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TCONS_00073291 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073291
Unique NameTCONS_00073291
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073291 ID=TCONS_00073291|Name=TCONS_00073291|organism=Clytia hemisphaerica|type=transcript|length=1643bp
cgtcggaaacatgcaaAGGAGTGCAAAAGCTTTATGATTGATCTGATTAT
TTAGATATTTAACAGAATGATATTTGGAACTACTTTTATCCTGTTTATGT
TGAAGTTGTGgtgttttgaTAATAATCGTATTATAAAATGAAGGAGCATA
ATAAATCGGAAGATGAAATCCTTGCTTCATGGTTGGTCAAACGCAGAAGA
ACAACAATCCTTGGTGTGATGCAAAGATCACTCTTCGCATTTGAATATTC
TGCTGTTGCTGTGTCAGCACTTTATTACTATCGATACACATTGAAAGTAC
ACGATGCAAAATTGTTTTACTCTTTTAGCATGGCTGTCATGTTTCTGTCT
GCTGCTGCGTCTGCCATGTTTATTGGACGATATATGGATCAGACACGGCA
TTTAAGACGTATTGCATTAACAACAGCGATGTTCTCAGTAATTGGAAACG
TCTTTTATACGATACCGTATTCAAGATACTTTCCGATTATTGCTCGCACT
TTGTGCGGAGTTTCTGACGGAATCCAACCAGCAATGGCAGgTGAATTCGC
ACGAGTTTACACAAAGGAAGAATTTGCTAAAGTGCTATCCATCTATCAAA
TATCAGCTTCTGTCATATACGCCCTTGCACCCTGTACACCCGTCCTTTTC
AATGGCGTTCATTTCTACATTGGACCAATAGAAATCAACCAATATAACTG
CATCAGTCTGGTTTTAATCATTTTAGTCCTGGTTTACACGTTGCTCGTTT
ACATTAATGTTACTGATCTGACCAAAGAAGATGGTTATCATATTTTTGTA
GCTAAGTATAAGAATGACATTAACGAGGATGATGTTTCTCCGTCCGGCAA
GAAGTCTGATTGGACGTTAATGGATACTCTCACCAACGCCAATCTCCTTG
TGTTGATTTTCACGGATGGATTCATCAGTTACATTGATTCTATGATGGAA
GTGATGAACAACATGATCGGTTTGTATAATTTCGGATGGAACATCAATCG
AATCAGTGTTTTAACTGGTATTGCAGCAATCATCTTCAGCGCTGCAAATT
TCATCTTTCAACAACGAGTTTTAAAAAGTCGTTTAACTTTTTATCTGTTG
TTTAttgtatgttttttatttgCAATGATGGAACTTTCTCTTGCAACTAT
CTCAATTAATATACCTCTCAATGTGGACGCAATTAAATTCACTTTATTTA
CTTCTTGTATTGGATTGAATATTTTGTTTGGGTTTGGATCAGGTGTTTAT
TCAAAATGGTTGATTTTTTCATTGGTACCAGCAGATTCAAAGAGCTTTAT
AGAATCACAACGATACGTTGTTGCCAAGTCGTTTATGTGTTGCGGATATT
TCACCGCTTTTCTAATGTACCAGGAAAGTTTTTATGGGTTCACGATACTT
TCGTGTATTTGCTTTGCTATCGTCACATTCTTGCTTCTGTGGAGATGCAA
GTTTACAAACGAATAAAGATTAAAACAGAATTGTTATAATTTGACTTTAA
AGGCaaaattattttgcaaaatgtaaATGTGAGTAAGTGGGGCTCAGATC
TGAGTAAAATGATGATGAACACTTTGGCTCTCGCTcgtctacaatcagtg
ccatttaacatattggcaatttttggttattttaccGTTTCTT
Run BLAST on NCBI

protein sequence of TCONS_00073291-protein

>TCONS_00073291-protein ID=TCONS_00073291-protein|Name=TCONS_00073291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
MKEHNKSEDEILASWLVKRRRTTILGVMQRSLFAFEYSAVAVSALYYYRY
TLKVHDAKLFYSFSMAVMFLSAAASAMFIGRYMDQTRHLRRIALTTAMFS
