TCONS_00072909 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072909
Unique NameTCONS_00072909
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1264

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072909 ID=TCONS_00072909|Name=TCONS_00072909|organism=Clytia hemisphaerica|type=transcript|length=1264bp
GAGGTTTTGAGTCATGGTTTTGTTTATTATCAATATGGGTCATTATGAAG
ACGAAGTTTCACGCGGGAAATATTTATACCAACATTGATCAAAATATTCT
CATTTCACCTTTCCTGATAAATTTTCTGAGAATGTGGATACTGAAATCAC
AAAGTGAAGAAAATGCTACAGGTGATTGTTACTACCTTTTACCGAAGCGA
AAATATGTGGTGGGAAGGAAAGattgtGATATTGTTATTACTGGAGATGC
TTCGATCAGCAGAAAGCACTGCATCATTGAAGTCACGGAACTCGATGGCC
CTAATTGCACCTGCGTCATATTTACCGACACTTCAAAGACAGGCaccaaa
attaatgacgtcaaACTCAAATCTAAAGAGGAAACTGAAGCTCACGATAA
CAGTACCATTGCGTTTggtaaaatgaaatttcaacTACGACATCAAAAGT
ATTTAGTTGTACCCTCCTCAATAAAGAAATCAGAACAGAAGCAACTTCTA
GAGCCGGTTTCTAAACTAGGGGGAAGGCTCGTCAAAGAATGGAATGCAGA
AACGACACATCTTGTTATgaccaaaattatttttacaataaaGGTTGTGT
ACGCTCTTGCTTGTGGTAAACATATCGTCACTCCAAAGTTCTTTGAAGAT
ATTTTGGATTGCTGCGATAAGAAACTTGGCAAAAAACTCCCTGATGAAAA
GAATTATTTACCGGTGATACAAGAACAATCGATGATCAACATGAATGCGT
TGTTCTATCCTAATCAAGAACGTAGTCAGCtgtttgttggaaagatattc
gtTACCCTGTCTGCAACTCAGCACTCGCGGTTGAAACATGCGATCCAGTA
TAGTGGTGGCTCAATGATTTTACAAGAGAGTAGAGAGCAGAAAATCTTGA
AAAGTATATCAACCAGTCAAACTATGGTGATGGCTTTGGAGGGCCATGAA
GAAAGATCACTGTCCAAAGATCAATCAAAGTGGATGAAAGAGTTACAGAA
TATGCTTTCTACTCATGGATTGCGTGGTATTGGAGAATCTGAGATTGGAT
TGGCCCTCATCAACAATTCGCTTGAGAAATATTGCAATCCTGCTTCTAAA
AATGtgaaCGTATTCTGCACGACGACCGATACCCAGGCACTTTCTCAACA
ACAATCACAATTATCTGAGATGTCTCAAGTTATGCTACTACCGATCAGTC
ACAATaagTAAACGAAACGAATCAGAAGAAGACGACGCTACATCTAAAAA
ACCTAAAATGGTGG
Run BLAST on NCBI

transcript from alignment at scaffold_86:661799..676995+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072909 ID=TCONS_00072909|Name=TCONS_00072909|organism=Clytia hemisphaerica|type=transcript|length=15197bp|location=Sequence derived from alignment at scaffold_86:661799..676995+ (Clytia hemisphaerica)
GAGGTTTTGAGTCATGGTTTTGTTTATTATCAATATGGGTCATTATGAAG ACGAAGTTTCACGCGGGAAATATTTATACCAACATTGATCAAAATATTCT CATTTCACCTTTCCTGATAAATTTTCTGAGAATGTGGATACTGAAATCAC AAAGTGAAGAAAATGCTACAGGTAAAAATAGATCTATTAAAGATGTTTTG TCGATCATTTGACAGCACTCCGTGGTTATAGATTATTAAGATAAAATGAC atactttttaacaacttttttctatgtcatcatttttttgAAGCCCTTTT TGTTTGTGTAGTAAGTAGGAGAATGTGTCTTTCTATAGACCTTTTCGGCT tgccatccgccatattgaattgtaggcaaaaattatggtggccgaattgc tgtggtgaaattcccttagaaagtatgcaaaacatatgcaaaaagaaagt attaatataaaacttaccgTCAACTGCAATTGGTCGAAACACATGGGCGG GACTgcttgatatctggtctgtattttcacttactgttaatagacctttt ttcaaagaggccaccctgttgaatagacctttttttagataggccaccct gttgaataattatgtagtccagcagaaaaacaatgatacagtcatgcata attattacattatgcgtgatacagtaattatgcatgactgtatcatagac cttttttcaaagaggacatcctgttgaataattatgtagtccagccatta aaacaatgatagagccatacataattactgtatcatgcatattgtaataa ttatgcatggttttatcattgtgtttttctgctggactacataattattc aacagggtggttgcctctttgaaaaaaggtctattgtttttctgctggac tacataattattcaacagggtggcctctataaaaaaaggtctataattat gtagtccagcagaaaaacaatgataaaaccatgcataattattacaatat