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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073501 ID=TCONS_00073501|Name=TCONS_00073501|organism=Clytia hemisphaerica|type=transcript|length=2305bp
GTCAttacaattttacaaaaaaagacaCAATGAATGAATCAAGAAGCACC
ACACCACACCGACATCATCAACCACTCAACATTTCTCTTCATACAAGATG
CTGCATTGAACAAACTCTTGCTCCTTTACAAAACATGAACACGAAAAGTC
TTGAAACGATGAACAAATTGTTGGCTCCCTGTCTACCTGATAGTGAAAAC
AGAGTCTTAAGTAGCCATGGGAACAAGACAAATATGCTTAAAGATAACCT
ATTCGGGTCTATCATTTTAACCTTGGTGCCATCAAGTGAGATTTCTACTA
ACCATGAAAATACAGACCACTGTCAAAAATATTTGTGTGAAACCCCGATC
AATCAAAACATGTATCCTTACATAACATTActaatagcaacacttctcat
CGCAACCATTGGCAATATTTTTGTTTGTAGCATCATCACCAAGATTCGAT
CATTACGTCAACATCCGACATACAAACTCTTAAAATCCTTAGCTGTTAGT
GATCTGCTGGTATCGCTACTCGTCTTACCGATCAAAATATCCATGGCTTT
AACCAACAATCATTTCTGCAGCTCAATCAACATATGTCGACTATATCAGA
CTGTTGAccatgtattttttactgcttcGATCACCCATCTGTTTGTTATT
GCTATAGATCGGTATCTGACAATCAGTCGACCTTTTAACTACCGGTTTGC
AGAAAAACATTACAGGATGATGATTTGTGTGGTATGGATATATGCAGCTC
TCTGGGGAGTTCTCAGCAATGTTGATTTTGAAACCTATCAATTCCAATCA
ACCTTCCATATCGATCATGGAAAATGCCAGCGGAAAGACATCATTTTCCC
ACGTGTTTTATTCATCGCAGTTTTCTTTTTGCCTTGTTTAGTCATGTTTT
ATATGCATGCTTGTGTATGGAAGATCGCTGTTGAtcaaggaaaaaaaatc
gagaaagaAAACACAccgacacttcaattcaaaAGACTAACAGGCGTAGA
GAATAGTGAAAAAAGCTCTAAACAACTGTTACCAAAATATCTCAAGCAGT
TTTCAAATTCTTCATCAGGAAAATTCAAAGTTGAGTTTCGCGCTACAAAG
ATTATTCTCTCCGTATTCGGCACCTATCTTATCTGCTGGGCACCTGTCAC
CATTATGACTTTCATGCGGACTTTCAGAACGTTCAACATCGACAAGAATG
CGTATTTGTTTCTGTGTAGCTTTCTACCAAATCTGAACAGTTGTCTAAAT
CCGTTTCTGTATTGTTTACTTCATCGAGACTTTATAAACGCGTTGAAAAC
AGTCTATAGGCGCCTAAAGTTTGTTAGTAAACATGAGATGTCGATCAAAC
ATAGAGCTAACACTGGTGAAATTATACGGACCAGAAAAGCAAACACTAGG
TGATATCTAGCGGACCAGAAGGTTAAAGATTACGCAAAAATATACGGACC
AAATACAAGTTTAGTAGTGTTATACGGACCAAAGGAGCAAACACTAGATA
ACATTATACGGACCAGAAGAGAAAACACTAGATAACATTATACGGACCAG
AAGAAAAAACACTAGATAATATTATGGGGACCAAAAGAGCAAACACTAGA
TACAATTataccatagtccgtataaaaaaacccagtctggaagccttttg
tttctttccattgtttcttacttgaacttgcgttgagaaattagtttgtt
ttgctcactgtTTGATCatttgattaaatcttaaaccaatcccaagagga
atacttggtaacgtgataaaaaactgagcaaatcgatttctatcttttga
tattaacaaaggaaaaagctaacaaaaaattaaaacaataagcATCCAGa
acagggttttttatacgaaCTATGATTATACGGACCAGAAGAGCAAACAC
TAGATAACATTATATGGACCAGAAGAGAACGTTTCGCTCCAAATGAGCAA
CGTACCTACTTATCTTTTGAATACAATGTTTGAAAAGAACCAAAGCAAAT
ATTCAAGGAAAAGTTGTCAACTAGATTCAAACAAAACAAGAGTCAAAGTA
