TCONS_00073269 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073269
Unique NameTCONS_00073269
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1591

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073269 ID=TCONS_00073269|Name=TCONS_00073269|organism=Clytia hemisphaerica|type=transcript|length=1591bp
TGAATGTGTTGTGGAGCAAGGAATAGCATTGGGTGTGTTGTGGAGCAAGA
AATGGCATTGGGTATGTTGTGGAGCAAGGAATAGCATTGGGTGTGTTGTG
GAGCAAGGAATAGCACTAATTAACGTGAATTTGTTGGTTTGAAAAAAgga
gcaaaaacatttttagagcaaaaaagaaaaaataggcTAATAATAAAAAA
TGGGTTGATTCATCATTGGAGTTTGACTGGACGAGAAAAAAACGATTAAA
GGAATAGAAAGGCTGAAGAAATCTTTGTGAACATTTTTTTGAAGGTCAAA
AACACCCCTCCATTTGTTTTGGCATTGTCATTGACTGTACACACGAGAAA
CCCTGGGAACGCCTTTCCACTGGGTTATGAAGAAAATAAAGCACTGCAAG
TACAAACCTTGAGAGACGAATTTTCAAATAACGAAGATCAAGCTTTCTAC
GTAATGTCGaGGAATTCATTCAGTGATGAGCAAATTGCTGAAATTCGGAA
TGCTTTTTCAATGTTTGACAATGAAAAAGGAGTTATCTCCCATGTGGACA
TCATTGAAGTTATGAAGAGACTCGGTCAAAATCCAAGTGAAGAAGAAGTC
TTGAAAATGATCGAACCCATTGATAAAAACGGAGACCAGAAAGTGGAATT
TCACGAATTCGCCGAAATGATGAGAAATTATCTACAACAAATTGAGCCTC
AGCACGAAAACGAGGTCATCAAAAACATGTTTCAACTATTCGACAAAAAC
GACAATGGCTATATTTGTATGAAAGAATTACGGAAGATGCTAAAAACAAT
GGGCGAAAAAGTATCACACAAACaagtcaatgaaatgatgaaatttgCAG
ACCGGAATGGAGATGGCCATATTGATTTTGAAGAGTTTAAGAATTTGGTC
AACGAAGTACTGGTAACAGACAATGTCTCTTTATTTCTACGGTAACAAAT
GTGGTGAATGTAGCGGACGTTAGAAAAAGACGTCCTTTTATACGACGCTG
TAGAAGTAGGCACACAAATGAATTCTCAAAATAGCAGGGTCCACGTGTTG
AATCTGAAAGTGGGTAAGTGAGTGGGGCTAATAATAGTCGACAGGCAAGA
AAGTGTCTAAATGAGCTTTTTGTTACGACTTACGGGGAATAAAATATACA
GTTTGTCtactgaaattattttttttactttggaaACAATAAGGGTTGAT
GCACCCTTTACTCCACACTCAAACACCCATCTCCCCAATGAAGTGGGTCG
TAAATAGAGAAGAGAAAAACCAAGTCACCATCTGAACGATTAGACACTGA
TTACTGATTTTTTCGAGCACGCACAACCTTGCCTCACTGACCCAAAGAGT
AATATCGCTTTTCTAGttgcccttaaaaatgaaattcgaGGGTAACATTT
TCATAGAGAAGGGCAAGGATGCTAAAGAGAAGATTTTGACTGAcatcttt
gaatattttttttgttgtaAATATGATGACAATGATATGCGAAAAGCTAA
AACAACGATGAGTTATAATGTATAATATGAAATATTTATCTAATTTTTAC
CATATTTGGACTTTTAATTTATGGattttgggaaaataatg
Run BLAST on NCBI

protein sequence of TCONS_00073269-protein

>TCONS_00073269-protein ID=TCONS_00073269-protein|Name=TCONS_00073269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=163bp
MSRNSFSDEQIAEIRNAFSMFDNEKGVISHVDIIEVMKRLGQNPSEEEVL
KMIEPIDKNGDQKVEFHEFAEMMRNYLQQIEPQHENEVIKNMFQLFDKND
NGYICMKELRKMLKTMGEKVSHKQVNEMMKFADRNGDGHIDFEEFKNLVN
EVLVTDNVSLFLR
Run BLAST on NCBI

transcript from alignment at scaffold_89:198631..208877-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073269 ID=TCONS_00073269|Name=TCONS_00073269|organism=Clytia hemisphaerica|type=transcript|length=10247bp|location=Sequence derived from alignment at scaffold_89:198631..208877- (Clytia hemisphaerica)