gcatgatacagtaattatgcatggctctattattgtttttatggctggac tacataattattcaacaggacgtcctctttgaaaaaaggtctattctctt tgacaaaaaatttgttttgataactgcaccaagtttatcaatcatacttc ttcgaggagcctgccgacgcaccggacttaacgaacacagAACACGCCAA AGTTCGGTGTATGTAAAATGAGAactttttttaccaccggacaatctcta caccggacttaaggaagtcggatgtccggtgtcggagaaggatatttctT TCCCCGGACAATCagaacaccggacatgaccagtccggtgcgtccagtgt ttcttaattttttgtttcataaatgtccggcatccaaaatttcctgtctg cAACACCGggctgacaccggacttattgcgtccggtgtagcaaaaggata ctttttgccaccggacaaatacaccggaagtctgcgtcggcagggtcctc ttctttgttcctcttagagtgcacagacacttgCCACGCATTGttgtgtg ttccactacggattttttatagatttcgatttaaaagcctactcggtgcg aaagagaaattgtgtgttttaatatgccgttcattaactcaaatcaaatg acttcggaggttcggtgaaatggtggccgaattgctatGCCgttccatgt tttgtcagataatcccaagttagagcagttgacggtacatgcataattgg tattatattaaagtgtaatcttgtagaagaaagattaaatttgcttcttt tgaaaactagaaataatcaaattttgctccatctcttagaacaagcactt caaaaaaccataacattagacataaactcaagctgaaaaatcacccgcga aggtagaaaaataatccttattcggctgacggtaaattattctcctgggg aATAAAACCGCCAAACCAGgccaaacgatcaaatcaaaacattgatctga acctgctgaatgtgtgacgtcataattactgcttacaatttgcgtgtttt gaaagtttgatgtgtgtactccgtcttggtggaattttttaatggcatga aaatagaatatgcaatgtctttaagaacaaatttctaaaaggcttttgtt gttctgtaaatatttctttttggtttaagaaattccatcttttactgttc taatgattataatatttctttataagatgctttgttgtctttttaatctt tgtgtaaacttgcatatgttttgcatattttccaactaaatccaaccatc AGCAATTCTGACCTTCCGaatattcctatctctaaagataGGTGTCAAAA TTAAAAGGGGGATGTAGATACCGGGTGTGTAAAAAAAACGCCCCTATTTT ACAATCTATGACGTACATTTTTCTATTCAGTTGAACggcttgaatttttt tgtgagtaTTGTACGTTTTATTTCTAAACATTTCTAAAAGTTTGGCAAAC TTACCTCAAATGAATTTAATAAAGTTATGAATATTCTCGCAAGATCAGGC GAacccgaaaaaattttttgtttccggtccaccggccgggtgaaaattta ttttgtcgtcacccggccgcattttttttttcgtacatcatcgttagggt tagggttagtttgtttatttggaaaactttcgtgaatcagtttttgaggc gtgtgatttatcgcacgtgatattttatattctactgtaaaatgcacgcc tagaaatcacttggaatgaaggttttatcctgatcattgttatagaaact gatagaaatgaaattttattcatctcaaactaaaccctgcattgtttttg ttaattcttgcttgcaactcaaTTTTTAAGtatgttttttttcatataca acttggtttttataaaagaatcatgctgatttgtgagtaaaataaataga aacattcacaaagtggggacttttcagtaagtaaacagctttgtttttat NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTCATTTTAACTTCtacgagtgctttaaaaaatcgagt tttgggatcgaaatttagcaaaaaaaaattttttgcggccggccgggtga gtgttttttttgtcacccggtggaccggaaacaaaaatatttttagggtt cgcCTCACTACTTTTTATGTTGTTCACAGAAGCAATTGATTGACGTCAAA GAAGACGTCAAACCTTTACATATTCTAGCTTTCCTATCAGCTGTAAAAAC CGTTTTAAAGTGAAATTGAAGTTTAAGCTAGATGTAGAAGGGAATATTCC TACtaaaccaaaaatttttaatgtcaaacttatcttgttttcaaattcaa gGGGTTTTGGGAATCTTTTCGCAGTGTTATCGTAACTTCTCAAGGTGTTC AAGGCAATGTAAAGAAAGCATTTCTtagcaaaacaaattttcatcaattc gTTTCATTTCCATTATTTAATCGATCATATTATATTATACAAGCTCTGTT CTGCTTCTTTAACATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNGCTCTGTTCTGCTTCTTTAACATTTTGCAAAACAGTTG AACTGAAAACCTAAGGATTTTGATGTACAAAAGGTAATAACATCGGTTCA TTTCTGCACCATTGAGACaatttgaaagtatttttttgtcGTCGCAATTG ACGTTAAAAAATGGCTTGGTTGGAACTAGCTAGAATCTAACAAATATTGA CCTTGGAACAAAACTTAacctatgaaatgaaaaaatgatgCCATTATAAT GTTTTAAAAGTAGCGAGACAAAATAAGAGCGTAAAAACGAAGCGTAGTTT