VIGNVFYTIPYSRYFPIIARTLCGVSDGIQPAMAGEFARVYTKEEFAKVL
SIYQISASVIYALAPCTPVLFNGVHFYIGPIEINQYNCISLVLIILVLVY
TLLVYINVTDLTKEDGYHIFVAKYKNDINEDDVSPSGKKSDWTLMDTLTN
ANLLVLIFTDGFISYIDSMMEVMNNMIGLYNFGWNINRISVLTGIAAIIF
SAANFIFQQRVLKSRLTFYLLFIVCFLFAMMELSLATISINIPLNVDAIK
FTLFTSCIGLNILFGFGSGVYSKWLIFSLVPADSKSFIESQRYVVAKSFM
CCGYFTAFLMYQESFYGFTILSCICFAIVTFLLLWRCKFTNE
Run BLAST on NCBI

transcript from alignment at scaffold_9:29817..39404+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073291 ID=TCONS_00073291|Name=TCONS_00073291|organism=Clytia hemisphaerica|type=transcript|length=9588bp|location=Sequence derived from alignment at scaffold_9:29817..39404+ (Clytia hemisphaerica)
cgtcggaaacatgcaaAGGAGTGCAAAAGCTTTATGATTGATCTGATTAT TTAGATATTTAACAGAATGATATTTGGAACTACTTTTATCCTGTTTATGT TGAAGTTGTGGtatgataaaattttatgagATATTTGTTTGTTGTTGCTG CAAATTTTGTCTGATATTAGTTTTTCATGGTTTCAAAGCACAATTTCAAT TGAAAACTTGGTTAATAGAAATTGAAGTGAATAAAGACAACTTTTGACAA AGAAAACATGTTTTTTGAAACCTCACATCGACAAACCCGGCTTCAGTGCC CCGGTTGAGCTTTTTCACTTAGTATGGGAATGAAAACTTCAATCTAAATT CCAATGGAAATAAAAGATCTATCACAtgttttttgttataagaacaaact atatataagGCTTAGATagccaaaaatattaagaacaagttaagaacatt ttaaagctttgcggaCCCTAAAACACCCGATCTCTTGGGAAATTCGACaa attcttaacttgttcttaacattttgtacATCGAAGTCTTATcttcttat atggtttgttcttataaaaaaaacctgtaTCGAAAATGCTCCAAATTAGC CAAAATTTGTGTAGAATCACACTAGAAACTGACCCAAAGTaattttaggg tttttttttgttaattttttcaaatctgtcttttaaaggtgttttgaTAA TAATCGTATTATAAAATGAAGGAGCATAATAAATCGGAAGATGAAATCCT TGCNCTgtcttttaaaggtgttttgaTAATAATCGTATTATAAAATGAAG GAGCATAATAAATCGGAAGATGAAATCCTTGCTTCATGGTTGGTCAAACG CAGAAGAACAACAATCCTTGGTGTGATGCAAAGATCACTCTTCGCATTTG AATATTCTGCTGTTGCTGTGTCAGCACTTTATTACTATCGATACACATTG AAAGTACACGATGCAAAATTGTTTTACTCTTTTAGCATGGCTGTCATGTT TCTGTCTGCTGCTGCGTCTGCCATGTTTATTGGACGATATATGGATCAGA CACGGCATTTAAGACGTATTGCATTAACAACAGCGATGTTCTCAGTAATT GGAAACGTCTTTTATACGATACCGTATTCAAGATACTTTCCGATTATTGC TCGCACTTTGTGCGGAGTTTCTGACGGAATCCAACCAGCAATGGCAGGTA ATCAAATTTCTTCCAACAAACAAAATGATGTAGTCAAAAGTTATTTAGTA CCTAAAGAAAGTTAGATTAGACCTTAAGAGGAAATCCAATAACGAAAGGA TGTTGTGTGGGTATCGTGAAAGTCATTATTGTACCTTCTCATGCACCGTG GTAGCAAATTTTCCTCCCAAAGCAGCTCAAGCCCTGGTTTTAGAATTCAT AACGGCCCAAGACCTTAATATTAGCTTTAAAGGTTCCAAATAACAAATAG GACAATTTCATTACAAGATCACGGTTCGTAAataccatagtccgtataac cccggtctggaagccttttgtttctttccattgtttcttaattgaacttg cgttgagaaattagtttgttttgttcactttttgatcatgtgattaaNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtg tgattaaatcttaaaccaatcccaagaggaatatttggtaacgtgatcaa aaactgagcaaatcgatttttatcttttgataataacaaaggaaaaacta acaaaaagttaaaacaataagcttccagaccagggttttttataaggact atgTAAATACTCACTGTGAAAGCAAATGTCAGTCCTATTCAAGTGAGAAC AAAAGGTAGCCATGACAGCAAGCTAGTCCAGTCTTTGAGACTAACAAAGT AGATGTGTTTGAATTTCCTTGGTGGAATCAAGTAGCGCAAAAAGtctgtt ttgtaaaaaaaatatatagaatgtattttttgactttcaACTTATTTCTA TCTGGTCGATATAGTAATAAATTCTCTCCATCTCAATTGTATTAAAATGT GGTTTCAAGTAATTGCCAAAATATATGAAATGTTGAGAGTGCGTGCGacg aaataataaaaaaatcaaatgttcATTATTGTGTATAATTATCGCAATGA TAcaactagtgtatatgtataagaattgcgaagcgattcaggcaagtcac tcgattcgcaagttgcaagcaaaatatttatagggtcagTAGAATCGTAA ATACAAACCCTAGATACAACTGCTCAGGTCCAGGAAGACTGTGCCCCTTT AGAGATTTACTCAAACACTCCAGGCGTACAACAAACTTACAACGTTTACT TCtacgaatttgaggaaaattatacaaattgTTTCACAAATCGTTGGAAA ATCAGCAATTTCAAATGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACT ACCAAGATCCAATCATCTAAGGAATGGTTCTCCCACCATCATAATACAGT TTATTTTCCAGCTTTGAACCTCTTTTTGCAACGAAGCAACAACTCCGTCG AGGCTGCTGTCCTGTTGACGgaacaataaaaattccatcttccTTCTTCC TCCAGctgctttcttcgtttcttttcatcaagcaccGTTTCTTTTCAAAG CACCAACGTCTCTTTTCAAAACAACAATGATTTTATTTTTCAAAGacaga gtcaacattcgaattcagagtcaacattcgaatttggaaaagttcgaaaa tcttttcccgagtcaatgcaacgacttcttggAAAAAGAGCGtttgaacg cttccagcccgcgctgattttccaatctcttttttaaatttcctaattta aacatTAGGGAGATAATCGAAACAGAAACNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAGG CAAGATTATCTCCGCAACATTTTAGATCTGGTATACATCCTCTACACTAA AAACCAATTGTTCCAAATTTACGGAAGCGACGGATAGAAATGTACGAGAA AGTGCCGCCTGATGGATCGAAATGATGTTTTCGGTACCGTAGAAAGCGCA CATCAATTTTTCCTTGGCGCTCCcctggtatatagaatttaaaggtacat gcacacgatagcaaaactgcttcgctcatgtatattcgcttcgcaaaaat atTAAACATATAAGGCTTCTTATCCTAGAAGTTCAAGGAATGGTCTAGTG TTCCATTCACTTCATAGTCCTACAAGAATAACCGATAGCGAAGCGCTACA ATAGCCCCTGCGGGCaattatcatatttttccaaaaaaatataaatcttg aaaattgggtaaaaattgcaatgttTCTCTGACCTGTTTGTGAACTAATA GAACTTATTACTTAAAAACGCTAGCTGAACGTTGAATTGAAGCTTAGTTG CGGAGAGGAGATCATTCGTCACAAGCCCCAGGGCATCATATTATTGACCG ACATGTATAATCAGCCTCGTATCCATATATCCCAGGCTTAATATTTACGT TTTACGTTGACGCACGAGAGGTTATATTATCTCCCGCTCTCAGTAAAACG TCAgcaaaatccgctgggagttaatcaccatggtaataatTTCAATTAAT TACCCGATGCACAACAATTGTACAATTTTCGAATTTCAAAaggaggcaag tgatgttcgtaacgtaatttatgaaaaggtctatagtgATAGAATCAGTA TATTTCTACTGTACGATGTAAACGGGGCTTTATGAATTAACGTAATCTAA ATTAGCAAAAGAAGAATAGATTATTAATGGAATTGATTGAAAACAGCTTG