ATATTTCCGTTTCTGGCAAAGAAAAACGGCTTGAAATGATTTGGAACGCT
ACGTAGTTTTGGCTCGCAATATCGAGGACAGACAATACACTCCGTCCTAA
TAAGCCAGTCAATCTAATAAAAAAGAAGACCCGCCACCGCTTGATTTCTA
TATTTAaggaatgaaaaaatattttcaatcacACGAACTACAGACTTCCT
AAAGATttcaatgatacaaaataaacgtTGTATCAGTACAGTGGGTGTAT
CTCGA Run BLAST on NCBI protein sequence of TCONS_00073501-protein >TCONS_00073501-protein ID=TCONS_00073501-protein|Name=TCONS_00073501-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
HYNFTKKDTMNESRSTTPHRHHQPLNISLHTRCCIEQTLAPLQNMNTKSL
ETMNKLLAPCLPDSENRVLSSHGNKTNMLKDNLFGSIILTLVPSSEISTN
HENTDHCQKYLCETPINQNMYPYITLLIATLLIATIGNIFVCSIITKIRS
LRQHPTYKLLKSLAVSDLLVSLLVLPIKISMALTNNHFCSSINICRLYQT
VDHVFFTASITHLFVIAIDRYLTISRPFNYRFAEKHYRMMICVVWIYAAL
WGVLSNVDFETYQFQSTFHIDHGKCQRKDIIFPRVLFIAVFFLPCLVMFY
MHACVWKIAVDQGKKIEKENTPTLQFKRLTGVENSEKSSKQLLPKYLKQF
SNSSSGKFKVEFRATKIILSVFGTYLICWAPVTIMTFMRTFRTFNIDKNA
YLFLCSFLPNLNSCLNPFLYCLLHRDFINALKTVYRRLKFVSKHEMSIKH
RANTGEIIRTRKANTR Run BLAST on NCBI transcript from alignment at scaffold_93:96934..100158- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073501 ID=TCONS_00073501|Name=TCONS_00073501|organism=Clytia hemisphaerica|type=transcript|length=3225bp|location=Sequence derived from alignment at scaffold_93:96934..100158- (Clytia hemisphaerica)
GTCATTACAATTTTACAAAAAAAGACACAATGAATGAATCAAGAAGCACC
ACACCACACCGACATCATCAACCACTCAACATTTCTCTTCATACAAGATG
CTGCATTGAACAAACTCTTGCTCCTTTACAAAACATGAACACGAAAAGTC
TTGAAACGATGAACAAATTGTTGGCTCCCTGTCTACCTGATAGTGAAAAC
AGAGTCTTAAGTAGCCATGGGAACAAGACAAATATGCTTAAAGATAACCT
ATTCGGGTCTATCATTTTAACCTTGGTGCCATCAAGTGAGATTTCTACTA
ACCATGAAAATACAGACCACTGTCAAAAATATTTGTGTGAAACCCCGATC
AATCAAAACATGTATCCTTACATAACATTACTAATAGCAACACTTCTCAT
CGCAACCATTGGCAATATTTTTGTTTGTAGCATCATCACCAAGATTCGAT
CATTACGTCAACATCCGACATACAAACTCTTAAAATCCTTAGCTGTTAGT
GATCTGCTGGTATCGCTACTCGTCTTACCGATCAAAATATCCATGGCTTT
AACCAACAATCATTTCTGCAGCTCAATCAACATATGTCGACTATATCAGA
CTGTTGACCATGTATTTTTTACTGCTTCGATCACCCATCTGTTTGTTATT
GCTATAGATCGGTATCTGACAATCAGTCGACCTTTTAACTACCGGTTTGC
AGAAAAACATTACAGGTATCACATTTTATCAAATTATATTTTTGTATCGC
TTGAACAGCAGGCCTGTTTTCGGATCAAATATATATCAACAGTATTGCAG
GAAACCCATCTGTATACACACGCACTATGAAAGGGGAGGCTAACAGTCAT
TGATTTTTTCTTTGACATGTCTTGTAACTTGATTGCGAAGAAAAGAAATT
AACGAAGCCAGTCCTGATATTTTTAGATGTTACTAATTCGATTACTTACA
AGCTTTTAAGCTCTTTTACATGTATTGACACTATAAGTTTCCTCGAGTCG