AGTTCCTTGTTCGATATGGGAAAATTTAACTATGAAAATCTGTGaacaat gaaaaattgacctACGTCAGCGAAATTATTATAAAGTCACTTTAAAATGA ACATacaaatgtataattttcaccaagggtaaaaaattaaattttaaatc gtccctaaaaatttcatttatctttgttcaatagaaatttgtacgccaaa aatcgaaaaataggcGCGTTTTTTTTACACACCCGGTATTATATGAATTT ACAGTACTTGTCTTGTGCTCAAAGGAGAAATCAATGCTCTTATTTTCTGA GGGAAAAAAATGActtgtttgtatttttgataaaggaaaatgactttttt cTTACTTGCGAAGGAAGTTGACTTGTTCTGTAtgttcaaaggaaaatgaa cttgTTTTGTAGTTTCAAAtaccttttttgtattttctatgACAATTGAA TTGTTCCGTATTTTCAAAGGGAAAAGATTAGttctgtattttcaaaggaa attaaCTTGCTCCatatattttatgttcaatgaaaaattaaggctctaat ttctgagaaaaatgacttgtttcttattttcaaagGAGTTGACTTGTTTT TTAGTTTCAAAtaccttttttgtattttctacgACAATTGAATTGttccg tattttcaaaggaaaaagacTAGttctgtattttcaaaggaaaaagactt gttttgtattttcaaaggaaattaaCTTGCTCCatatattttatgttcaa tGAAAAATCAATGCTctgatttctgagaaaaatgaCTTGTTTCTTACTTT CAAAGGAAGTTGACTTGTTCTGTATGCTCAAAGGAAAATAAATGACTTGT TTTGTAGTTTCAAAtaccttttttgtattttctacgACAATTGAATTGtt ccgtattttcaaaggaaaaagacTAGttccgtattttcaaaggaaattaa CTTGTtccatactcccaaaggaagttgaCGTATTCTGTATTTTCATTGAC CTTTTCtgtattttttaagaaaaatgagttgttttgtatttttcacaAAG GAAAATGACTGCTCTATTTTCAATAATAAATGACTTTTTTCATACTTAGG ATAATGACATGTTCTGTATTCTTAtgtattttgaaaggaaaatgacttat ttttgtACTTTCAAATACCTTTTCCGTATTTTCTATGGCCATTGACTTGT TCCGTAATGCCCAAGGAAGTTGATTTGttctgtatttaaaaaaaaattga cttgttCTGTATTTTCGGAGGACATTGACTTTTTctgtattttctaagga aaaatgAGTTGTTTTTTGATAAAGGAAAATGACATGTTTTGTACTTTCAT ATACCTTTTCcgtattttaaaaggaaaaaggCTGGTaccgtattttcaaa ggaaaaagacTTGTATAgtattttctaaggaaattAATTTGTATGttaat tttatgttcaatgAAAAATCAATGCTCtgattttctgagaaaaataaCTT GTTTCTTACTATCAAAGGAAGTTGACTTGTTCTGTATGCTCAAAGAAAAA TGACTTGATTTGTAGTTTCAAatacttttttgtattttttacgACAATTG AATTGttccgtattttcaaaggaaaaagacTAGtttcgtattttcaaagg aaaaagacttgttttgtattttcaaaggaaaataacTTGTtccatactcc caaaggaagttgaTGTGTTCTGTATTTTTTTAAGGATGATGAgttggttt ttatttttaataaaggAAAATGACTTTTATGTTCAATAAATAATGACTTC TTTCATACTTTCTAAGGATACTGACATGTTccatatttttatagaaaagt gACTTGTTCTGTATGTTCAAAGGAAAATGACTTGTTTTGTACTTTCAAGT AccttttttttagtattttctaCAGCAATTGACTTGTTTTGTATAAAGGA TATTTATTAACTTGACTTTTCTCTATATTTGATAAAGAATTACTTCTTTC ATACTTTCAAAGGAAATGACTTGTTCCATATTTTCTACGGAAAATGACTT CTCCAATGTTAGGGAAACCActtgttttgtattttctaaGGAAGTTGTTT TTGTTCCATATTCCAAGAAGAATTTCTGTATTCTCAAAGacagattttta gatttttaaggaagatttcatattttcaaaagaaaatgatgacttcaaag attttttaatgGAATTTTAAGTTGCtctttattttcaaaggaaatgaTTT TTCAGTGTGTACATAATACATGGTGAGTGGTGCTTtatttgtatcttttt tataTCTGTATAGGTGATTGTTACTACCTTTTACCGAAGCGAAAATATGT GGTGGGAAGGAAAGGTTTGTGATTCCTTACTATTTTTCTATTATatctat ccgcagacacgtgTTTCATTCTTCGCAAGTGCAGCTCGGGTAAGCGAGCA CAGACTGCTGTTGTCACTagagtgctcaaaacactaagTATTGAGCTTTG CATAATCGTTTGTAGTAAACGGAGAAGCAGAGCTTGCTCCTCAACTGAAG TTCTGACTATAATACATTATCcgcagacacatatttcatctGTATTGGAT TTCGTCTGTATGTATTTTtctattataaaaataattgaaaattcgCATCT TTTGTCCACTGTGGTCTTAAACATCAAATTAAATTAGCTGATTTTTTCCT GAGTGTGATTAATTACATGCGtctcgtgccctcgtgggtcgtgccttcgt gcctcgtgcgtcccgtgccctcgtgccttcgtgccctcgtgggtcccgta aaaaattacgtgggtagttcgtgggtcccaaaaaaaattacgttttaCAT