XLOC_045454 (gene) - C. hemisphaerica

Overview
NameXLOC_045454
Unique NameXLOC_045454
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_89:198631..208877-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045454 ID=XLOC_045454|Name=XLOC_045454|organism=Clytia hemisphaerica|type=gene|length=10247bp|location=Sequence derived from alignment at scaffold_89:198631..208877- (Clytia hemisphaerica)
TGAATGTGTTGTGGAGCAAGGAATAGCATTGGGTGTGTTGTGGAGCAAGA
AATGGCATTGGGTATGTTGTGGAGCAAGGAATAGCATTGGGTGTGTTGTG
GAGCAAGGAATAGCAGTAGGTGTAATGTGGAGCAAGGGATACCGTTGGGT
GTGTTGTAGAGCAAGAAATAGCATTGGGTGTGTTGTTGAGCAAGGGATAG
CATCGTGTGTGTTGTAGAGCAAGGGATAGCATTGTGTGTGTTGTTGAGCA
AGGGATAGCATTGTGTGTGTTATAAAACAACCAATGTAATTGTTTGCGTT
GTGAAGCAAGGAAATATTATAAGCTGTGTCATCGAGCAATGATATTCTAT
ATTGGGCTATCGGGCATATATTCTAATACAAGAGTATGGTACCTAACTCC
GCTCAAAAAATGATATATGGGTTGACATGGGTGACTTGCTGTTGACATGG
TACATTTACTTACGAAACAAGATCAGTAGCGGAGAACAAGCCCTCTGTTC
TGGCCTCCCAAGAGAATCAAAAACGAGACGCCAATACGCCAATCCTCAAT
TTTTGTAGGACTTTTGACTCCTGTAGGGGGGAATTCTTATGCTCCTCTCG
GCTACCCTCCATACCCCAGAGTCTTTACTTGACAAGCGAATTCTATGCTT
GCTATGATTTCCTATCAAACCGATGAGTTGAATAGATCCAAAGAAGTCCG
AATGGGGTTTAAGGAGTTCATTTAGAAAGCAAATTGACAAGACACAAAGC
GAACTGAATTAGGATCTAGCAGATTCACATGAAAAGGTTCATTTTTAAGA
AATTAGATTCCATAGAAAAATCAATTAAGAGTTTGAAAATAGATTGAGGG
TATATTATAAAGAAGGAAAGCCGAAGACGGCAAAACTAAAATGGGGGTTG
AAAAAAAAGTAGGACCCTGGATAAAGCTATCCCCTTCTAGTCCTCGCTTT
TTTTCTTATCTTTTCAGCTAATTAACGTGAATTTGTTGGTTTGAAAAAAG
GAGCAAAAACATTTTTAGAGCAAAAAAGAAAAAATAGGCTAATAATAAAA
AATGGGTTGATTCATCATTGGAGTTTGACTGGACGAGAAAAAAACGATTA
AAGGAATAGAAAGGCTGAAGAAATCTTTGTGAACATTTTTTTGAAGGTCA
AAAACACCCCTCCATTTGTTTTGGCATTGTCATTGACTGTACACACGAGA
AACCCTGGGAACGCCTTTCCACTGGGTTATGAAGAAAATAAAGCACTGCA
AGTACAAACCTTGAGAGACGAATTTTCAAATAACGAAGATCAAGCTTTCT
ACGTAATGTCGGTAAGTAATTGTAGATAAATATTTGCTGGACACGACGGT
ATTTCAACGTTTATCTAACGTTACATAGGCTCAGAGCTTTATTTATTTCA
GAAAAGGTATACCAGTGTGGGAAAAAATGCTGCAAGGATTGATTAAATTT
ATGGCTGACGCTTTGATGACATTTCTGAGTTGAGTTTTTAACGACAAACT
TTGAGCTTAAGTCATGGCTACTTTTCTTTGCGTTGATTGCGCGCTGAAAA
AAGTTGATATTCGTCCTCACAGGTTGGAATATGATTTTGGCATGTGATTT
TCACGGTATCGTAGAACGTCTAATTTATCTCGATCTCGATACCGCTTCGA
TTAGTTATTTGATAAATATAATATATTTCTTATGTTTTAGAGGAATTCAT