AATCTTTCAAAACAAGTCCGAGTGAAGAAAACGAGCTAAGTAAATTTCAT
ACTCGAAGTTTTATGCCACATAGGATGGCATCTTTCAGTGAAATAAACGT
TTCACTCAAAAATGTCATATATAAGATTCTCAATTAAGACATCTACTCGA
TGTCAGCATATTAACCCCAATTGATGTTGTTTTGTTCTCTAGTTTCCCCA
GTGCGTTTTGTGTCTTTTAAAGGTACCAAGTCAAATATTTCGCCTTTGGC
ATACAACTTTTACCACTTTTACCACTTTTACCAGTTAAAGAAGATTGAGT
TATTAAAGTTCGAGCTTCCAGCGGTCTGTGTGATGGTGTGATTGGCCCTT
TTTTTATTGTAGTAGTGGTGTGTTCTATGATTTCAAAAGAGTGATGGTAC
ATGTGATCACTCATCACTGTGATGGTGTCAAAAGATTTTTCTTTGTATAA
TGACGCGATTAGAATTTAGTTTTGCTCCGCTAGGAGGGGCCTCTATGAAG
ACTCTGGTGCATCAAATTTTCTTTAAATTTCAGGATGATGATTTGTGTGG
TATGGATATATGCAGCTCTCTGGGGAGTTCTCAGCAATGTTGATTTTGAA
ACCTATCAATTCCAATCAACCTTCCATATCGATCATGGAAAATGCCAGCG
GAAAGACATCATTTTCCCACGTGTTTTATTCATCGCAGTTTTCTTTTTGC
CTTGTTTAGTCATGTTTTATATGCATGCTTGTGTATGGAAGATCGCTGTT
GATCAAGGAAAAAAAATCGAGAAAGAAAACACACCGACACTTCAATTCAA
AAGACTAACAGGCGTAGAGAATAGTGAAAAAAGCTCTAAACAACTGTTAC
CAAAATATCTCAAGCAGTTTTCAAATTCTTCATCAGGAAAATTCAAAGTT
GAGTTTCGCGCTACAAAGATTATTCTCTCCGTATTCGGCACCTATCTTAT
CTGCTGGGCACCTGTCACCATTATGACTTTCATGCGGACTTTCAGAACGT
TCAACATCGACAAGAATGCGTATTTGTTTCTGTGTAGCTTTCTACCAAAT
CTGAACAGTTGTCTAAATCCGTTTCTGTATTGTTTACTTCATCGAGACTT
TATAAACGCGTTGAAAACAGTCTATAGGCGCCTAAAGTTTGTTAGTAAAC
ATGAGATGTCGATCAAACATAGAGCTAACACTGGTGAAATTATACGGACC
AGAAAAGCAAACACTAGGTGATATCTAGCGGACCAGAAGGTTAAAGATTA
CGCAAAAATATACGGACCAAATACAAGTTTAGTAGTGTTATACGGACCAA
AGGAGCAAACACTAGATAACATTATAAGGACCAGAGGGGAAAGCACTACA
TAACATTATGCGGATCAAAAGAGCAAACACTAGATAAAATTATACGGACT
AGAAGAGCAAAAACTATATAACATTATACGGACCAGAAGAGAAAACACTA
GATAACATTATACGGACCAGAAGAAAAAACACTAGATAATATTATGGGGA
CCAAAAGAGCAAACACTAGATACAATTATACCATAGTCCGTATAAAAAAA
CCCAGTCTGGAAGCCTTTTGTTTCTTTCCATTGTTTCTTACTTGAACTTG
CGTTGAGAAATTAGTTTGTTTTGCTCACTGTTTGATCATTTGATTAAATC
TTAAACCAATCCCAAGAGGAATACTTGGTAACGTGATAAAAAACTGAGCA
AATCGATTTCTATCTTTTGATATTAACAAAGGAAAAAGCTAACAAAAAAT
TAAAACAATAAGCATCCAGAACAGGGTTTTTTATACGAACTATGATTATA
CGGACCAGAAGAGCAAACACTAGATAACATTATATGGACCAGAAGAGAAC
GTTTCGCTCCAAATGAGCAACGTACCTACTTATCTTTTGAATACAATGTT
TGAAAAGAACCAAAGCAAATATTCAAGGAAAAGTTGTCAACTAGATTCAA
ACAAAACAAGAGTCAAAGTAATATTTCCGTTTCTGGCAAAGAAAAACGGC
TTGAAATGATTTGGAACGCTACGTAGTTTTGGCTCGCAATATCGAGGACA
GACAATACACTCCGTCCTAATAAGCCAGTCAATCTAATAAAAAAGAAGAC
CCGCCACCGCTTGATTTCTATATTTAAGGAATGAAAAAATATTTTCAATC
ACACGAACTACAGACTTCCTAAAGATTTCAATGATACAAAATAAACGTTG