TTTACAAACACGAAGAAAATTACTTAAAATAACTCCTATTATActtatct ttgaaaaaaaaattactttaaattttttttttttaaataaaagcacatgg tttgACATATTACGAGACACTCGCGTGTGGGTACGAGtgaaatttgaggg cacgtggTCCAAGCgtgatttaaaattaaaaaattgctgATCTGGAAGTT GATTTTCCATGTGGTTAAGCTCAGCATAAAAGGAAGTCCCGAACGAAGTA ACAGTTCTGAAAGTTGATAGAAGGCCCGGGGTCTAATACTTGTCGATCGA CGGAAGTGTGCCTCTAAAGCTCGAAAATTGGACCCTGCTTGGGACtcatc ttttcaaaaaagtgaccCAGGCTGGGACTTAAAGAGGAATATTGTTCTCC TTAAAGCAATACTTCGAAACAAGCAAAACTAAATAAAGATCTTTTCTAAT TGGatgaaaaaggagaaaaatgtGAGACGCATgctttttacttttcatca actggctttcttttttattataagtgatGAATATAGTgttaattataaga actttctgaAAGAGGCAgggatttttaaatatttaaattgaAGTTTGGCA TTAGAAATCCTCTCATATCTCAAGCATCACACTGAaatacaacttgaaat tttgcacaaagatagtcTGATAGTACCATGTTTCCCTagtataaaaattt ttaatattcaatgtcaattatttttggaaatttgtattcAAAAATGGTGT TTTCATTTTGGCGAGATCGTATGTTGTCTCAAACTATAGCTTTAAGGAGA ACAATAACCGATTAAACTATCAAATTTATCCCAACAAATTCTCCAAAGAA GATTCCACACAATTACAAGGACACACGTGACTACTGAACACACAAATCat tttctggacccacgaaatCGTTTTCCGGACTCACAAAATCAtcttcagga cccacgtaattttttttcaggacccacgtaattttctCAGGACCCACCTG CCACGTTATTCTTTCAGGACCTATGTAATTAtttaggacccacgtaattc TTTTCAGGACCCACATAATTCTTTTCAGGAtccacgaactacccacgagg gcacgaaggcacgtgaCGCACGAGGGCACGTGACGCACGACCCAAGAGAG CACGGGACGCGCGTAATTAATCACACTCATTTTTCCTTATTGACTTTAAC TTCTCTACTTctttatgaatttatttttatttttcagattgtGATATTGT TATTACTGGAGATGCTTCGATCAGCAGAAAGCACTGCATCATTGAAGTCA CGGTAAGCTTTATACCTTTTAATTTTGGTGTACTTGTTCAATGGGAGctc aaaagaatatttaaaaactttttgattctTTGATACTTATCTTCTGAGTC CTGAGAAAATcttatacatatttttttaactcaattattttcaaaaattg agataTTTCACATTCTGAAAATGAGTCTTTGCACCTTTACTAGATAACCG AAAAATGAAACTAATAATAGTAGTTCTATTGACTAGAAAGTCCTGGAACA ATTCTGAAGAGGGACCTAGTATTTTTATCAGAATGTAGAATACTTAAACC TATCAAACAATTAATAACGCTTGAATAATATGTCTACCACACAAAATTTT CGCATTTTTAGTCGAAGCTTTATGCCCTTTAATTTACAGGTATTTTCATG TTAGCTTTGCTTTTATATTCAGGAACTCGATGGCCCTAATTGCACCTGCG TCATATTTACCGACACTTCAAAGACAGGCaccaaaattaatgacgtcaaA CTCAAATCTAAAGAGGAAACTGAAGCTCACGATAACAGTACCATTGCGTT TggtaaaatgaaatttcagtaaGTGGGATATATTGTTGTTATATTTTTAC AAACTCTCTCCACTTTGCATTTTGCGCCATGTCAGCCAAATGTCACTCCT AGGTCAAAAGACATTGATGTCAATGTTTGTATGGATATACTTTCAATCAT TTTGTCGCAAGCTGTCAATATAAGTAATGGACCGTCTATGCAAAAAATCG ACTGTAAACAATATTGACGGTCAATATGTCAATTTtagttttcaataaaa ttgatggACAGtcaatataaattttttttttctcgataatTTTTATTTGA CGTTCAATAAAACTTGCTGAAAGTCAACgaaaaacattgaacatgggaaa ctttaaaataacttttaccccctggaaaaataaaaaaaagctcCTTTAAA TCCCCGGAAATTTTCCCGGGTTACCCTCTTGGATAGTTCGTCCACTCCAT GTATGGATATAAGATAGAATCGTCTAATTATTCGTTAGAGCTGCTCCTAG ATTTGTCGTGTTGTTACCATTACCAGGTTTTTTAAACGTAATCTTATCAA ATCTGTCTCACTCCACTTAAACGATATTGGAGGAACAATGTATGACTCAA ATGAGAGGATTATAATTTGTAGAGGCTTTTGTTTTGTACCATATTGCCCA CAAGATTTTAGTATatataatgttttttcttttagacTACGACATCAAAA GTATTTAGTTGTACCCTCCTCAATAAAGAAATCAGAACAGAAGCAACTTC TAGAGCCGGTTTCTAAACTAGGTACACAGTATGATATTATTTCGTTTAGA TGAGTTATTGgcgttaaaggttttattctcaacttcaattgagctagaat ctgacaatgtatgtatgtgtgtgtgtctgtccgaaaactttggggcaggc tggagacttggctgaaatttggcacacttgttccttgggtgaatatctgg ggggtgtttttttcattttttgaaaattttcatttttaagggtgtggtca cgagttttcaccaaaacgaggctaaaactttggggcaggctggagacgta