TCONS_00073269-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073269-protein
Unique NameTCONS_00073269-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073269-protein ID=TCONS_00073269-protein|Name=TCONS_00073269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=163bp
MSRNSFSDEQIAEIRNAFSMFDNEKGVISHVDIIEVMKRLGQNPSEEEVL
KMIEPIDKNGDQKVEFHEFAEMMRNYLQQIEPQHENEVIKNMFQLFDKND
NGYICMKELRKMLKTMGEKVSHKQVNEMMKFADRNGDGHIDFEEFKNLVN
EVLVTDNVSLFLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045454XLOC_045454Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073269TCONS_00073269Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 124..152
e-value: 5.4E-7
score: 39.2
coord: 88..116
e-value: 2.2E-5
score: 33.9
coord: 13..40
e-value: 19.0
score: 7.5
coord: 48..76
e-value: 4.7E-4
score: 29.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 87..148
e-value: 1.0E-14
score: 54.6
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 24..75
e-value: 0.0015
score: 18.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 9..43
score: 8.516
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 120..155
score: 13.649
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 84..119
score: 15.657
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 44..79
score: 11.389
IPR002048EF-hand domainCDDcd00051EFhcoord: 89..149
e-value: 1.87608E-16
score: 68.7285
IPR002048EF-hand domainCDDcd00051EFhcoord: 13..74
e-value: 9.21941E-12
score: 56.0169
NoneNo IPR availableGENE3D1.10.238.10coord: 36..78
e-value: 3.3E-13
score: 48.8
coord: 112..154
e-value: 1.6E-16
score: 59.4
NoneNo IPR availableGENE3D1.10.238.10coord: 79..111
e-value: 1.6E-12
score: 46.7
coord: 1..35
e-value: 2.3E-13
score: 49.3
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 57..69
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 97..109
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 133..145
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 4..150

Blast
[Close]
BLAST of TCONS_00073269-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.109e-34
Identity = 57/143 (39.86%), Postives = 96/143 (67.13%), Query Frame = 0 
Query:    4 NSFSDEQIAEIRNAFSMFDNEK-GVISHVDIIEVMKRLGQNPSEEEVLKMIEPIDKNGDQKVEFHEFAEMMRNYLQQIEPQHENEVIKNMFQLFDKNDNGYICMKELRKMLKTMGEKVSHKQVNEMMKFADRNGDGHIDFEEF 145
            +  ++EQIAE + AFS+FD +  G I+  ++  VM+ LGQNP+E E+  MI  +D +G+  ++F EF  MM   ++  + + E   I+  F++FDK+ NGYI   ELR ++  +GEK++ ++V+EM++ AD +GDG +++EEF
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE---IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
The following BLAST results are available for this feature:
BLAST of TCONS_00073269-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.109e-3439.86Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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