TGAATGTGTTGTGGAGCAAGGAATAGCATTGGGTGTGTTGTGGAGCAAGA
AATGGCATTGGGTATGTTGTGGAGCAAGGAATAGCATTGGGTGTGTTGTG
GAGCAAGGAATAGCAGTAGGTGTAATGTGGAGCAAGGGATACCGTTGGGT
GTGTTGTAGAGCAAGAAATAGCATTGGGTGTGTTGTTGAGCAAGGGATAG
CATCGTGTGTGTTGTAGAGCAAGGGATAGCATTGTGTGTGTTGTTGAGCA
AGGGATAGCATTGTGTGTGTTATAAAACAACCAATGTAATTGTTTGCGTT
GTGAAGCAAGGAAATATTATAAGCTGTGTCATCGAGCAATGATATTCTAT
ATTGGGCTATCGGGCATATATTCTAATACAAGAGTATGGTACCTAACTCC
GCTCAAAAAATGATATATGGGTTGACATGGGTGACTTGCTGTTGACATGG
TACATTTACTTACGAAACAAGATCAGTAGCGGAGAACAAGCCCTCTGTTC
TGGCCTCCCAAGAGAATCAAAAACGAGACGCCAATACGCCAATCCTCAAT
TTTTGTAGGACTTTTGACTCCTGTAGGGGGGAATTCTTATGCTCCTCTCG
GCTACCCTCCATACCCCAGAGTCTTTACTTGACAAGCGAATTCTATGCTT
GCTATGATTTCCTATCAAACCGATGAGTTGAATAGATCCAAAGAAGTCCG
AATGGGGTTTAAGGAGTTCATTTAGAAAGCAAATTGACAAGACACAAAGC
GAACTGAATTAGGATCTAGCAGATTCACATGAAAAGGTTCATTTTTAAGA
AATTAGATTCCATAGAAAAATCAATTAAGAGTTTGAAAATAGATTGAGGG
TATATTATAAAGAAGGAAAGCCGAAGACGGCAAAACTAAAATGGGGGTTG
AAAAAAAAGTAGGACCCTGGATAAAGCTATCCCCTTCTAGTCCTCGCTTT
TTTTCTTATCTTTTCAGCTAATTAACGTGAATTTGTTGGTTTGAAAAAAG
GAGCAAAAACATTTTTAGAGCAAAAAAGAAAAAATAGGCTAATAATAAAA
AATGGGTTGATTCATCATTGGAGTTTGACTGGACGAGAAAAAAACGATTA
AAGGAATAGAAAGGCTGAAGAAATCTTTGTGAACATTTTTTTGAAGGTCA
AAAACACCCCTCCATTTGTTTTGGCATTGTCATTGACTGTACACACGAGA
AACCCTGGGAACGCCTTTCCACTGGGTTATGAAGAAAATAAAGCACTGCA
AGTACAAACCTTGAGAGACGAATTTTCAAATAACGAAGATCAAGCTTTCT
ACGTAATGTCGGTAAGTAATTGTAGATAAATATTTGCTGGACACGACGGT
ATTTCAACGTTTATCTAACGTTACATAGGCTCAGAGCTTTATTTATTTCA
GAAAAGGTATACCAGTGTGGGAAAAAATGCTGCAAGGATTGATTAAATTT
ATGGCTGACGCTTTGATGACATTTCTGAGTTGAGTTTTTAACGACAAACT
TTGAGCTTAAGTCATGGCTACTTTTCTTTGCGTTGATTGCGCGCTGAAAA
AAGTTGATATTCGTCCTCACAGGTTGGAATATGATTTTGGCATGTGATTT
TCACGGTATCGTAGAACGTCTAATTTATCTCGATCTCGATACCGCTTCGA
TTAGTTATTTGATAAATATAATATATTTCTTATGTTTTAGAGGAATTCAT
TCAGTGATGAGCAAATTGCTGGTAAGTTCAAGGTCCCTTTTCACATTGAT
TGACATCTTAGTCTTAAGCGATCTCGTCCCCGTGTATTTCAGGGTTTATT
TAAGTTACTAATAGCGCTATCAGTAAGCATCAAAAAGCTGATAATACGCA
GGGAACGAGGTTGAGTCTTCATGTTGATGCAAAAAGCTCATTATTTTATC
CTAATGCGTGGAAATTGTCGATACCTCTTTTCACCTAAAGTGAAGGTGGC
TGTGTCCGAAAAGGTAGATACATCATTCAGATCAGAAAAATGAAAGACAG
GCGGCATAACGATCTCGAAGACGCTCACATAATCATTTTTGTGTCATATA
CAAGACCAACCTTAAGTGAACGTCTATAAGTAGGCTATTATGAAGGAAGA
GCATACAGCTACAGTGCGCATGGTTGTGGGCTAGAGCCCCCCTATGGGTC
ATATCAAAGATCCCTAAACAGTTGATAACCTCTCTGCTTGGTCCTTAACA
GTTAAGAATGGGATAATGGCGCCAGACAGTAAATGGCTTTTGGATAACTT
TATATAAATGTTTATGATTTTTCTAGAAATTCGGAATGCTTTTTCAATGT
