCCATAACTTGAAC ACGCACGAAGAGTTAAAATCTGtttgaaatattaaaaattgggttaaaga aaatttcttgtAAGGCGCATCATTAACTGACGATGACTGCGTTGAAGTTA ATGAAACGTTCAAattattagcctatttcataggatttgtGTTTTTTGTA CATGATATTTTTCTACGTCACTGAGGTAACTAACCTTTTGTGGCTGAGCA CTCTTTTGCTGATTGAGATTAAaggttttacaaaaagaaaaaacaatgga aaaggAGTTTCTTCTCCATCCCCTTTGGCAAGGAAATATCTCTTTGGTAA AATTATTACCAGTGTCCTTAAATGTATTACCATTCATTTACAAAAAGGTA GAAGATTATTCAGGGTTACATAAAGAACGCTGATTGAATCataaactctt tttttctttagGCTGGGGTGATCTGTCTTTCGAAGGTTCAAGTCCTGCTC GATTACAACAAGCTAAATTGCCGGTGATCAGATCAGATGGTGAAACTGTG GATGTTGGATATAATAGCCCAAGAGAAGGTGTATCCAATGCATGCCAAGG TGATTCTGGTGGTCCCCTGAGTTGTCAACGTGATGATGGTACATGGCAAG TTGAAGGTGCTGCAAGCTATGTTCTAAATAGATGTCAATACCTTAGTGCG TATGCGCCACTCAATAAATATTTGAGTTGGGTCAAAAGATATGTGCCTGG CTTGTAAATATTGTTATGCAGGTGGCATTTCTgttttggactcaaaacac cATGTGGATTTGGAAATTGTCTGTTatcacccagctggcacataaagTTT TTTCGACGTCTATCTAATGTTCGCAACGTCCATAACGATAGaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045636XLOC_045636Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073526-exon-scaffold_94-1491911889:139990..140084TCONS_00073526-exon-scaffold_94-1491911889:139990..140084Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1510915933:139990..140084TCONS_00073526-exon-scaffold_94-1510915933:139990..140084Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1575043694:139990..140084TCONS_00073526-exon-scaffold_94-1575043694:139990..140084Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1491911889:140829..140937TCONS_00073526-exon-scaffold_94-1491911889:140829..140937Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1510915933:140829..140937TCONS_00073526-exon-scaffold_94-1510915933:140829..140937Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1575043694:140829..140937TCONS_00073526-exon-scaffold_94-1575043694:140829..140937Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1491911889:144853..144866TCONS_00073526-exon-scaffold_94-1491911889:144853..144866Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1510915933:144853..144866TCONS_00073526-exon-scaffold_94-1510915933:144853..144866Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1575043694:144853..144866TCONS_00073526-exon-scaffold_94-1575043694:144853..144866Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1491911889:146031..146359TCONS_00073526-exon-scaffold_94-1491911889:146031..146359Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1510915933:146031..146359TCONS_00073526-exon-scaffold_94-1510915933:146031..146359Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1575043694:146031..146359TCONS_00073526-exon-scaffold_94-1575043694:146031..146359Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1491911889:147036..147324TCONS_00073526-exon-scaffold_94-1491911889:147036..147324Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1510915933:147036..147324TCONS_00073526-exon-scaffold_94-1510915933:147036..147324Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1575043694:147036..147324TCONS_00073526-exon-scaffold_94-1575043694:147036..147324Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1491911889:149601..150033TCONS_00073526-exon-scaffold_94-1491911889:149601..150033Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1510915933:149601..150033TCONS_00073526-exon-scaffold_94-1510915933:149601..150033Clytia hemisphaericaexon
TCONS_00073526-exon-scaffold_94-1575043694:149601..150033TCONS_00073526-exon-scaffold_94-1575043694:149601..150033Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_94supercontigscaffold_94:139990..150033 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.227292 0.107 0.430304 0.180368 1.32061 0.279483 1.26786 8.19016 5.44429 11.7939 1.62226 0.741191 0.426747 1.48704 4.26083 15.7627 0.036222 0 0 0 0.285325 0.127323 0.910993 0.369967 0 0
Blast
BLAST of TCONS_00073526 vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.628e-38
Identity = 89/249 (35.74%), Postives = 134/249 (53.82%), Query Frame = 2
Query:  437 SRIVGGTTARAGAWPWQVSLQIYNQ----HFCGGSILTSTWILTAAHCVDD-KTERPNQVYVIAGAQNIKITESSQQXXXXXXXXMHPSFRRDENNTPIS---DIALIQLSSKLNMNDRVVRACLPQQGVYPTIGKRCYITGWGDLSFEGSSPARLQQAKLPVIRSDGETVDVGYNSP---------REGVSNACQGDSGGPLSCQRDDGTWQVEGAASYVLNR-CQYL---SAYAPLNKYLSWVKRYV 1120
            +R+VGG  AR  +WPWQVSLQ  +     H CGGS++ ++W+LTAAHC+   +T R     V  G  N+ + ES    +   +I++H    +D N+  IS   DIAL++L++ +++ D++  ACLP  G        CY+TGWG L   G+ P  LQQ +L V+     +    + S           +GV ++C GDSGGPL+CQ  DG WQV G  S+     C Y    S +  ++ Y+ W+   +
Sbjct:   27 TRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAHCISSSRTYR-----VGLGRHNLYVAESGSLAVSVSKIVVH----KDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNCQASDGRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVI 266          
The following BLAST results are available for this feature:
BLAST of TCONS_00073526 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL2A1.628e-3835.74Chymotrypsin-like elastase family member 2A OS=Hom... [more]
back to top