TCAGTGATGAGCAAATTGCTGGTAAGTTCAAGGTCCCTTTTCACATTGAT
TGACATCTTAGTCTTAAGCGATCTCGTCCCCGTGTATTTCAGGGTTTATT
TAAGTTACTAATAGCGCTATCAGTAAGCATCAAAAAGCTGATAATACGCA
GGGAACGAGGTTGAGTCTTCATGTTGATGCAAAAAGCTCATTATTTTATC
CTAATGCGTGGAAATTGTCGATACCTCTTTTCACCTAAAGTGAAGGTGGC
TGTGTCCGAAAAGGTAGATACATCATTCAGATCAGAAAAATGAAAGACAG
GCGGCATAACGATCTCGAAGACGCTCACATAATCATTTTTGTGTCATATA
CAAGACCAACCTTAAGTGAACGTCTATAAGTAGGCTATTATGAAGGAAGA
GCATACAGCTACAGTGCGCATGGTTGTGGGCTAGAGCCCCCCTATGGGTC
ATATCAAAGATCCCTAAACAGTTGATAACCTCTCTGCTTGGTCCTTAACA
GTTAAGAATGGGATAATGGCGCCAGACAGTAAATGGCTTTTGGATAACTT
TATATAAATGTTTATGATTTTTCTAGAAATTCGGAATGCTTTTTCAATGT
TTGACAATGAAAAAGGAGTTATCTCCCATGTGGACATCATTGAAGTTATG
AAGAGACTCGGTCAAAATCCAAGTGAAGAAGAAGTCTTGAAAATGATCGA
ACCCATTGATAAAAACGGTAACAGCAAGCGCCCTAGCGAGCGACAAATAC
TTTTAATTATTTGATAAGGGGAGTTTAAAGGTTTTATTTTTATATAAGTG
TTCCCGTTCCATATCAGACACATATTTCATATCAGGGCTGTGTCTACCTT
TTGTTATATTATGCTGATATAAGCGAAAAAAATGTTTCTTTTCCTCTTTC
TGAACAATCTTGCTCCACATCCGTGTCAATCCAATGTGAAAAAATGTAAA
TCAAAATTGATGAGTAAGCAGACGATATCAATCTCATGTAAAAACAAAAC
CTTTAAATCTGGCTTATTCTCTTCCTGATAATCTAAACTAAATATCAGTA
CCTGTCAAAATGTAACTCCATTGCTCGTATCATTCAATGTCAATAGACAT
TTCCATAAATTACGTTACGAACATTACTTGCCTCGTTTTCAAATTATTGC
CATGATGATTAACTCCCAGCGGATTTTATTAAAACTCATTTCTATTCATC
ATAAAAGAATAATTTAATGTCTCAAGAGACATAATCACCATGGTAAAGGT
CTATTGGCCGAGTTTTCAATTTTCTGCCGAAAGGAAAAACTTTGAAGGAA
AACCAGATACCAGGAAGGACAAAAACTTTAATATTCTAGTGAAACTTTCT
TGATTTTCTTTAAATTCTAATCGTTCCTCTGTTTAGGAGACCAGAAAGTG
GAATTTCACGAATTCGCCGAAATGATGAGAAATTATCTACAACAAATTGA
GCCTCAGCACGAAAACGAGGTCATCAAAAACATGTTTCAACTATTCGACA
AAAACGACAATGGCTATATTTGGTAAGCTTGAAATATTACCCCTCTGTCC
CGAAGTTCTCAACAATTCTTGAAGATTTCTGAGTTTTTCATTGAATTTCT
AATTGAAAATTGTAACAAGAGCCACAAAGATGTGGTTAAATATTTCCTCC
AATAGCTCAGAGCATAGATTGTAGTCGCAGTCGAACCCCACAGATTATCC
TAAAGCCCCAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGTATG
TGCGGCGGTTTAAGGGTATGTTTTTCAAAATATCAGAAATGCACTGTAAG
GGTGGACTTTTGATAAATGCACTGTAAGGGTGGAAATTTCAGCAAATCTG
GAGAAAATTGCAAATTTTTGCTCAAAAATGTTGATTTTTTTTGGTCTAAA
AGAGTTTAAAATTTGAAAAAATGCACTGTAAGGGTATGAGCAAAGATTTA
TTATACACTGGATAAACGACTCATAAAATGATGGAGAGCGATCATTGTGT
TTTTATTGTTTCAGAAAACAATTGATGTTCAAGCTTTGTCCGCAAAGGAC