TATCAGTACAGTGGGTGTATCTCGA Coding sequence (CDS) from alignment at scaffold_93:96934..100158- >TCONS_00073501 ID=TCONS_00073501|Name=TCONS_00073501|organism=Clytia hemisphaerica|type=CDS|length=2802bp|location=Sequence derived from alignment at scaffold_93:96934..100158- (Clytia hemisphaerica)
GATGATGATTTGTGTGGTATGGATATATGCAGCTCTCTGGGGAGTTCTCA
GCAATGTTGATTTTGAAACCTATCAATTCCAATCAACCTTCCATATCGAT
CATGGAAAATGCCAGCGGAAAGACATCATTTTCCCACGTGTTTTATTCAT
CGCAGTTTTCTTTTTGCCTTGTTTAGTCATGTTTTATATGCATGCTTGTG
TATGGAAGATCGCTGTTGATCAAGGAAAAAAAATCGAGAAAGAAAACACA
CCGACACTTCAATTCAAAAGACTAACAGGCGTAGAGAATAGTGAAAAAAG
CTCTAAACAACTGTTACCAAAATATCTCAAGCAGTTTTCAAATTCTTCAT
CAGGAAAATTCAAAGTTGAGTTTCGCGCTACAAAGATTATTCTCTCCGTA
TTCGGCACCTATCTTATCTGCTGGGCACCTGTCACCATTATGACTTTCAT
GCGGACTTTCAGAACGTTCAACATCGACAAGAATGCGTATTTGTTTCTGT
GTAGCTTTCTACCAAATCTGAACAGTTGTCTAAATCCGTTTCTGTATTGT
TTACTTCATCGAGACTTTATAAACGCGTTGAAAACAGTCTATAGGCGCCT
AAAGTTTGTTAGTAAACATGAGATGTCGATCAAACATAGAGCTAACACTG
GTGAAATTATACGGACCAGAAAAGCAAACACTAGGTGACATTACAATTTT
ACAAAAAAAGACACAATGAATGAATCAAGAAGCACCACACCACACCGACA
TCATCAACCACTCAACATTTCTCTTCATACAAGATGCTGCATTGAACAAA
CTCTTGCTCCTTTACAAAACATGAACACGAAAAGTCTTGAAACGATGAAC
AAATTGTTGGCTCCCTGTCTACCTGATAGTGAAAACAGAGTCTTAAGTAG
CCATGGGAACAAGACAAATATGCTTAAAGATAACCTATTCGGGTCTATCA
TTTTAACCTTGGTGCCATCAAGTGAGATTTCTACTAACCATGAAAATACA
GACCACTGTCAAAAATATTTGTGTGAAACCCCGATCAATCAAAACATGTA
TCCTTACATAACATTACTAATAGCAACACTTCTCATCGCAACCATTGGCA
ATATTTTTGTTTGTAGCATCATCACCAAGATTCGATCATTACGTCAACAT
CCGACATACAAACTCTTAAAATCCTTAGCTGTTAGTGATCTGCTGGTATC
GCTACTCGTCTTACCGATCAAAATATCCATGGCTTTAACCAACAATCATT
TCTGCAGCTCAATCAACATATGTCGACTATATCAGACTGTTGACCATGTA
TTTTTTACTGCTTCGATCACCCATCTGTTTGTTATTGCTATAGATCGGTA
TCTGACAATCAGTCGACCTTTTAACTACCGGTTTGCAGAAAAACATTACA
GGATGATGATTTGTGTGGTATGGATATATGCAGCTCTCTGGGGAGTTCTC
AGCAATGTTGATTTTGAAACCTATCAATTCCAATCAACCTTCCATATCGA
TCATGGAAAATGCCAGCGGAAAGACATCATTTTCCCACGTGTTTTATTCA
TCGCAGTTTTCTTTTTGCCTTGTTTAGTCATGTTTTATATGCATGCTTGT
GTATGGAAGATCGCTGTTGATCAAGGAAAAAAAATCGAGAAAGAAAACAC
ACCGACACTTCAATTCAAAAGACTAACAGGCGTAGAGAATAGTGAAAAAA
GCTCTAAACAACTGTTACCAAAATATCTCAAGCAGTTTTCAAATTCTTCA
TCAGGAAAATTCAAAGTTGAGTTTCGCGCTACAAAGATTATTCTCTCCGT
ATTCGGCACCTATCTTATCTGCTGGGCACCTGTCACCATTATGACTTTCA
TGCGGACTTTCAGAACGTTCAACATCGACAAGAATGCGTATTTGTTTCTG
TGTAGCTTTCTACCAAATCTGAACAGTTGTCTAAATCCGTTTCTGTATTG
TTTACTTCATCGAGACTTTATAAACGCGTTGAAAACAGTCTATAGGCGCC