agttattttgaaaagtttaattGCACCTGCATTCTTTGTAGTTTGTATTT AATGAGAACGACCAAAATTTTCCTCGATATTGTTAACGCTCTCCAATTTA AATATTTAGCAATTATCTGTTTCTTTAATAAGAGTCTACTGATGAAATAG TTAATTGAAAACAGCTTGAGCTATTCTAATTCCTTTTAAAATAACCTCAG AAACCGTCGAATTCATGCATTTTATTACTAATGATGAGTTATTTGTTTTG TCTCTGTCCTCAGGTCAGGTTATCATACTTTCACATAATTAGTGCAGTTA CTTTATTTGTAatttatttaaaggttttgttttgattgaaaggtctgatg atgatgatgatgtagtaaaaacaagtgcgacaagattagaaaaaggtttt gaaaaaatgaaaatacattagataaaaaaatattcCTCAATTCAAACTTA AGGgacttttactgatactctttagaattcttttatatttataataaata cagttgacgctctctaattcgacgttctaccattcgatgaaatttaaagt ccccgtcaacaagaaactcttctaaacgacgctcccttattcgatgagct cccttattcgatgaaaatccaattccccttgaagatcgaattggagagcg tcaactgtagatcgttttctatcttataatcaaaacattcgatcgtaaat ttgctcgaaatcaactttgctatttttttgttttcaaaatcaatagaatg tggggtcacatctcgaaacaactttcgatctttcacttgtttgctagtct gaatcgcagacctctacaaaaccccaggtagtataggtctgtttaatgat ctaccaaccgctttccggttcgcaaaggaaatcttggcgagttaataatt tgattgacattgatgtgcgcgcgaaaacgatcgtttcgaacgttttcaat gcaatgtttacattcgaaattcgaatcccagaccagaaaaacaaaacaga aaaaagaaaaaaacaatctgatgcgcgcattatgtacagtctatagattt atttttgacttttgcttttataagatatctggtctgtaaatttatcaaaa cttttccatcagctcttctagtagggggaaatttgttcgtttttttaagg ttgctcgatttttttagtcaaagcacttgttatacatttttggaaagcca atgggtaggggaatcaaaataagttgggtgccaatttttttcggacgctt tggtgtgattttcggacaaatgcgacggtctcgggcaaaaatcatagggt gaaaaatttgtcataattgtctttatgtgcatgttttgagtgtattttta agcaatctagagctcaaattttcaaaatttcccccttcgggccaaaccat ggtttggccctcgcggtgtcactaaacttcagccccccccaatatgaaaa tacttcctacggcactggttGTTCAATATGCTATCTGTATGATAGCAGGC TTTAATTCAAAGTttggcgaggccaatttaatatATTGGTTTatgggcca agctacccaaaaaaagaAGGTCGCTCGGTcggcaaaaaaataaaagtata aATGGCAGCAAAatctacatcttgacaaaaatgcgaaataaaaagacaca aaaagctctCATGGATTAAATGAAAAACTGGAcacaaaattctcaaaacc ttggaaaaactactaaaatcttgaaaatttggcagtctgtaaagcaatga agaaaaaaaagtacTGCCAAAATCAATCTTATTTTTATtcggattttttt aatttcagggtcggtcaggcccgtaaaacaactaatcgaATTATTCTCGC CTATCTAACCTTAATTCTCAGTCGAATTGagcataatttttattttcttt attttcaaaaaatattttagtaccCAAAGAGTTaaagcgacaacaaaaga aatctacTAACCCAAAAAATATCTCTCTTAAGGGCAAGACCAGGTCTATA TGAcaagccgtttttccattgttttcaagaaactgTTTTTCCATCGCTTA ACATTCCTCTGGCGAAGCTCGGGTGAAACGTGTAATCATTTCGTGATCAC ATGATAACAAGtgaaattcgaaaattgcactcgtcatttttttgttttaa attttcctaTTCCTATCGGACTTGGAAATGTAAAGGCACAGTCCGGCTAT ATTTAAGGGTCCTCTATGAATTTTGCACTGACAACGCATGATAGATTCCA