aaaaatggtcggatttggctgaaaattagcacacttgttccttgggtgaa tatatggggtttattttttatttttttatgaaaattttcatttttaaggg cgtggtcacgagtttttgccaaaacgaggctaaaactttggggcaggctg gcgacttcaaaaatgatcagatttggccgaaattttgcacacttgatacT TGGGCGAATCCCTGGGGacgtttttttcattctttcaaaatttccatttt caagggcgtggtcacgagttttcgccaaaacgaggttAAAACTTTTAGGC AGGCTGAGACTTCAAGGGCGAATCCCTCAGGGtggttttcattattttaa aatttccattttaagggggtggtcacgagttttcgccaaaacgaggttAA AACTTTTAGGCAGGCTGAGACTTCAAGGGCGAATCCCTGTGGGtggtttt cattattttaaaatttccattttaatGGGTGGTCTCATTcattttttagt tgaaattggttacaattttacaatttggcctacgaatgatttaaaaacac tgaagttgagcccagtgcggttagcacgttcgacagtttttacataagtg ttcacgtttcatatcagacacatatttcatatcacgACGGTGtttcccta ttgttatattattcttgttttttcctctttctgacaaatcttgctccaca tccgtgtcaattcaatgtgaaaaggcttgtaaatttaaattgaactaaaa aaaacgAGATCACtcctatttaaaaacaaaacctttagtgctttattgaa aataattcttTGACAGGCTTTAAGCGTATCAGATTCCTTCATATTGATGC CTTCCTTAGAGCGATTCACAGAGTGCCGGCCAATCTTATATAGTATAATA TAGTATTGTTCCTTACCTATTACATAAAAGGTCTTTCATAAACTTGGTCA TTTCAAATAAATGTATTCTCTCAAAGGATTTTAttcctttaaaaaatatt aaaaattaaaCTATATTATTGCAGGTCTGAAATTATTATTTCAacaacga ggcaagtgatgttgaTGAGGAAATGTTACGAGAAGATCTATCCCTCCGCC TATTCAATTATGATTCGTTTTATCTTTAGGGGGAAGGCTCGTCAAAGAAT GGAATGCAGAAACGACACATCTTGTTATgaccaaaattatttttacaata aaGGTAAGAAGTTGGTAGAGTTTTTAGATTTAATATTACATCAATATAAG GAAAATAACATTAACTCTTaggttttattttaatgaccaaataTTTTCTA GGTTTCTTATATTTGGTCCATCAACATTGGTTTCCAATATATATTGGTAT TTTACAACCTTGTTCCCGCATATTATCGGCTTTTTTATACCTACTGATAG CGCCAGGTAGCGTATTGGCATCAGCCAataccagggtattctctggcgtc catcaatAACGTAAATTAAGCgagggatacacggggacgaggttgggtaT ATCCTGCTTATCGGCGTGCATAATAATGTTGAACATGTTTTAATGAATAA TTTGATAATCATAATGTTTTATATTCCCATTTCTTTATAGGTTGTGTACG CTCTTGCTTGTGGTAAACATATCGTCACTCCAAAGTTCTTTGAAGATATT TTGGATTGCTGCGATAAGAAACTTGGCAAAAAACTCCCTGATGAAAAGAA GTAAGCTTTCGATGTCTGCAATTTTGTTGTTGAACCTGAAGAGAACGTAT ACTTTCTTGTCTTTGGGGTTTCTTGGGAATGCNTTGAACCTATAGAGAAC GTATACTTCCTTGTCTTTGGGGTTTCTTTGGAATGTTGTGCATGATGTGA AACGAGGACGAGGATATTAAAGTGTATTTATTAAAGTCATTAAAAAGATG ATTTTATGGTATTTTTTTGTTAGCAGGATACTAACTACAGACAAGTTTTC ATTCATAAAACGGTTTCTGTTTGCTCCTTTTCCATTATATAAACTCGAAC GGCTTTCTTTGAGACTTGACTGTACGTGATGAACCTGTTTGCGTTTCTTT CAGTTATTTACCGGTGATACAAGAACAATCGATGATCAACATGAATGCGT TGTTCTATCCTAATCAAGAACGTAGTCAGCtgtttgttggaaagatattc gtTACCCTGTCTGCAACTCAGGTAAACATTTCTGGGACTGGATGAAAAGC TCTACAAAATACCTAACGAGACTCTTTCAATAAAACAGAAGAATAACAAA GAATCTAAAATTCCAAACAAAAACCGTCCCCCTACGAGATAACTAAATAT TTTGTGTGACCTATTTTGTATCACAATTTGCCTCGTCGCGCgtattgatt ttaatttttaacaatagacgatatcggcttaacatgaaaactcagatttg atccccgagaattccccacaatgctttgcgcggaaaataTTTCACCGCGA ACTTTTTTCCGCgtaaagcattgtggggaattctcggggatcaaatctga gttttcatgttaagccgatatcgtgtATTGCATACCTTCCGTCAACTTTC TTCATCTACCATCAACCCCGTCAAAATCGATAGAAACAGAAAATACTCTT AGGTTTGAACGAGCTTCAGACCCGTCTAGAACCTGAAAGAAATCATACTG AAATGATAAATTGTAACGGTTTATAGGATGTTAAAAAATATCTTGCATTG TGGAAAGATTTTGcctgaatagaccttttcggagattttgatttttctaa aacagcgatgcattttgggattgtttcgggggtattacaatagaactccc tcgaggaattcctaagagatttctattataatacccccgaaacgatccca caatgcatcgcttttttagaaaaattaaaaactccgataagatctatttc