TAAAGTTTGTTAGTAAACATGAGATGTCGATCAAACATAGAGCTAACACT
GGTGAAATTATACGGACCAGAAAAGCAAACACTAGGTGACATTACAATTT
TACAAAAAAAGACACAATGAATGAATCAAGAAGCACCACACCACACCGAC
ATCATCAACCACTCAACATTTCTCTTCATACAAGATGCTGCATTGAACAA
ACTCTTGCTCCTTTACAAAACATGAACACGAAAAGTCTTGAAACGATGAA
CAAATTGTTGGCTCCCTGTCTACCTGATAGTGAAAACAGAGTCTTAAGTA
GCCATGGGAACAAGACAAATATGCTTAAAGATAACCTATTCGGGTCTATC
ATTTTAACCTTGGTGCCATCAAGTGAGATTTCTACTAACCATGAAAATAC
AGACCACTGTCAAAAATATTTGTGTGAAACCCCGATCAATCAAAACATGT
ATCCTTACATAACATTACTAATAGCAACACTTCTCATCGCAACCATTGGC
AATATTTTTGTTTGTAGCATCATCACCAAGATTCGATCATTACGTCAACA
TCCGACATACAAACTCTTAAAATCCTTAGCTGTTAGTGATCTGCTGGTAT
CGCTACTCGTCTTACCGATCAAAATATCCATGGCTTTAACCAACAATCAT
TTCTGCAGCTCAATCAACATATGTCGACTATATCAGACTGTTGACCATGT
ATTTTTTACTGCTTCGATCACCCATCTGTTTGTTATTGCTATAGATCGGT
ATCTGACAATCAGTCGACCTTTTAACTACCGGTTTGCAGAAAAACATTAC
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073501-exon-scaffold_93-1575043694:99444..100158 | TCONS_00073501-exon-scaffold_93-1575043694:99444..100158 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1575043694:97839..98625 | TCONS_00073501-exon-scaffold_93-1575043694:97839..98625 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1575043694:96934..97736 | TCONS_00073501-exon-scaffold_93-1575043694:96934..97736 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1510915933:99444..100158 | TCONS_00073501-exon-scaffold_93-1510915933:99444..100158 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1510915933:97839..98625 | TCONS_00073501-exon-scaffold_93-1510915933:97839..98625 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1510915933:96934..97736 | TCONS_00073501-exon-scaffold_93-1510915933:96934..97736 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1491911889:99444..100158 | TCONS_00073501-exon-scaffold_93-1491911889:99444..100158 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1491911889:97839..98625 | TCONS_00073501-exon-scaffold_93-1491911889:97839..98625 | Clytia hemisphaerica | exon |
| TCONS_00073501-exon-scaffold_93-1491911889:96934..97736 | TCONS_00073501-exon-scaffold_93-1491911889:96934..97736 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_93 | supercontig | scaffold_93:96934..100158 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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