TTTGTCCAAACTACTATACCGGTCTCAGACTCATCCCTTGAAACAAAGGC TTTAAACGACGAAAAGATCCATTacgtttaaaaaataatttgtatAAATG ATTTTGTGAGTTTGTTTCGTTTGTGTTCTGAATTGTTACGGACAAAAGGA TTGATAATGGATTCTCTCCTACAGATGTAAACCCACCCCTAGTGAAATTC GAAAATCGCACTCGTAATTTTTTAGCTTCTTAACTTTCCTTCCGTCTTTT CAGActcggaaaaataaaaattcactCGGGCAATTATTTTCTAATTGGAC TTTGGCGCCGTAGGAAGAAATTTCATAATTTGGGAGCAGAGGTTAATTGG GAGCACGAGGGTCAACCATATTTGGCCCAaggcaaaagttttgaaaattt aagatcAAGATGCTGAaaaatgcactcaaaataaAAGGTCATTATgataa attcaaagaaaaacatcctccattttacaaaaaaaaaacatccctCAAAA AattagtgggggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaa aacaatctgatgcgcgcattatgtacagtctatagatttatttttgactt ttgctttaataagatatctggtctgtaaatttatcaaaacttttccatca gctcttctagtagggggaaatttgttcgtttttttgaggtcgctcgattt ttttagtcaaagcacttgttatacatttttggaaagctaaggaaCATCCC TCAAGAAATTAGTGGGAGGGGGGAGGTAAAGTCCCTCTTGCCCCCTCCCC cggttgctacggcactgcactCGTTATCGTGTGATTGCATCTATTACTAA TCAATCTTCCtccattaaatttcaaaacagaacAAATAACAATGGACAAT GATTCGATTATTAAATGACAAAGGAATTTACTAGGGGAACGTATTATCAG AAAATTGGTATCACGAGGCAGCATATTCAAAAGCTTTCAACTTAAAGACA CAACAGCACAATACTtttgttttgtcatttttcaggTGAATTCGCACGAG TTTACACAAAGGAAGAATTTGCTAAAGTGCTATCCATCTATCAAATATCA GCTTCTGTCATATACGCCCTTGCACCCTGTACACCCGTCCTTTTCAATGG CGTTCATTTCTACATTGGACCAATAGAAATCAACCAATATAACTGCATCA GTCTGGTTTTAATCATTTTAGTCCTGGTTTACACGTTGCTCGTTTACATT AATGTTACTGATCTGACCAAAGAAGATGGTTATCATATTTTTGTAGCTAA GTATAAGAATGACATTAACGAGGATGATGTTTCTCCGTCCGGCAAGAAGT CTGATTGGACGTTAATGGATACTCTCACCAACGCCAATCTCCTTGTGTTG ATTTTCACGGATGGATTCATCAGTTACATTGATTCTATGATGGAAGTGAT GAACAACATGATCGGTTTGTATAATTTCGGATGGAACATCAATCGAATCA GTGTTTTAACTGGTATTGCAGCAATCATCTTCAGCGCTGCAAATTTCATC TTTCAACAACGAGTTTTAAAAAGTCGTTTAACTTTTTATCTGTTGTTTAt tgtatgttttttatttgCAATGATGGAACTTTCTCTTGCAACTATCTCAA TTAATATACCTCTCAATGTGGACGCAATTAAATTCACTTTATTTACTTCT TGTATTGGATTGAATATTTTGTTTGGGTTTGGATCAGGTGTTTATTCAAA ATGGTTGATTTTTTCATTGGTACCAGCAGATTCAAAGAGCTTTATAGAAT CACAACGATACGTTGTTGCCAAGTCGTTTATGTGTTGCGGATATTTCACC GCTTTTCTAATGTACCAGGAAAGTTTTTATGGGTTCACGATACTTTCGTG TATTTGCTTTGCTATCGTCACATTCTTGCTTCTGTGGAGATGCAAGTTTA CAAACGAATAAAGATTAAAACAGAATTGTTATAATTTGACTTTAAAGGCa aaattattttgcaaaatgtaaATGTGAGTAAGTGGGGCTCAGATCTGAGT AAAATGATGATGAACACTTTGGCTCTCGCTcgtctacaatcagtgccatt taacatattggcaatttttggttattttaccGTTTCTT

Coding sequence (CDS) from alignment at scaffold_9:29817..39404+