aTAAATCGACTGAGAAATTAGCGTATCGAGCGTTCGatactgttttattt ttgtagCACTCGCGGTTGAAACATGCGATCCAGTATAGTGGTGGCTCAAT GATTTTACAAGAGAGTAGAGAGCAGAAAATCTTGAAAAGTATATCAACCA GTCAAACTATGGTGATGGCTTTGGAGGGCCATGAAGAAAGATCACTGTCC AAAGATCAATCAAAGTGGATGAAAGAGTTACAGAATATGCTTTCTACGTA AGTTGTTCTTACTATATTTGATTCCCTCCTAAAACGAACTTGCACTCGTG TTTGCTCTAACTACAGAGGTATCTTATAAGAATTCCGTAGAGAATTTCCC CGCTGCCCACTATTTCTCTCATAGTTATCCCCTTTTGACATGTCCCAGCT TAGATGCTGATAGGGACCAGGTTTACGCTTTTATGCTTTGAGTCCATGCC ACTCAACTGGAACGATTGattattttatttgatattcAAGTCATGGCAGA CCTGGCTGTAATTACTGTATTTAATCTCTCGATTGTTATCTATTTCAGTC ATGGATTGCGTGGTATTGGAGAATCTGAGATTGGATTGGCCCTCATCAAC AATTCGCTTGAGAAATATTGCAATCCTGCTTCTAAAAATGGTATGGATAT TGTTATTAAATTAGTTAAATAGGTTTTTAATGTTATGTTAAGTTACTtaa cttccgccattatggaagtaaacgttcgatttgcgtaagggatcGTCCTT ACAGATTCGAacatttgcttccataatggcgtaAATTACCTAGCtcaaca aaacatgaaaaaaaacgAAGATGGGTTATCTGGAAGGTCAACTGATGCTT ATCCgggggtaaaacccgttgtccgggggtctaaaagtcactttgtccgg ggggtaaatcactgaaaattattATACCCTCtaacccccatattcaattt ttttctggaaaagcccaatacaaTCATAATATTTACCATGCCAGCCGACA TGAGATAAGAGGGTTAAAGGAGATTCGATTTCATTAAAATAACTCAATCA AGTtagttgttttaatttttttgaatttttatttttagtgaaCGTATTCT GCACGACGACCGATACCCAGGCACTTTCTCAACAACAATCACAATTATCT GAGATGTCTCAAGTTATGCTACTACCGATCAGTCACAATaaggttttttc aatttttccacAAGCCTCTCTAAACTACAATCCCACACAAAATATCTGAG ATAAAGTGGATTTCTAAGATTTCTAAGCGCGTTAGATTagagttggaaag tagagttttaattctcacccgaactttaaattctgaaaaacgttaaaata cactaaagtgtagaaaaaaaaatctcacacGTAGTAGTGTCGCCTATAAT TTTAACTTTTCCTTTTAACTTAATATTTCTCAAAGCAAGCTAAGTGGCTT TAATTTCCATTTTTATTCTTTCAGCCCAGTTCTTCATCAACAGAAAGCAA GCGGTAGGTTCCTTcaccaaaaaatgtttttttttgttttttttactggA AATATTCTGTAATAGTAATATATGGGACTAATAAACTGGTTTTAAAAATC TTGCGCGTCTTCACAGTCATAGTGAAAAAGGGTAAATTTTCAAACCATCG TATAATTGTAAATATAACTTGCATTACTGTCCCGGGtggttcaaaaaaaa acttcgaacGTTTGTTGGCTTCTTGTAACCGAATAATTTTATTGAACAAC CCTGAAAGTAATTTTATTAGATATCGAGGTATAACTTTTTATATTTGGTT GATTGGTTTTGGATTTATAGCTTTACAAAggcaaaattcacttttcaaaa tgtacaaaaacacgtcaaaaaagAGGGAAGCCAACAAACGTCCGAAGTTT TTTTGAACCATCCGGTAAATACAGTTGACGGTCTCTAATTCGACTATTTG ATAGGCTCCCtcattcgatgaaatttaaagtccccgtcaacaagaaactc tcataaacgacgatTTTCATCGTATAAGCTtccttaaggccggtctccac ttgcgcgcgcttcaatcgctcttcttcgagcaaagcttccacgctattgg tcaaaagaaaaatgaagcaactcccaTTGGTGGGATATGACGTAACGATc gcgcgcttgaaaaaaaagttgaaatacattcaactttttttccaagcGCG CGCTgcgtttttatgacgtaatcttttctccaagcaaaaatgattgaagc caaagttgcgatcgcagcgcgcgatAGTGGAGACCGGGCTTTactcgatg aaaatccaattccccttgaagatcgaattagagagcgtcaactgtatatt atAAATGACACAGCCGACTGACTATCCTTCCTTTCTTCTAGTAAACGAAA CGAATCAGAAGAAGACGACGCTACATCTAAAAAACCTAAAATGGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045235XLOC_045235Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072909-exon-scaffold_86-1491911889:661799..661969TCONS_00072909-exon-scaffold_86-1491911889:661799..661969Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:661799..661969TCONS_00072909-exon-scaffold_86-1510915933:661799..661969Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:661799..661969TCONS_00072909-exon-scaffold_86-1575043694:661799..661969Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:668212..668262TCONS_00072909-exon-scaffold_86-1491911889:668212..668262Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:668212..668262TCONS_00072909-exon-scaffold_86-1510915933:668212..668262Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:668212..668262TCONS_00072909-exon-scaffold_86-1575043694:668212..668262Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:669986..670050TCONS_00072909-exon-scaffold_86-1491911889:669986..670050Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:669986..670050TCONS_00072909-exon-scaffold_86-1510915933:669986..670050Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:669986..670050TCONS_00072909-exon-scaffold_86-1575043694:669986..670050Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:670471..670616TCONS_00072909-exon-scaffold_86-1491911889:670471..670616Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:670471..670616TCONS_00072909-exon-scaffold_86-1510915933:670471..670616Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:670471..670616TCONS_00072909-exon-scaffold_86-1575043694:670471..670616Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:671284..671369TCONS_00072909-exon-scaffold_86-1491911889:671284..671369Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:671284..671369TCONS_00072909-exon-scaffold_86-1510915933:671284..671369Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:671284..671369TCONS_00072909-exon-scaffold_86-1575043694:671284..671369Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:672778..672851TCONS_00072909-exon-scaffold_86-1491911889:672778..672851Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:672778..672851TCONS_00072909-exon-scaffold_86-1510915933:672778..672851Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:672778..672851TCONS_00072909-exon-scaffold_86-1575043694:672778..672851Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:673239..673348TCONS_00072909-exon-scaffold_86-1491911889:673239..673348Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:673239..673348TCONS_00072909-exon-scaffold_86-1510915933:673239..673348Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:673239..673348TCONS_00072909-exon-scaffold_86-1575043694:673239..673348Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:673702..673819TCONS_00072909-exon-scaffold_86-1491911889:673702..673819Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:673702..673819TCONS_00072909-exon-scaffold_86-1510915933:673702..673819Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:673702..673819TCONS_00072909-exon-scaffold_86-1575043694:673702..673819Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:674605..674795TCONS_00072909-exon-scaffold_86-1491911889:674605..674795Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:674605..674795TCONS_00072909-exon-scaffold_86-1510915933:674605..674795Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