TTGACAATGAAAAAGGAGTTATCTCCCATGTGGACATCATTGAAGTTATG
AAGAGACTCGGTCAAAATCCAAGTGAAGAAGAAGTCTTGAAAATGATCGA
ACCCATTGATAAAAACGGTAACAGCAAGCGCCCTAGCGAGCGACAAATAC
TTTTAATTATTTGATAAGGGGAGTTTAAAGGTTTTATTTTTATATAAGTG
TTCCCGTTCCATATCAGACACATATTTCATATCAGGGCTGTGTCTACCTT
TTGTTATATTATGCTGATATAAGCGAAAAAAATGTTTCTTTTCCTCTTTC
TGAACAATCTTGCTCCACATCCGTGTCAATCCAATGTGAAAAAATGTAAA
TCAAAATTGATGAGTAAGCAGACGATATCAATCTCATGTAAAAACAAAAC
CTTTAAATCTGGCTTATTCTCTTCCTGATAATCTAAACTAAATATCAGTA
CCTGTCAAAATGTAACTCCATTGCTCGTATCATTCAATGTCAATAGACAT
TTCCATAAATTACGTTACGAACATTACTTGCCTCGTTTTCAAATTATTGC
CATGATGATTAACTCCCAGCGGATTTTATTAAAACTCATTTCTATTCATC
ATAAAAGAATAATTTAATGTCTCAAGAGACATAATCACCATGGTAAAGGT
CTATTGGCCGAGTTTTCAATTTTCTGCCGAAAGGAAAAACTTTGAAGGAA
AACCAGATACCAGGAAGGACAAAAACTTTAATATTCTAGTGAAACTTTCT
TGATTTTCTTTAAATTCTAATCGTTCCTCTGTTTAGGAGACCAGAAAGTG
GAATTTCACGAATTCGCCGAAATGATGAGAAATTATCTACAACAAATTGA
GCCTCAGCACGAAAACGAGGTCATCAAAAACATGTTTCAACTATTCGACA
AAAACGACAATGGCTATATTTGGTAAGCTTGAAATATTACCCCTCTGTCC
CGAAGTTCTCAACAATTCTTGAAGATTTCTGAGTTTTTCATTGAATTTCT
AATTGAAAATTGTAACAAGAGCCACAAAGATGTGGTTAAATATTTCCTCC
AATAGCTCAGAGCATAGATTGTAGTCGCAGTCGAACCCCACAGATTATCC
TAAAGCCCCAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGTATG
TGCGGCGGTTTAAGGGTATGTTTTTCAAAATATCAGAAATGCACTGTAAG
GGTGGACTTTTGATAAATGCACTGTAAGGGTGGAAATTTCAGCAAATCTG
GAGAAAATTGCAAATTTTTGCTCAAAAATGTTGATTTTTTTTGGTCTAAA
AGAGTTTAAAATTTGAAAAAATGCACTGTAAGGGTATGAGCAAAGATTTA
TTATACACTGGATAAACGACTCATAAAATGATGGAGAGCGATCATTGTGT
TTTTATTGTTTCAGAAAACAATTGATGTTCAAGCTTTGTCCGCAAAGGAC
AACTGTCATGGTGGCTCGAAGATGTCTGATTTAAAAAAATGTTTATCAGT
CTTATTTAAAAAAAGTTCTCTAGCTATTTCTTTTTGTACATTTGCAGAAA
AAAAGTTTGAAAGTAAGGCTAACATACCAAGCTGGATACATTTGTGAAAT
CATCATTAGACAAGAAATTCAGACAAAATGCTTATAGTGACACGAAATTT
TCAATTGAAAATATCTTTCCAAGACTGTCCCCAGAAGAGCTGAAATTAGC
ATACATAAGACTTGAGTGTCTTGGCTCCACTGTGGTATGAAAATCCTTTG
GAGGCACGTGGTGGCAAGGTAGTTTTTATGTGGTTGAAGTTTGAAAATTT
CCGGTGTCAACATTCAATTTCTTATACACAACACGTCTTTTGCATCTTTC
TCACAGCTTGAAACGTCACAACGACTTATAATTANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAGTGGAAGAATC
TGACTCTCACAGGAAAGTTTTAAGTCTCTTTTGGGAATTGGATGAGTGGT
TTTCGATAAGAAATGCAATAAAAATCCTTCGAAAAAACATTTAATGAGGG
CATGAACACTGGACACCCATCTCCTTTGTCTTTTTGAAGATAGCACAGCT
AGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGAAACAATAGATTTTGA
TGATATACCACTTGGGAATACCTTGCTAACAACGTCAAAACTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAGAAATAAAAT
TATGACGGAATATTGTCGGATTTTTCATACCAATTTTGAAATACAGGCGG
CAACGAAGCTCGCTTCAAAGAGACAATAAAAGATATGTCCAGTCGTGTGA
ACAATAATATCATTACTGCGGACATAGCTAGTACACGAGAAATCGGCAAA