AACTGTCATGGTGGCTCGAAGATGTCTGATTTAAAAAAATGTTTATCAGT
CTTATTTAAAAAAAGTTCTCTAGCTATTTCTTTTTGTACATTTGCAGAAA
AAAAGTTTGAAAGTAAGGCTAACATACCAAGCTGGATACATTTGTGAAAT
CATCATTAGACAAGAAATTCAGACAAAATGCTTATAGTGACACGAAATTT
TCAATTGAAAATATCTTTCCAAGACTGTCCCCAGAAGAGCTGAAATTAGC
ATACATAAGACTTGAGTGTCTTGGCTCCACTGTGGTATGAAAATCCTTTG
GAGGCACGTGGTGGCAAGGTAGTTTTTATGTGGTTGAAGTTTGAAAATTT
CCGGTGTCAACATTCAATTTCTTATACACAACACGTCTTTTGCATCTTTC
TCACAGCTTGAAACGTCACAACGACTTATAATTANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAGTGGAAGAATC
TGACTCTCACAGGAAAGTTTTAAGTCTCTTTTGGGAATTGGATGAGTGGT
TTTCGATAAGAAATGCAATAAAAATCCTTCGAAAAAACATTTAATGAGGG
CATGAACACTGGACACCCATCTCCTTTGTCTTTTTGAAGATAGCACAGCT
AGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGAAACAATAGATTTTGA
TGATATACCACTTGGGAATACCTTGCTAACAACGTCAAAACTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAGAAATAAAAT
TATGACGGAATATTGTCGGATTTTTCATACCAATTTTGAAATACAGGCGG
CAACGAAGCTCGCTTCAAAGAGACAATAAAAGATATGTCCAGTCGTGTGA
ACAATAATATCATTACTGCGGACATAGCTAGTACACGAGAAATCGGCAAA
AATCTGTTACTTGTATATCCAGTGTATAATAAATCCTTGGTATGAATTTC
ACCGATTTTTTTCTGCACTGTAAGAGTGCGATTCTAAAAGCCAATTTTTT
CGCCGCACATACCAACAGTTGGTAAACCTCCCCGGGACTAAACTCCATGA
CATTTGTATCATTGATCATTAAATCACATCTTGGAACAATAGAGTTCCTT
GGTTCAATTATTGCAAGAATGTTTATCTTTGTCATTATGTGCAACATATT
ATCATTACATCATTGCCAGCAAGTTACATTGTATTGTCAGCTTTTGAGGT
TGTCAAACTTTGTTGAATTTGTAATCCTGGCACCTGAATGTGAAAGGAAA
GAAAAATTCAAAATTTCATAATGAGAAATAATCTCTTTACAGTAATCAAT
GCCAAATGTGTGGTCATTCGCTGAAATCTCCCAAAATAAAAGACTTTAAA
AGGGTGAGACTCTGCTTGATGGTTTGAGCTATGTTTGCCATGCATATATA
CTGAGCTATTAAAGAAGTTTACGGGAACGTACAAAAAGGACCATAGGGTA
CGTACAATAAGGTACACTGGGAACATACAATAAGGTTCACGGGAACATAC
AATAAGGTTCACAGGGAACGTACAATAAGGTACAAGGGGAACGTGCAATA
AGGTACAAGGGGAACGTACAATAAGGTACACGAGGAACGTACAATAAGAT
ACACTGGGAACGTACAATAAGGTTCACGGGGAACATACAATAAGGTACAA
GGGGAACGTACAATAAGGTACACGAGGAACGTACAATAAGATACACTGGG
AACGTACAATAAGGTTCACGGGGAACATACAATAAGGTACATGGAACGTA
CAATAAAAGGTACACTGGGAACGTACAATAAGGTACACTGGGGACATACA
ATAAGGTAGACGGGAACATAAAATAAGGTTCACGGGGAACATACAATAAG
GTACACGAGGAACGTACAATAAGATACACTGGGAACGTACAATAAGGTTC
ACGGGGAACATACAATAAGGTACACTGGGAACATACAATAAGGTTCACGG
GAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACAT
ACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATA
AGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTC
ACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGA
ACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATAC
AATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAG
GTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCAC
GGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAAC
ATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAA
TAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGT
TCACGGGAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGG
GAACATACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACAT
ACAATAAGGTTCACGGGAACATACAATAAGGTTCACGGGAACATACAATA
AGGTTCACGGGAACATACAATAAGGTACATGGGGTACGTACAATAATGTA
TACGGGGAACGGCACAATAAGATACACTGGAACGTACAATAAGGTACACG
GGGAGCGTACAAAAAGATACCCAGGAACACACAAAAAGGACCAACGGAGA
GCGTACAAAAGGTACCCTGAAAGCATTAAAAAAGGACCATGGGTAGTGTA
TAAAAAGGACCACACAAAACGTACCAAAGGATCCCAGAGAGCGCACAAAA
GATACAAGGGAGGGGAGTATACAAAAAAATAAACAGGGAGTAAAAGCATC
TATTATGATATATTTTCTTTCTAGTATCTGGCATCAAGGCTAAAAATGGG
GCACTGAGAAGAGCGCAAGCTTTTCCAAGTTTTGACCATTAATATCTAGA
CAATATATACATGATGGAAATCAGAAAGAAATTTATGCTCACCTTCTTCT
CAAGTCAAGATAGGAATGGATTGGATTTCCATGTATTTCAGCTTCTTTCT
CCACCCTTCTTCTTCTCCTTATGGGAAAGACAATAAATTCAGCATACACT
AGAGAAACTCAGGCAGTCCTCTGAGCTTTACACACAATCAGTTGTTTTAT
GAAAAGCTGGTAAAAACCCCTGCCATATTTTGATAGAAGGATACTATTTT
TTTCCCCGCCAAATCTTCGCGACGATTTTAAGTCACGTGACTGAAGAGCC
TAGCCATAATGTGCAGCACGAATAAAGAAAACATTAACAACGAAAATGGA
AGAAGAAGAAGAAACGGAAAAAGGCCGTTTTAACAAATATTCCCCTATAG
TAGGAAAATATTTAACAAAGCGTTAATAATTGGCGAGGGTCGTGACATAT
GTACAGGAACATGTACTCTAAAATTGTGACATCCTTGTCTCACTACTCTG
TACCAGAGTGTATCTCGCGTTTATCGCTTCGTAGTTTCGTAGTACACTCT
GTGCACATTGTCTGTTTGGTAAAATAATTCCCGTGCGGAGACCTCTGCGA
TAAAGTATGAGTTATAAATAGCAACAACTTCTCTCATCGTCTCCCCTCTC
TTACCAACACTTCATCGAAGCGGTCGGTTTGAAAAATCTTAAATGAGAAA
AGAAATGACAACAGACCCTCTACGTCAATGAATTTTGAAATTAGCCGTAG
ATACTGGGTCTGTGTACAGACAATTTTCTCACTGACTTACATGATATCCA
AGACATTAAACTGAAATAAAGNAGATATTGGATCTGTGTACAGACAATCT
TCTCACTGACTTACATGATATCCAAGACATCAAGCTGAAATAAAAAATAC
TGAAGTCTCAAATAAATCTAAATTTAAATTTTATGTTTTTTTCAGTATGA
AAGAATTACGGAAGATGCTAAAAACAATGGGCGAAAAAGTATCACACAAA