:674605..674795TCONS_00072909-exon-scaffold_86-1575043694:674605..674795Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:675097..675188TCONS_00072909-exon-scaffold_86-1491911889:675097..675188Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:675097..675188TCONS_00072909-exon-scaffold_86-1510915933:675097..675188Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:675097..675188TCONS_00072909-exon-scaffold_86-1575043694:675097..675188Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:675637..675740TCONS_00072909-exon-scaffold_86-1491911889:675637..675740Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:675637..675740TCONS_00072909-exon-scaffold_86-1510915933:675637..675740Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:675637..675740TCONS_00072909-exon-scaffold_86-1575043694:675637..675740Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1491911889:676940..676995TCONS_00072909-exon-scaffold_86-1491911889:676940..676995Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1510915933:676940..676995TCONS_00072909-exon-scaffold_86-1510915933:676940..676995Clytia hemisphaericaexon
TCONS_00072909-exon-scaffold_86-1575043694:676940..676995TCONS_00072909-exon-scaffold_86-1575043694:676940..676995Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:661799..676995 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.689746 0 0 0 0.695593 0.253378 0.385708 0 0.00415586 0.500662 0 0 0 0.124327 0 0 0 5.94445e-07 0 0 0.210013 0.240409 0.50489 0 0 0 0 0 0 5.01636e-05
Blast
BLAST of TCONS_00072909 vs. Swiss-Prot (Human)
Match: NBN (Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.857e-41
Identity = 107/317 (33.75%), Postives = 163/317 (51.42%), Query Frame = 3
Query:  165 ATGDCYYLLPKRKYVVGRKDCDIVITGDASISRKHCII----EVTELDGPNCTCVI-FTDTSKTGTKINDVKLKSKEETEAHDNSTIAFGKM--KFQLRHQKYLVVPSSIKKSEQKQLLEPVSKLGGRLVKEWNAETTHLVMTKIIFTIKVVYALACGKHIVTPKFFEXXXXXXXXXXXXXXXXEKNYLPVIQEQSMINMNALFYPNQERSQLFVGKIFVTLSATQHSRLKHAIQYSGGSMILQESREQKILKSISTSQTMVMALEGHEERSLSKD-QSKWMKELQNMLSTHGLRGIGESEIGLALINNSLEKYCNP 1091
            A G+ Y LL   +YVVGRK+C I+I  D SISR H ++     VT L   +   V+   D SK GT +N+ K+++           I FG    KF++ ++  +   S +  S +  L + + +LGG  V  W  E THLVM  +  TIK + AL CG+ IV P++F + L   + K        +++ P + E S+ + N      QER Q+F GK F+ L+A QH +L  A+ + GG   L     ++         T V+       ++L  D Q KW++ + +ML   GLR I E+EIGLA+I  + + YC+P
Sbjct:   11 AGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQTDEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEFLKAVESKKQPPQI--ESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSSAVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQGLRPIPEAEIGLAVIFMTTKNYCDP 325          
The following BLAST results are available for this feature:
BLAST of TCONS_00072909 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NBN2.857e-4133.75Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1[more]
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