AATCTGTTACTTGTATATCCAGTGTATAATAAATCCTTGGTATGAATTTC
ACCGATTTTTTTCTGCACTGTAAGAGTGCGATTCTAAAAGCCAATTTTTT
CGCCGCACATACCAACAGTTGGTAAACCTCCCCGGGACTAAACTCCATGA
CATTTGTATCATTGATCATTAAATCACATCTTGGAACAATAGAGTTCCTT
GGTTCAATTATTGCAAGAATGTTTATCTTTGTCATTATGTGCAACATATT
ATCATTACATCATTGCCAGCAAGTTACATTGTATTGTCAGCTTTTGAGGT
TGTCAAACTTTGTTGAATTTGTAATCCTGGCACCTGAATGTGAAAGGAAA
GAAAAATTCAAAATTTCATAATGAGAAATAATCTCTTTACAGTAATCAAT
GCCAAATGTGTGGTCATTCGCTGAAATCTCCCAAAATAAAAGACTTTAAA
AGGGTGAGACTCTGCTTGATGGTTTGAGCTATGTTTGCCATGCATATATA
CTGAGCTATTAAAGAAGTTTACGGGAACGTACAAAAAGGACCATAGGGTA
CGTACAATAAGGTACACTGGGAACATACAATAAGGTTCACGGGAACATAC
AATAAGGTTCACAGGGAACGTACAATAAGGTACAAGGGGAACGTGCAATA
AGGTACAAGGGGAACGTACAATAAGGTACACGAGGAACGTACAATAAGAT
ACACTGGGAACGTACAATAAGGTTCACGGGGAACATACAATAAGGTACAA
GGGGAACGTACAATAAGGTACACGAGGAACGTACAATAAGATACACTGGG
AACGTACAATAAGGTTCACGGGGAACATACAATAAGGTACATGGAACGTA
CAATAAAAGGTACACTGGGAACGTACAATAAGGTACACTGGGGACATACA
ATAAGGTAGACGGGAACATAAAATAAGGTTCACGGGGAACATACAATAAG
GTACACGAGGAACGTACAATAAGATACACTGGGAACGTACAATAAGGTTC
ACGGGGAACATACAATAAGGTACACTGGGAACATACAATAAGGTTCACGG
GAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACAT
ACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATA
AGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTC
ACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGA
ACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATAC
AATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAG
GTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCAC
GGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAAC
ATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAA
TAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGT
TCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGG
GAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACAT
ACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATA
AGGTTCACGGGAACATACAATAAGGTACATGGGGTACGTACAATAATGTA
TACGGGGAACGGCACAATAAGATACACTGGAACGTACAATAAGGTACACG
GGGAGCGTACAAAAAGATACCCAGGAACACACAAAAAGGACCAACGGAGA
GCGTACAAAAGGTACCCTGAAAGCATTAAAAAAGGACCATGGGTAGTGTA
TAAAAAGGACCACACAAAACGTACCAAAGGATCCCAGAGAGCGCACAAAA
GATACAAGGGAGGGGAGTATACAAAAAAATAAACAGGGAGTAAAAGCATC
TATTATGATATATTTTCTTTCTAGTATCTGGCATCAAGGCTAAAAATGGG
GCACTGAGAAGAGCGCAAGCTTTTCCAAGTTTTGACCATTAATATCTAGA
CAATATATACATGATGGAAATCAGAAAGAAATTTATGCTCACCTTCTTCT
CAAGTCAAGATAGGAATGGATTGGATTTCCATGTATTTCAGCTTCTTTCT
CCACCCTTCTTCTTCTCCTTATGGGAAAGACAATAAATTCAGCATACACT
AGAGAAACTCAGGCAGTCCTCTGAGCTTTACACACAATCAGTTGTTTTAT