CAAGTCAATGAAATGATGAAATTTGCAGACCGGAATGGAGATGGCCATAT
TGATTTTGAAGGTAGAGAATACACCTTTTCAACCGTATTCGCGCGGTCAG
GGACATACCTCTTAATTATTTAATTACCCTCCTAAACTCGATCCAATCCT
TTTTTGATACATTTTTCTATTGTCCTATAGGTGGTCCTTTAGTGGGAACT
AAAGCGGACAAAAAGATGTCAGTGCGGCAATTGGCGGCTACGGTCGAAAA
GATGTATGAAACATCAATGATACTTAGGCTAGAGGCGAATCTTCAAACTT
TTCATTTCTCTAAATTTACATTGCCTAGCTTATTTGTCTCACAATTTTAA
TCGAGAGAAGCTTGGAAGCTGAGCTGAAATTAGCTGAAGTGACTCAGTTT
TGAGTTTGATTTGAAATCTTGTGGCAAAGTCAAAGTGATTTCATTTCTTA
GCTTTAATTCTTGTGGATAGGAAGTTTATCGCGGCTTGCATCACGAGATT
GACGTTTGGCTATGTTTCGAGAGATTCTTCTCCCATTATCGGGCAAGGTG
GAGGGTGTTTTCTCCACTATTTTTACACGCTTTTTTATAAGAAAACACTT
TATAAGAATGTCCATAATGAAAATGACCAAAAAATTAAGAATAATGCTAA
GAATATCACCATCATGGAATTTGGCTACTCATGCTAAGAATGTCATTTAG
AGCATTTTCAATTGTAAATTGCCAATTACCCCCAACTAAGGCTCACTCCT
TTCACAAAAATGCCATTTTATGCTTGAGAAGTATGTACTAAATGTAAAAT
CTAGTCTGAATTAGAATCTTAACCTGTATGTATAACCAGAATGCTGTAAG
AGTATTTTATGATGTTCCCAAAAAAGTTAAGAATATCCATGATATCCATG
ATGAAATAGATTTACACCTTATTCATATAAAAAAAGCTAACTAAGACCTT
AATCTGTATTTGTACTAAGTCCACTTTCTTTTGTTATAGAGTTTAAGAAT
TTGGTCAACGAAGTACTGGTAACAGACAATGTCTCTTTATTTCTACGGTA
ACAAATGTGGTGAATGTAGCGGACGTTAGAAAAAGACGTCCTTTTATACG
ACGCTGTAGAAGTAGGCACACAAATGAATTCTCAAAATAGCAGGGTCCAC
GTGTTGAATCTGAAAGTGGGTAAGTGAGTGGGGCTAATAATAGTCGACAG
GCAAGAAAGTGTCTAAATGAGCTTTTTGTTACGACTTACGGGGAATAAAA
TATACAGTTTGTCTACTGAAATTATTTTTTTTACTTTGGAAACAATAAGG
GTTGATGCACCCTTTACTCCACACTCAAACACCCATCTCCCCAATGAAGT
GGGTCGTAAATAGAGAAGAGAAAAACCAAGTCACCATCTGAACGATTAGA
CACTGATTACTGATTTTTTCGAGCACGCACAACCTTGCCTCACTGACCCA
AAGAGTAATATCGCTTTTCTAGTTGCCCTTAAAAATGAAATTCGAGGGTA
ACATTTTCATAGAGAAGGGCAAGGATGCTAAAGAGAAGATTTTGACTGAC
ATCTTTGAATATTTTTTTTGTTGTAAATATGATGACAATGATATGCGAAA
AGCTAAAACAACGATGAGTTATAATGTATAATATGAAATATTTATCTAAT
TTTTACCATATTTGGACTTTTAATTTATGGATTTTGGGAAAATAATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073269TCONS_00073269Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073269-proteinTCONS_00073269-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:198631..208877 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.15	0.06	0	0.1	0.14	0.36	0.49	2.18	1.61	0.26	1.38	2.24	2.25	0.01	0.09	1.81	1.98	3.93	4.4	4.27	3.6	2.68	3.51	5.21	6.96	6.44	4.28	0.06	0.03