>TCONS_00073291 ID=TCONS_00073291|Name=TCONS_00073291|organism=Clytia hemisphaerica|type=CDS|length=2658bp|location=Sequence derived from alignment at scaffold_9:29817..39404+ (Clytia hemisphaerica)
ATGAAGGAGCATAATAAATCGGAAGATGAAATCCTTGCTTCATGGTTGGT
CAAACGCAGAAGAACAACAATCCTTGGTGTGATGCAAAGATCACTCTTCG
CATTTGAATATTCTGCTGTTGCTGTGTCAGCACTTTATTACTATCGATAC
ACATTGAAAGTACACGATGCAAAATTGTTTTACTCTTTTAGCATGGCTGT
CATGTTTCTGTCTGCTGCTGCGTCTGCCATGTTTATTGGACGATATATGG
ATCAGACACGGCATTTAAGACGTATTGCATTAACAACAGCGATGTTCTCA
GTAATTGGAAACGTCTTTTATACGATACCGTATTCAAGATACTTTCCGAT
TATTGCTCGCACTTTGTGCGGAGTTTCTGACGGAATCCAACCAGCAATGG
CAGgTGAATTCGCACGAGTTTACACAAAGGAAGAATTTGCTAAAGTGCTA
TCCATCTATCAAATATCAGCTTCTGTCATATACGCCCTTGCACCCTGTAC
ACCCGTCCTTTTCAATGGCGTTCATTTCTACATTGGACCAATAGAAATCA
ACCAATATAACTGCATCAGTCTGGTTTTAATCATTTTAGTCCTGGTTTAC
ACGTTGCTCGTTTACATTAATGTTACTGATCTGACCAAAGAAGATGGTTA
TCATATTTTTGTAGCTAAGTATAAGAATGACATTAACGAGGATGATGTTT
CTCCGTCCGGCAAGAAGTCTGATTGGACGTTAATGGATACTCTCACCAAC
GCCAATCTCCTTGTGTTGATTTTCACGGATGGATTCATCAGTTACATTGA
TTCTATGATGGAAGTGATGAACAACATGATCGGTTTGTATAATTTCGGAT
GGAACATCAATCGAATCAGTGTTTTAACTGGTATTGCAGCAATCATCTTC
AGCGCTGCAAATTTCATCTTTCAACAACGAGTTTTAAAAAGTCGTTTAAC
TTTTTATCTGTTGTTTAttgtatgttttttatttgCAATGATGGAACTTT
CTCTTGCAACTATCTCAATTAATATACCTCTCAATGTGGACGCAATTAAA
TTCACTTTATTTACTTCTTGTATTGGATTGAATATTTTGTTTGGGTTTGG
ATCAGGTGTTTATTCAAAATGGTTGATTTTTTCATTGGTACCAGCAGATT
CAAAGAGCTTTATAGAATCACAACGATACGTTGTTGCCAAGTCGTTTATG
TGTTGCGGATATTTCACCGCTTTTCTAATGTACCAGGAAAGTTTTTATGG
GTTCACGATACTTTCGTGTATTTGCTTTGCTATCGTCACATTCTTGCTTC
TGTGGAGATGCAAGTTTACAAACGAATAAATGAAGGAGCATAATAAATCG
GAAGATGAAATCCTTGCTTCATGGTTGGTCAAACGCAGAAGAACAACAAT
CCTTGGTGTGATGCAAAGATCACTCTTCGCATTTGAATATTCTGCTGTTG
CTGTGTCAGCACTTTATTACTATCGATACACATTGAAAGTACACGATGCA
AAATTGTTTTACTCTTTTAGCATGGCTGTCATGTTTCTGTCTGCTGCTGC
GTCTGCCATGTTTATTGGACGATATATGGATCAGACACGGCATTTAAGAC
GTATTGCATTAACAACAGCGATGTTCTCAGTAATTGGAAACGTCTTTTAT
ACGATACCGTATTCAAGATACTTTCCGATTATTGCTCGCACTTTGTGCGG
AGTTTCTGACGGAATCCAACCAGCAATGGCAGgTGAATTCGCACGAGTTT
ACACAAAGGAAGAATTTGCTAAAGTGCTATCCATCTATCAAATATCAGCT
TCTGTCATATACGCCCTTGCACCCTGTACACCCGTCCTTTTCAATGGCGT
TCATTTCTACATTGGACCAATAGAAATCAACCAATATAACTGCATCAGTC
TGGTTTTAATCATTTTAGTCCTGGTTTACACGTTGCTCGTTTACATTAAT
GTTACTGATCTGACCAAAGAAGATGGTTATCATATTTTTGTAGCTAAGTA
TAAGAATGACATTAACGAGGATGATGTTTCTCCGTCCGGCAAGAAGTCTG
ATTGGACGTTAATGGATACTCTCACCAACGCCAATCTCCTTGTGTTGATT