GAAAAGCTGGTAAAAACCCCTGCCATATTTTGATAGAAGGATACTATTTT
TTTCCCCGCCAAATCTTCGCGACGATTTTAAGTCACGTGACTGAAGAGCC
TAGCCATAATGTGCAGCACGAATAAAGAAAACATTAACAACGAAAATGGA
AGAAGAAGAAGAAACGGAAAAAGGCCGTTTTAACAAATATTCCCCTATAG
TAGGAAAATATTTAACAAAGCGTTAATAATTGGCGAGGGTCGTGACATAT
GTACAGGAACATGTACTCTAAAATTGTGACATCCTTGTCTCACTACTCTG
TACCAGAGTGTATCTCGCGTTTATCGCTTCGTAGTTTCGTAGTACACTCT
GTGCACATTGTCTGTTTGGTAAAATAATTCCCGTGCGGAGACCTCTGCGA
TAAAGTATGAGTTATAAATAGCAACAACTTCTCTCATCGTCTCCCCTCTC
TTACCAACACTTCATCGAAGCGGTCGGTTTGAAAAATCTTAAATGAGAAA
AGAAATGACAACAGACCCTCTACGTCAATGAATTTTGAAATTAGCCGTAG
ATACTGGGTCTGTGTACAGACAATTTTCTCACTGACTTACATGATATCCA
AGACATTAAACTGAAATAAAGNAGATATTGGATCTGTGTACAGACAATCT
TCTCACTGACTTACATGATATCCAAGACATCAAGCTGAAATAAAAAATAC
TGAAGTCTCAAATAAATCTAAATTTAAATTTTATGTTTTTTTCAGTATGA
AAGAATTACGGAAGATGCTAAAAACAATGGGCGAAAAAGTATCACACAAA
CAAGTCAATGAAATGATGAAATTTGCAGACCGGAATGGAGATGGCCATAT
TGATTTTGAAGGTAGAGAATACACCTTTTCAACCGTATTCGCGCGGTCAG
GGACATACCTCTTAATTATTTAATTACCCTCCTAAACTCGATCCAATCCT
TTTTTGATACATTTTTCTATTGTCCTATAGGTGGTCCTTTAGTGGGAACT
AAAGCGGACAAAAAGATGTCAGTGCGGCAATTGGCGGCTACGGTCGAAAA
GATGTATGAAACATCAATGATACTTAGGCTAGAGGCGAATCTTCAAACTT
TTCATTTCTCTAAATTTACATTGCCTAGCTTATTTGTCTCACAATTTTAA
TCGAGAGAAGCTTGGAAGCTGAGCTGAAATTAGCTGAAGTGACTCAGTTT
TGAGTTTGATTTGAAATCTTGTGGCAAAGTCAAAGTGATTTCATTTCTTA
GCTTTAATTCTTGTGGATAGGAAGTTTATCGCGGCTTGCATCACGAGATT
GACGTTTGGCTATGTTTCGAGAGATTCTTCTCCCATTATCGGGCAAGGTG
GAGGGTGTTTTCTCCACTATTTTTACACGCTTTTTTATAAGAAAACACTT
TATAAGAATGTCCATAATGAAAATGACCAAAAAATTAAGAATAATGCTAA
GAATATCACCATCATGGAATTTGGCTACTCATGCTAAGAATGTCATTTAG
AGCATTTTCAATTGTAAATTGCCAATTACCCCCAACTAAGGCTCACTCCT
TTCACAAAAATGCCATTTTATGCTTGAGAAGTATGTACTAAATGTAAAAT
CTAGTCTGAATTAGAATCTTAACCTGTATGTATAACCAGAATGCTGTAAG
AGTATTTTATGATGTTCCCAAAAAAGTTAAGAATATCCATGATATCCATG
ATGAAATAGATTTACACCTTATTCATATAAAAAAAGCTAACTAAGACCTT
AATCTGTATTTGTACTAAGTCCACTTTCTTTTGTTATAGAGTTTAAGAAT
TTGGTCAACGAAGTACTGGTAACAGACAATGTCTCTTTATTTCTACGGTA
ACAAATGTGGTGAATGTAGCGGACGTTAGAAAAAGACGTCCTTTTATACG
ACGCTGTAGAAGTAGGCACACAAATGAATTCTCAAAATAGCAGGGTCCAC
GTGTTGAATCTGAAAGTGGGTAAGTGAGTGGGGCTAATAATAGTCGACAG
GCAAGAAAGTGTCTAAATGAGCTTTTTGTTACGACTTACGGGGAATAAAA
TATACAGTTTGTCTACTGAAATTATTTTTTTTACTTTGGAAACAATAAGG
GTTGATGCACCCTTTACTCCACACTCAAACACCCATCTCCCCAATGAAGT
GGGTCGTAAATAGAGAAGAGAAAAACCAAGTCACCATCTGAACGATTAGA
CACTGATTACTGATTTTTTCGAGCACGCACAACCTTGCCTCACTGACCCA
AAGAGTAATATCGCTTTTCTAGTTGCCCTTAAAAATGAAATTCGAGGGTA
ACATTTTCATAGAGAAGGGCAAGGATGCTAAAGAGAAGATTTTGACTGAC
ATCTTTGAATATTTTTTTTGTTGTAAATATGATGACAATGATATGCGAAA
AGCTAAAACAACGATGAGTTATAATGTATAATATGAAATATTTATCTAAT
TTTTACCATATTTGGACTTTTAATTTATGGATTTTGGGAAAATAATG

Coding sequence (CDS) from alignment at scaffold_89:198631..208877-

>TCONS_00073269 ID=TCONS_00073269|Name=TCONS_00073269|organism=Clytia hemisphaerica|type=CDS|length=2952bp|location=Sequence derived from alignment at scaffold_89:198631..208877- (Clytia hemisphaerica)
AGTTTAAGAATTTGGTCAACGAAGTACTGGTAACAGACAATGTCTCTTTA
TTTCTACGGTAATATGAAAGAATTACGGAAGATGCTAAAAACAATGGGCG
AAAAAGTATCACACAAACAAGTCAATGAAATGATGAAATTTGCAGACCGG
AATGGAGATGGCCATATTGATTTTGAAGGAGACCAGAAAGTGGAATTTCA
CGAATTCGCCGAAATGATGAGAAATTATCTACAACAAATTGAGCCTCAGC
ACGAAAACGAGGTCATCAAAAACATGTTTCAACTATTCGACAAAAACGAC
AATGGCTATATTTGAAATTCGGAATGCTTTTTCAATGTTTGACAATGAAA
AAGGAGTTATCTCCCATGTGGACATCATTGAAGTTATGAAGAGACTCGGT
CAAAATCCAAGTGAAGAAGAAGTCTTGAAAATGATCGAACCCATTGATAA
AAACGAGGAATTCATTCAGTGATGAGCAAATTGCTGATGTCGAGTTTAAG
AATTTGGTCAACGAAGTACTGGTAACAGACAATGTCTCTTTATTTCTACG
GTAATATGAAAGAATTACGGAAGATGCTAAAAACAATGGGCGAAAAAGTA
TCACACAAACAAGTCAATGAAATGATGAAATTTGCAGACCGGAATGGAGA
TGGCCATATTGATTTTGAAGGAGACCAGAAAGTGGAATTTCACGAATTCG
CCGAAATGATGAGAAATTATCTACAACAAATTGAGCCTCAGCACGAAAAC
GAGGTCATCAAAAACATGTTTCAACTATTCGACAAAAACGACAATGGCTA
TATTTGAAATTCGGAATGCTTTTTCAATGTTTGACAATGAAAAAGGAGTT
ATCTCCCATGTGGACATCATTGAAGTTATGAAGAGACTCGGTCAAAATCC
AAGTGAAGAAGAAGTCTTGAAAATGATCGAACCCATTGATAAAAACGAGG
AATTCATTCAGTGATGAGCAAATTGCTGATGTCGAGTTTAAGAATTTGGT
CAACGAAGTACTGGTAACAGACAATGTCTCTTTATTTCTACGGTAATATG
AAAGAATTACGGAAGATGCTAAAAACAATGGGCGAAAAAGTATCACACAA
ACAAGTCAATGAAATGATGAAATTTGCAGACCGGAATGGAGATGGCCATA
TTGATTTTGAAGGAGACCAGAAAGTGGAATTTCACGAATTCGCCGAAATG
ATGAGAAATTATCTACAACAAATTGAGCCTCAGCACGAAAACGAGGTCAT
CAAAAACATGTTTCAACTATTCGACAAAAACGACAATGGCTATATTTGAA
ATTCGGAATGCTTTTTCAATGTTTGACAATGAAAAAGGAGTTATCTCCCA
TGTGGACATCATTGAAGTTATGAAGAGACTCGGTCAAAATCCAAGTGAAG
AAGAAGTCTTGAAAATGATCGAACCCATTGATAAAAACGAGGAATTCATT
CAGTGATGAGCAAATTGCTGATGTCGAGTTTAAGAATTTGGTCAACGAAG
TACTGGTAACAGACAATGTCTCTTTATTTCTACGGTAATATGAAAGAATT
ACGGAAGATGCTAAAAACAATGGGCGAAAAAGTATCACACAAACAAGTCA
ATGAAATGATGAAATTTGCAGACCGGAATGGAGATGGCCATATTGATTTT
GAAGGAGACCAGAAAGTGGAATTTCACGAATTCGCCGAAATGATGAGAAA
TTATCTACAACAAATTGAGCCTCAGCACGAAAACGAGGTCATCAAAAACA
TGTTTCAACTATTCGACAAAAACGACAATGGCTATATTTGAAATTCGGAA
TGCTTTTTCAATGTTTGACAATGAAAAAGGAGTTATCTCCCATGTGGACA
TCATTGAAGTTATGAAGAGACTCGGTCAAAATCCAAGTGAAGAAGAAGTC
TTGAAAATGATCGAACCCATTGATAAAAACGAGGAATTCATTCAGTGATG
AGCAAATTGCTGATGTCGAGTTTAAGAATTTGGTCAACGAAGTACTGGTA
ACAGACAATGTCTCTTTATTTCTACGGTAATATGAAAGAATTACGGAAGA
TGCTAAAAACAATGGGCGAAAAAGTATCACACAAACAAGTCAATGAAATG