TTCACGGATGGATTCATCAGTTACATTGATTCTATGATGGAAGTGATGAA
CAACATGATCGGTTTGTATAATTTCGGATGGAACATCAATCGAATCAGTG
TTTTAACTGGTATTGCAGCAATCATCTTCAGCGCTGCAAATTTCATCTTT
CAACAACGAGTTTTAAAAAGTCGTTTAACTTTTTATCTGTTGTTTAttgt
atgttttttatttgCAATGATGGAACTTTCTCTTGCAACTATCTCAATTA
ATATACCTCTCAATGTGGACGCAATTAAATTCACTTTATTTACTTCTTGT
ATTGGATTGAATATTTTGTTTGGGTTTGGATCAGGTGTTTATTCAAAATG
GTTGATTTTTTCATTGGTACCAGCAGATTCAAAGAGCTTTATAGAATCAC
AACGATACGTTGTTGCCAAGTCGTTTATGTGTTGCGGATATTTCACCGCT
TTTCTAATGTACCAGGAAAGTTTTTATGGGTTCACGATACTTTCGTGTAT
TTGCTTTGCTATCGTCACATTCTTGCTTCTGTGGAGATGCAAGTTTACAA
ACGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045471XLOC_045471Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073291-proteinTCONS_00073291-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073291-exon-scaffold_9-1491911889:29817..29926TCONS_00073291-exon-scaffold_9-1491911889:29817..29926Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1510915933:29817..29926TCONS_00073291-exon-scaffold_9-1510915933:29817..29926Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1575043694:29817..29926TCONS_00073291-exon-scaffold_9-1575043694:29817..29926Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1491911889:30584..31013TCONS_00073291-exon-scaffold_9-1491911889:30584..31013Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1510915933:30584..31013TCONS_00073291-exon-scaffold_9-1510915933:30584..31013Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1575043694:30584..31013TCONS_00073291-exon-scaffold_9-1575043694:30584..31013Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1491911889:38302..39404TCONS_00073291-exon-scaffold_9-1491911889:38302..39404Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1510915933:38302..39404TCONS_00073291-exon-scaffold_9-1510915933:38302..39404Clytia hemisphaericaexon
TCONS_00073291-exon-scaffold_9-1575043694:38302..39404TCONS_00073291-exon-scaffold_9-1575043694:38302..39404Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:29817..39404 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.947877 1.40335 1.24336 0.949092 0 0 0 4.11978 2.72264 0.319769 0 0.62155 0 0 0.626422 0.119602 0 0 0 0 0 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073291 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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