ATGAAATTTGCAGACCGGAATGGAGATGGCCATATTGATTTTGAAGGAGA
CCAGAAAGTGGAATTTCACGAATTCGCCGAAATGATGAGAAATTATCTAC
AACAAATTGAGCCTCAGCACGAAAACGAGGTCATCAAAAACATGTTTCAA
CTATTCGACAAAAACGACAATGGCTATATTTGAAATTCGGAATGCTTTTT
CAATGTTTGACAATGAAAAAGGAGTTATCTCCCATGTGGACATCATTGAA
GTTATGAAGAGACTCGGTCAAAATCCAAGTGAAGAAGAAGTCTTGAAAAT
GATCGAACCCATTGATAAAAACGAGGAATTCATTCAGTGATGAGCAAATT
GCTGATGTCGAGTTTAAGAATTTGGTCAACGAAGTACTGGTAACAGACAA
TGTCTCTTTATTTCTACGGTAATATGAAAGAATTACGGAAGATGCTAAAA
ACAATGGGCGAAAAAGTATCACACAAACAAGTCAATGAAATGATGAAATT
TGCAGACCGGAATGGAGATGGCCATATTGATTTTGAAGGAGACCAGAAAG
TGGAATTTCACGAATTCGCCGAAATGATGAGAAATTATCTACAACAAATT
GAGCCTCAGCACGAAAACGAGGTCATCAAAAACATGTTTCAACTATTCGA
CAAAAACGACAATGGCTATATTTGAAATTCGGAATGCTTTTTCAATGTTT
GACAATGAAAAAGGAGTTATCTCCCATGTGGACATCATTGAAGTTATGAA
GAGACTCGGTCAAAATCCAAGTGAAGAAGAAGTCTTGAAAATGATCGAAC
CCATTGATAAAAACGAGGAATTCATTCAGTGATGAGCAAATTGCTGATGT
CG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045454XLOC_045454Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073269-proteinTCONS_00073269-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073269-exon-scaffold_89-1575043694:208763..208877TCONS_00073269-exon-scaffold_89-1575043694:208763..208877Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1575043694:207567..207910TCONS_00073269-exon-scaffold_89-1575043694:207567..207910Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1575043694:207157..207187TCONS_00073269-exon-scaffold_89-1575043694:207157..207187Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1575043694:206461..206601TCONS_00073269-exon-scaffold_89-1575043694:206461..206601Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1575043694:205656..205791TCONS_00073269-exon-scaffold_89-1575043694:205656..205791Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1575043694:200267..200382TCONS_00073269-exon-scaffold_89-1575043694:200267..200382Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1575043694:198631..199338TCONS_00073269-exon-scaffold_89-1575043694:198631..199338Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:208763..208877TCONS_00073269-exon-scaffold_89-1510915933:208763..208877Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:207567..207910TCONS_00073269-exon-scaffold_89-1510915933:207567..207910Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:207157..207187TCONS_00073269-exon-scaffold_89-1510915933:207157..207187Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:206461..206601TCONS_00073269-exon-scaffold_89-1510915933:206461..206601Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:205656..205791TCONS_00073269-exon-scaffold_89-1510915933:205656..205791Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:200267..200382TCONS_00073269-exon-scaffold_89-1510915933:200267..200382Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1510915933:198631..199338TCONS_00073269-exon-scaffold_89-1510915933:198631..199338Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:208763..208877TCONS_00073269-exon-scaffold_89-1491911889:208763..208877Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:207567..207910TCONS_00073269-exon-scaffold_89-1491911889:207567..207910Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:207157..207187TCONS_00073269-exon-scaffold_89-1491911889:207157..207187Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:206461..206601TCONS_00073269-exon-scaffold_89-1491911889:206461..206601Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:205656..205791TCONS_00073269-exon-scaffold_89-1491911889:205656..205791Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:200267..200382TCONS_00073269-exon-scaffold_89-1491911889:200267..200382Clytia hemisphaericaexon
TCONS_00073269-exon-scaffold_89-1491911889:198631..199338TCONS_00073269-exon-scaffold_89-1491911889:198631..199338Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:198631..208877 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.102685	0.150201	0.0581327	0	0.103858	0.136783	0.36305	0.494375	2.1849	1.60774	0.260085	1.38485	2.23659	2.25179	0.014577	0.0938602	1.81151	1.97525	3.92964	4.39765	4.26912	3.59565	2.67851	3.50556	5.20924	6.96139	6.44168	4.28262	0.0569863	0.02903
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
[Close]
BLAST of TCONS_00073269 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.778e-31
Identity = 57/148 (38.51%), Postives = 98/148 (66.22%), Query Frame = 1 
Query:  463 NSFSDEQIAEIRNAFSMFDNE-KGVISHVDIIEVMKRLGQNPSEEEVLKMIEPIDKNGDQKVEFHEFAEMMRNYLQQIEPQHENEVIKNMFQLFDKNDNGYICMKELRKMLKTMGEKVSHKQVNEMMKFADRNGDGHIDFEEFKNLVN 903
            +  ++EQIAE + AFS+FD +  G I+  ++  VM+ LGQNP+E E+  MI  +D +G+  ++F EF  MM   ++  + + E   I+  F++FDK+ NGYI   ELR ++  +GEK++ ++V+EM++ AD +GDG +++EEF  ++ 
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE---IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00073269 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM35.778e-3138.51Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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